RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 FABP7O15540 132 aa12.08□□□□□ -0.48
RNF4-210ENST00000508235 NDUFA7O95182 113 aa12.08□□□□□ -0.48
RNF4-210ENST00000508235 SCTP09683 121 aa12.08□□□□□ -0.48
RNF4-210ENST00000508235 FAM106CPP0CH98 169 aa12.08□□□□□ -0.48
RNF4-210ENST00000508235 ZNF182P17025 639 aaPredicted RBP12.08□□□□□ -0.48
RNF4-210ENST00000508235 PPP1CCP36873 323 aaKnown RBP12.08□□□□□ -0.48
RNF4-210ENST00000508235 COMPP49747 757 aaPredicted RBP12.08□□□□□ -0.48
RNF4-210ENST00000508235 RAB13P51153 203 aa12.08□□□□□ -0.48
RNF4-210ENST00000508235 ZNF137PP52743 207 aa12.08□□□□□ -0.48
RNF4-210ENST00000508235 GNMTQ14749 295 aa12.08□□□□□ -0.48
RNF4-210ENST00000508235 LY6EQ16553 131 aa12.08□□□□□ -0.48
RNF4-210ENST00000508235 CT45A1Q5HYN5 189 aa12.08□□□□□ -0.48
RNF4-210ENST00000508235 Q6ZS49 121 aa12.08□□□□□ -0.48
RNF4-210ENST00000508235 CT45A3Q8NHU0 189 aa12.08□□□□□ -0.48
RNF4-210ENST00000508235 EDARADDQ8WWZ3 215 aa12.08□□□□□ -0.48
RNF4-210ENST00000508235 GHITMQ9H3K2 345 aa12.08□□□□□ -0.48
RNF4-210ENST00000508235 C1RLQ9NZP8 487 aa12.08□□□□□ -0.48
RNF4-210ENST00000508235 SMIM31A0A1B0GVY4 71 aa12.07□□□□□ -0.48
RNF4-210ENST00000508235 TMEM235A6NFC5 223 aa12.07□□□□□ -0.48
RNF4-210ENST00000508235 ITGB1BP1O14713 200 aa12.07□□□□□ -0.48
RNF4-210ENST00000508235 XRCC3O43542 346 aa12.07□□□□□ -0.48
RNF4-210ENST00000508235 ZNF134P52741 427 aa12.07□□□□□ -0.48
RNF4-210ENST00000508235 RAG2P55895 527 aa12.07□□□□□ -0.48
RNF4-210ENST00000508235 C12orf54Q6X4T0 127 aa12.07□□□□□ -0.48
RNF4-210ENST00000508235 C16orf82Q7Z2V1 217 aa12.07□□□□□ -0.48
RNF4-210ENST00000508235 LYG1Q8N1E2 194 aa12.07□□□□□ -0.48
RNF4-210ENST00000508235 OR10J5Q8NHC4 309 aa12.07□□□□□ -0.48
RNF4-210ENST00000508235 AKR1E2Q96JD6 320 aa12.07□□□□□ -0.48
RNF4-210ENST00000508235 NPFFR1Q9GZQ6 430 aa12.07□□□□□ -0.48
RNF4-210ENST00000508235 COMMD3Q9UBI1 195 aa12.07□□□□□ -0.48
RNF4-210ENST00000508235 CUBNO60494 3623 aa12.06□□□□□ -0.48
RNF4-210ENST00000508235 A0A1W2PPI3 338 aa12.06□□□□□ -0.48
RNF4-210ENST00000508235 A6NDX4 124 aa12.06□□□□□ -0.48
RNF4-210ENST00000508235 SLC31A2O15432 143 aa12.06□□□□□ -0.48
RNF4-210ENST00000508235 LANCL1O43813 399 aa12.06□□□□□ -0.48
RNF4-210ENST00000508235 APOA1P02647 267 aa12.06□□□□□ -0.48
RNF4-210ENST00000508235 CEACAM6P40199 344 aa12.06□□□□□ -0.48
RNF4-210ENST00000508235 TMEM69Q5SWH9 247 aa12.06□□□□□ -0.48
RNF4-210ENST00000508235 FAM53AQ6NSI3 398 aaPredicted RBP12.06□□□□□ -0.48
RNF4-210ENST00000508235 THNSL2Q86YJ6 484 aa12.06□□□□□ -0.48
RNF4-210ENST00000508235 CAPSLQ8WWF8 208 aa12.06□□□□□ -0.48
RNF4-210ENST00000508235 RTN4IP1Q8WWV3 396 aaPredicted RBP12.06□□□□□ -0.48
RNF4-210ENST00000508235 ST6GALNAC6Q969X2 333 aa12.06□□□□□ -0.48
RNF4-210ENST00000508235 CABLES2Q9BTV7 478 aa12.06□□□□□ -0.48
RNF4-210ENST00000508235 ST6GALNAC5Q9BVH7 336 aa12.06□□□□□ -0.48
RNF4-210ENST00000508235 RANBP3Q9H6Z4 567 aaPredicted RBP12.06□□□□□ -0.48
RNF4-210ENST00000508235 BEX1Q9HBH7 125 aa12.06□□□□□ -0.48
RNF4-210ENST00000508235 PIPOXQ9P0Z9 390 aa12.06□□□□□ -0.48
RNF4-210ENST00000508235 ZNF230Q9UIE0 474 aaPredicted RBP12.06□□□□□ -0.48
RNF4-210ENST00000508235 MMP24Q9Y5R2 645 aa12.06□□□□□ -0.48
RNF4-210ENST00000508235 IGHV1-3A0A0C4DH29 117 aa12.05□□□□□ -0.48
RNF4-210ENST00000508235 TIMM23O14925 209 aa12.05□□□□□ -0.48
RNF4-210ENST00000508235 RAB29O14966 203 aa12.05□□□□□ -0.48
RNF4-210ENST00000508235 CTXN2P0C2S0 81 aa12.05□□□□□ -0.48
RNF4-210ENST00000508235 CBX5P45973 191 aa12.05□□□□□ -0.48
RNF4-210ENST00000508235 AWAT1Q58HT5 328 aa12.05□□□□□ -0.48
RNF4-210ENST00000508235 FAM71F2Q6NXP2 309 aa12.05□□□□□ -0.48
RNF4-210ENST00000508235 C5orf24Q7Z6I8 188 aa12.05□□□□□ -0.48
RNF4-210ENST00000508235 MOB3BQ86TA1 216 aa12.05□□□□□ -0.48
RNF4-210ENST00000508235 TGIF2LXQ8IUE1 241 aa12.05□□□□□ -0.48
RNF4-210ENST00000508235 OR4C13Q8NGP0 309 aa12.05□□□□□ -0.48
RNF4-210ENST00000508235 NUDCD2Q8WVJ2 157 aa12.05□□□□□ -0.48
RNF4-210ENST00000508235 TOLLIPQ9H0E2 274 aa12.05□□□□□ -0.48
RNF4-210ENST00000508235 AUNIPQ9H7T9 357 aa12.05□□□□□ -0.48
RNF4-210ENST00000508235 OR1A1Q9P1Q5 309 aa12.05□□□□□ -0.48
RNF4-210ENST00000508235 ELF5Q9UKW6 265 aaPredicted RBP12.05□□□□□ -0.48
RNF4-210ENST00000508235 ATRQ13535 2644 aa12.04□□□□□ -0.48
RNF4-210ENST00000508235 FAM90A9PA6NNJ1 464 aa12.04□□□□□ -0.48
RNF4-210ENST00000508235 M0QZK8 103 aa12.04□□□□□ -0.48
RNF4-210ENST00000508235 BET1O15155 118 aa12.04□□□□□ -0.48
RNF4-210ENST00000508235 TSPAN9O75954 239 aa12.04□□□□□ -0.48
RNF4-210ENST00000508235 GSTT2P0CG29 244 aa12.04□□□□□ -0.48
RNF4-210ENST00000508235 GSTT2BP0CG30 244 aa12.04□□□□□ -0.48
RNF4-210ENST00000508235 RELBQ01201 579 aa12.04□□□□□ -0.48
RNF4-210ENST00000508235 DIAPH2-AS1Q14236 149 aa12.04□□□□□ -0.48
RNF4-210ENST00000508235 HABP2Q14520 560 aaPredicted RBP12.04□□□□□ -0.48
RNF4-210ENST00000508235 SPCS2Q15005 226 aa12.04□□□□□ -0.48
RNF4-210ENST00000508235 CCBE1Q6UXH8 406 aaPredicted RBP12.04□□□□□ -0.48
RNF4-210ENST00000508235 IZUMO1Q8IYV9 350 aa12.04□□□□□ -0.48
RNF4-210ENST00000508235 DRAM1Q8N682 238 aa12.04□□□□□ -0.48
RNF4-210ENST00000508235 OR56B4Q8NH76 319 aa12.04□□□□□ -0.48
RNF4-210ENST00000508235 MAFIPQ8WZ33 124 aa12.04□□□□□ -0.48
RNF4-210ENST00000508235 CFHR4Q92496 578 aa12.04□□□□□ -0.48
RNF4-210ENST00000508235 ISOC1Q96CN7 298 aa12.04□□□□□ -0.48
RNF4-210ENST00000508235 S1PR3Q99500 378 aa12.04□□□□□ -0.48
RNF4-210ENST00000508235 GINS4Q9BRT9 223 aa12.04□□□□□ -0.48
RNF4-210ENST00000508235 IFI27L2Q9H2X8 130 aa12.04□□□□□ -0.48
RNF4-210ENST00000508235 C16orf95Q9H693 158 aa12.04□□□□□ -0.48
RNF4-210ENST00000508235 TRBV6-7A0A0A0MS04 114 aa12.03□□□□□ -0.48
RNF4-210ENST00000508235 IGKV1-6A0A0C4DH72 117 aa12.03□□□□□ -0.48
RNF4-210ENST00000508235 CCDC160A6NGH7 325 aa12.03□□□□□ -0.48
RNF4-210ENST00000508235 CHST1O43916 411 aa12.03□□□□□ -0.48
RNF4-210ENST00000508235 SSX5O60225 188 aa12.03□□□□□ -0.48
RNF4-210ENST00000508235 HPGDSO60760 199 aa12.03□□□□□ -0.48
RNF4-210ENST00000508235 OR2F2O95006 317 aa12.03□□□□□ -0.48
RNF4-210ENST00000508235 SNRNP70P08621 437 aaKnown RBP12.03□□□□□ -0.48
RNF4-210ENST00000508235 CD1BP29016 333 aa12.03□□□□□ -0.48
RNF4-210ENST00000508235 REG1BP48304 166 aa12.03□□□□□ -0.48
RNF4-210ENST00000508235 TAS2R20P59543 309 aa12.03□□□□□ -0.48
RNF4-210ENST00000508235 HES1Q14469 280 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms