RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.09■□□□□ 0.01
NUP54-205ENST00000507257 SLC25A45Q8N413 288 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 KCNE4Q8WWG9 221 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 TMEM37Q8WXS4 190 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 ELOVL1Q9BW60 279 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 FGF23Q9GZV9 251 aaPredicted RBP15.09■□□□□ 0.01
NUP54-205ENST00000507257 UBE2ZQ9H832 354 aaPredicted RBP15.09■□□□□ 0.01
NUP54-205ENST00000507257 TMEM9BQ9NQ34 198 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 LIN7CQ9NUP9 197 aaKnown RBP15.09■□□□□ 0.01
NUP54-205ENST00000507257 FKBP11Q9NYL4 201 aa15.09■□□□□ 0.01
NUP54-205ENST00000507257 TRAPPC2LH3BP13 241 aa15.08■□□□□ 0
NUP54-205ENST00000507257 PATE4P0C8F1 98 aa15.08■□□□□ 0
NUP54-205ENST00000507257 CCL3P10147 92 aa15.08■□□□□ 0
NUP54-205ENST00000507257 COX5BP10606 129 aa15.08■□□□□ 0
NUP54-205ENST00000507257 OR10J1P30954 320 aa15.08■□□□□ 0
NUP54-205ENST00000507257 RPL15P61313 204 aaKnown RBP15.08■□□□□ 0
NUP54-205ENST00000507257 DCAF10Q5QP82 559 aa15.08■□□□□ 0
NUP54-205ENST00000507257 TEX38Q6PEX7 206 aa15.08■□□□□ 0
NUP54-205ENST00000507257 TMEM144Q7Z5S9 345 aa15.08■□□□□ 0
NUP54-205ENST00000507257 OR51H1Q8NH63 302 aa15.08■□□□□ 0
NUP54-205ENST00000507257 FGFBP3Q8TAT2 258 aa15.08■□□□□ 0
NUP54-205ENST00000507257 NEK7Q8TDX7 302 aa15.08■□□□□ 0
NUP54-205ENST00000507257 NEIL1Q96FI4 390 aaPredicted RBP15.08■□□□□ 0
NUP54-205ENST00000507257 MTCH1Q9NZJ7 389 aa15.08■□□□□ 0
NUP54-205ENST00000507257 MLNRO43193 412 aa15.07■□□□□ 0
NUP54-205ENST00000507257 ELLP55199 621 aaPredicted RBP15.07■□□□□ 0
NUP54-205ENST00000507257 B3GALT5-AS1P59052 145 aa15.07■□□□□ 0
NUP54-205ENST00000507257 GAGE1Q13065 139 aa15.07■□□□□ 0
NUP54-205ENST00000507257 CEACAM16Q2WEN9 425 aa15.07■□□□□ 0
NUP54-205ENST00000507257 ZDHHC23Q8IYP9 409 aa15.07■□□□□ 0
NUP54-205ENST00000507257 OR56B2PQ8NGI1 322 aa15.07■□□□□ 0
NUP54-205ENST00000507257 ALKBH3Q96Q83 286 aaPredicted RBP15.07■□□□□ 0
NUP54-205ENST00000507257 WDR54Q9H977 334 aa15.07■□□□□ 0
NUP54-205ENST00000507257 TMPRSS2O15393 492 aa15.07■□□□□ 0
NUP54-205ENST00000507257 IGLV2-14P01704 120 aa15.07■□□□□ 0
NUP54-205ENST00000507257 SFTPCP11686 197 aa15.07■□□□□ 0
NUP54-205ENST00000507257 TMEM249Q2WGJ8 235 aa15.07■□□□□ 0
NUP54-205ENST00000507257 MOB1BQ7L9L4 216 aa15.07■□□□□ 0
NUP54-205ENST00000507257 CHODLQ9H9P2 273 aa15.07■□□□□ 0
NUP54-205ENST00000507257 GPR35Q9HC97 309 aa15.07■□□□□ 0
NUP54-205ENST00000507257 ERRFI1Q9UJM3 462 aaPredicted RBP15.07■□□□□ 0
NUP54-205ENST00000507257 POLR3KQ9Y2Y1 108 aaPredicted RBP15.07■□□□□ 0
NUP54-205ENST00000507257 UBE2L5PA0A1B0GUS4 154 aa15.06■□□□□ 0
NUP54-205ENST00000507257 UBE2NP61088 152 aaKnown RBP15.06■□□□□ 0
NUP54-205ENST00000507257 GNB2P62879 340 aa15.06■□□□□ 0
NUP54-205ENST00000507257 FOXL1Q12952 345 aa15.06■□□□□ 0
NUP54-205ENST00000507257 ZNF585BQ52M93 769 aa15.06■□□□□ 0
NUP54-205ENST00000507257 ACSM6Q6P461 480 aa15.06■□□□□ 0
NUP54-205ENST00000507257 OR5A2Q8NGI9 324 aa15.06■□□□□ 0
NUP54-205ENST00000507257 HS3ST6Q96QI5 342 aa15.06■□□□□ 0
NUP54-205ENST00000507257 TMEM147Q9BVK8 224 aa15.06■□□□□ 0
NUP54-205ENST00000507257 NAGKQ9UJ70 344 aa15.06■□□□□ 0
NUP54-205ENST00000507257 SRD5A2P31213 254 aa15.05■□□□□ 0
NUP54-205ENST00000507257 IZUMO4Q1ZYL8 232 aa15.05■□□□□ 0
NUP54-205ENST00000507257 C20orf204Q6ZNR8 217 aa15.05■□□□□ 0
NUP54-205ENST00000507257 OR4F5Q8NH21 305 aa15.05■□□□□ 0
NUP54-205ENST00000507257 PSMF1Q92530 271 aa15.05■□□□□ 0
NUP54-205ENST00000507257 WDYHV1Q96HA8 205 aa15.05■□□□□ 0
NUP54-205ENST00000507257 IMMP1LQ96LU5 166 aa15.05■□□□□ 0
NUP54-205ENST00000507257 OR4F4Q96R69 305 aa15.05■□□□□ 0
NUP54-205ENST00000507257 PXMP4Q9Y6I8 212 aa15.05■□□□□ 0
NUP54-205ENST00000507257 SERPINA7P05543 415 aa15.05■□□□□ -0
NUP54-205ENST00000507257 IL3RAP26951 378 aa15.05■□□□□ -0
NUP54-205ENST00000507257 SSR4P51571 173 aa15.05■□□□□ -0
NUP54-205ENST00000507257 RTP5Q14D33 572 aa15.05■□□□□ -0
NUP54-205ENST00000507257 SPANXN5Q5MJ07 72 aa15.05■□□□□ -0
NUP54-205ENST00000507257 ZNF468Q5VIY5 522 aaPredicted RBP15.05■□□□□ -0
NUP54-205ENST00000507257 GGNQ86UU5 652 aa15.05■□□□□ -0
NUP54-205ENST00000507257 IGHV1-45A0A0A0MS14 117 aa15.04■□□□□ -0
NUP54-205ENST00000507257 SS18L1O75177 396 aaPredicted RBP15.04■□□□□ -0
NUP54-205ENST00000507257 MYF5P13349 255 aa15.04■□□□□ -0
NUP54-205ENST00000507257 COX5AP20674 150 aa15.04■□□□□ -0
NUP54-205ENST00000507257 GPM6AP51674 278 aa15.04■□□□□ -0
NUP54-205ENST00000507257 CASP6P55212 293 aa15.04■□□□□ -0
NUP54-205ENST00000507257 CARD18P57730 90 aa15.04■□□□□ -0
NUP54-205ENST00000507257 TESK1Q15569 626 aa15.04■□□□□ -0
NUP54-205ENST00000507257 ZNF573Q86YE8 665 aa15.04■□□□□ -0
NUP54-205ENST00000507257 BATF2Q8N1L9 274 aa15.04■□□□□ -0
NUP54-205ENST00000507257 C20orf144Q9BQM9 153 aa15.04■□□□□ -0
NUP54-205ENST00000507257 CBLN4Q9NTU7 201 aa15.04■□□□□ -0
NUP54-205ENST00000507257 IL36RNQ9UBH0 155 aa15.04■□□□□ -0
NUP54-205ENST00000507257 HSPB7Q9UBY9 170 aa15.04■□□□□ -0
NUP54-205ENST00000507257 ASCC3Q8N3C0 2202 aaKnown RBP15.04■□□□□ -0
NUP54-205ENST00000507257 TRAV24A0A0B4J272 114 aa15.04■□□□□ -0
NUP54-205ENST00000507257 RNF212BA8MTL3 300 aa15.04■□□□□ -0
NUP54-205ENST00000507257 C2CD4DB7Z1M9 353 aa15.04■□□□□ -0
NUP54-205ENST00000507257 PPP1CBP62140 327 aa15.04■□□□□ -0
NUP54-205ENST00000507257 VWC2Q2TAL6 325 aa15.04■□□□□ -0
NUP54-205ENST00000507257 SMRP1Q8NCR6 262 aa15.04■□□□□ -0
NUP54-205ENST00000507257 CPEB3Q8NE35 698 aaKnown RBP15.04■□□□□ -0
NUP54-205ENST00000507257 OR10G9Q8NGN4 311 aa15.04■□□□□ -0
NUP54-205ENST00000507257 OR10G7Q8NGN6 311 aa15.04■□□□□ -0
NUP54-205ENST00000507257 TMEM45BQ96B21 275 aa15.04■□□□□ -0
NUP54-205ENST00000507257 DIRC2Q96SL1 478 aa15.04■□□□□ -0
NUP54-205ENST00000507257 ATG101Q9BSB4 218 aa15.04■□□□□ -0
NUP54-205ENST00000507257 CEP192Q8TEP8 1941 aa15.03■□□□□ -0
NUP54-205ENST00000507257 MYO9BQ13459 2157 aa15.03■□□□□ -0
NUP54-205ENST00000507257 PDE6DO43924 150 aa15.03■□□□□ -0
NUP54-205ENST00000507257 SOX15O60248 233 aa15.03■□□□□ -0
NUP54-205ENST00000507257 SCGB1D1O95968 90 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms