RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 ZNF610Q8N9Z0 462 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 NEK7Q8TDX7 302 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 STARD4Q96DR4 205 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 TVP23CQ96ET8 276 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 ABHD17AQ96GS6 310 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 C20orf24Q9BUV8 137 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 OR2J1Q9GZK6 312 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 MPC1Q9Y5U8 109 aa9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 PUS1Q9Y606 427 aaKnown RBP eCLIP9.34□□□□□ -0.91
SH3RF1-203ENST00000508685 ITPR1Q14643 2758 aa9.33□□□□□ -0.92
SH3RF1-203ENST00000508685 NPIPB11E5RHQ5 1161 aa9.33□□□□□ -0.92
SH3RF1-203ENST00000508685 TGOLN2O43493 480 aa9.33□□□□□ -0.92
SH3RF1-203ENST00000508685 PGLYRP1O75594 196 aaPredicted RBP9.33□□□□□ -0.92
SH3RF1-203ENST00000508685 CNOT4O95628 575 aaKnown RBP9.33□□□□□ -0.92
SH3RF1-203ENST00000508685 SCTP09683 121 aa9.33□□□□□ -0.92
SH3RF1-203ENST00000508685 F2RP25116 425 aa9.33□□□□□ -0.92
SH3RF1-203ENST00000508685 CXorf66Q5JRM2 361 aaPredicted RBP9.33□□□□□ -0.92
SH3RF1-203ENST00000508685 CXorf67Q86X51 503 aaPredicted RBP9.33□□□□□ -0.92
SH3RF1-203ENST00000508685 NANPQ8TBE9 248 aa9.33□□□□□ -0.92
SH3RF1-203ENST00000508685 OR5P3Q8WZ94 311 aa9.33□□□□□ -0.92
SH3RF1-203ENST00000508685 LSM10Q969L4 123 aaKnown RBP9.33□□□□□ -0.92
SH3RF1-203ENST00000508685 ISOC2Q96AB3 205 aa9.33□□□□□ -0.92
SH3RF1-203ENST00000508685 YPEL4Q96NS1 127 aa9.33□□□□□ -0.92
SH3RF1-203ENST00000508685 OR51M1Q9H341 326 aa9.33□□□□□ -0.92
SH3RF1-203ENST00000508685 PLSCR4Q9NRQ2 329 aa9.33□□□□□ -0.92
SH3RF1-203ENST00000508685 MTCH1Q9NZJ7 389 aa9.33□□□□□ -0.92
SH3RF1-203ENST00000508685 OR2W1Q9Y3N9 320 aa9.33□□□□□ -0.92
SH3RF1-203ENST00000508685 FAM215AQ9Y5M1 114 aa9.33□□□□□ -0.92
SH3RF1-203ENST00000508685 PTPRQQ9UMZ3 2332 aa9.33□□□□□ -0.92
SH3RF1-203ENST00000508685 SHANK1Q9Y566 2161 aa9.33□□□□□ -0.92
SH3RF1-203ENST00000508685 MBD3L4A6NDZ8 208 aaPredicted RBP9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 MBD3L3A6NE82 208 aaPredicted RBP9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 MBD3L5A6NJ08 208 aaPredicted RBP9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 ANKRD30BLA7E2S9 258 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 MKRN2OSH3BPM6 223 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 H3BQ15 152 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 SYNGR1O43759 233 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 CHST1O43916 411 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 SCAF4O95104 1147 aaKnown RBP9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 CGAP01215 116 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 OR8U8P0C7N1 319 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 HOXC12P31275 282 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 MDH2P40926 338 aaKnown RBP9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 CD200P41217 278 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 UCNP55089 124 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 UBE2KP61086 200 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 RPS23P62266 143 aaKnown RBP9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 ZNF880Q6PDB4 577 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 H1FOOQ8IZA3 346 aaPredicted RBP9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 WDR31Q8NA23 367 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 MBD3L2Q8NHZ7 208 aaPredicted RBP9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 MUCL1Q96DR8 90 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 RARRES2Q99969 163 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 NIPSNAP3BQ9BS92 247 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 PKIBQ9C010 78 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 CCL28Q9NRJ3 127 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 TREM2Q9NZC2 230 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 TP53TG5Q9Y2B4 290 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 SSUH2Q9Y2M2 353 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 WSB1Q9Y6I7 421 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 hCG_1809904A0A1W2PP81 198 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 A0A1W2PPE2 198 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 A0A1W2PR64 198 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 A0A1W2PRV1 198 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 DEGS1O15121 323 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 GPR37O15354 613 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 WDR1O75083 606 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 IGKV3-15P01624 115 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 ARG1P05089 322 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 SERPINE2P07093 398 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 FABP1P07148 127 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 DAOP14920 347 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 OMGP23515 440 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 TAGLN2P37802 199 aaKnown RBP9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 PPP1CBP62140 327 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 PNRC1Q12796 327 aaPredicted RBP9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 ALKBH6Q3KRA9 238 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 INO80CQ6PI98 192 aaPredicted RBP9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 MOB1BQ7L9L4 216 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 ZNF429Q86V71 674 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 OR13D1Q8NGV5 346 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 OR10J5Q8NHC4 309 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 PLPPR1Q8TBJ4 325 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 SCGB1C1Q8TD33 95 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 TMEM171Q8WVE6 324 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 ZNF488Q96MN9 340 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 PSMG3Q9BT73 122 aaPredicted RBP9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 CABLES2Q9BTV7 478 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 CDH20Q9HBT6 801 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 PROCRQ9UNN8 238 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 RNF115Q9Y4L5 304 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 ARID1AO14497 2285 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 CHD6Q8TD26 2715 aa9.32□□□□□ -0.92
SH3RF1-203ENST00000508685 IGHV3-64DA0A0J9YX35 117 aa9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 HSD17B6O14756 317 aa9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 TXNL1O43396 289 aa9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 TMPRSS3P57727 454 aa9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 MRPL49Q13405 166 aaKnown RBP9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 HERPUD1Q15011 391 aa9.31□□□□□ -0.92
SH3RF1-203ENST00000508685 CLDND2Q8NHS1 167 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms