RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 FAM90A24PP0C7X0 464 aa14□□□□□ -0.17
HMGXB3-202ENST00000503427 C1orf185Q5T7R7 199 aa14□□□□□ -0.17
HMGXB3-202ENST00000503427 OR1K1Q8NGR3 316 aa14□□□□□ -0.17
HMGXB3-202ENST00000503427 AGFG2O95081 481 aa14□□□□□ -0.17
HMGXB3-202ENST00000503427 TCL1AP56279 114 aa14□□□□□ -0.17
HMGXB3-202ENST00000503427 TMEM255AQ5JRV8 349 aa14□□□□□ -0.17
HMGXB3-202ENST00000503427 TGIF2LXQ8IUE1 241 aa14□□□□□ -0.17
HMGXB3-202ENST00000503427 PUSL1Q8N0Z8 303 aaKnown RBP14□□□□□ -0.17
HMGXB3-202ENST00000503427 STXBP6Q8NFX7 210 aa14□□□□□ -0.17
HMGXB3-202ENST00000503427 OR11H4Q8NGC9 324 aa14□□□□□ -0.17
HMGXB3-202ENST00000503427 OR1L6Q8NGR2 347 aa14□□□□□ -0.17
HMGXB3-202ENST00000503427 SAP30LQ9HAJ7 183 aa14□□□□□ -0.17
HMGXB3-202ENST00000503427 LINC01590Q5TEZ4 76 aa14□□□□□ -0.17
HMGXB3-202ENST00000503427 OR5AU1Q8NGC0 362 aa14□□□□□ -0.17
HMGXB3-202ENST00000503427 AQP10Q96PS8 301 aa14□□□□□ -0.17
HMGXB3-202ENST00000503427 NUDT16L1Q9BRJ7 211 aaKnown RBP14□□□□□ -0.17
HMGXB3-202ENST00000503427 TMEM191AQ9H0A3 160 aa14□□□□□ -0.17
HMGXB3-202ENST00000503427 MS4A18H0YCH9 400 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 AESQ08117 197 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 MS4A18Q3C1V0 323 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 NSUN5P2Q63ZY6 315 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 OR52L2PQ8NGH6 319 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 ZDHHC16Q969W1 377 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 TDRD6O60522 2096 aaKnown RBP13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 NKX2-8O15522 239 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 SRSF10O75494 262 aaKnown RBP13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 SRD5A3Q9H8P0 318 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 FAM206AQ9NX38 181 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 IGSF23A1L1A6 192 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 FLYWCH2Q96CP2 140 aaKnown RBP13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 TUBD1Q9UJT1 453 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 IGKV1D-42A0A075B6H8 117 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 PRR33A8MZF0 331 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 TCAPO15273 167 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 FAM87AP0C7U9 286 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 PRF1P14222 555 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 H2BFSP57053 126 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 IGSF11Q5DX21 431 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 RIPPLY2Q5TAB7 128 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 TGIF2LYQ8IUE0 185 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 CYB561D1Q8N8Q1 229 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 MARVELD3Q96A59 401 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 GRAMD2BQ96HH9 432 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 OR2J1Q9GZK6 312 aa13.99□□□□□ -0.17
HMGXB3-202ENST00000503427 CDX4O14627 284 aaPredicted RBP13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 P01737 135 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 ACP1P24666 158 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 OR10J1P30954 320 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 HIST3H3Q16695 136 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 SMUG1Q53HV7 270 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 Q6ZN92 141 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 RUNX1Q01196 453 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 TMEM97Q5BJF2 176 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 ZNF383Q8NA42 475 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 ABHD14AQ9BUJ0 271 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 HSF4Q9ULV5 492 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 LHFPL6Q9Y693 200 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 M0QZK8 103 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 GGCTO75223 188 aaKnown RBP13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 FAM3BP58499 235 aaPredicted RBP13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 RAB24Q969Q5 203 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 HARBI1Q96MB7 349 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 ZNF488Q96MN9 340 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 CLN8Q9UBY8 286 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 CCDC88CQ9P219 2028 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 HPRT1P00492 218 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 HKR1P10072 659 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 NHLRC3Q5JS37 347 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 C10orf113Q5VZT2 155 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 ASCL5Q7RTU5 278 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 OR1L8Q8NGR8 309 aa13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 SDHCQ99643 169 aaPredicted RBP13.98□□□□□ -0.17
HMGXB3-202ENST00000503427 LMX1BO60663 402 aa13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 OR4A8P0C604 315 aa13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 HOXB1P14653 301 aaPredicted RBP13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 PPP1CCP36873 323 aaKnown RBP13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 PKIAP61925 76 aa13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 PERPQ96FX8 193 aa13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 DHRS7CA6NNS2 312 aa13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 BMPR1BO00238 502 aa13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 HSPB1P04792 205 aaKnown RBP13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 CD1BP29016 333 aa13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 OR4X1Q8NH49 305 aa13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 NPIPB13A6NJU9 1138 aa13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 NPIPB4C9JG80 1138 aa13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 OR2A4O95047 310 aa13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 CYB5R3P00387 301 aaPredicted RBP13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 CD74P04233 296 aa13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 GAMTQ14353 236 aa13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 OR2A7Q96R45 310 aa13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 TMEM204Q9BSN7 226 aa13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 G6PC2Q9NQR9 355 aa13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 RP1P56715 2156 aa13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 KLF4O43474 513 aa13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 GOSR1O95249 250 aa13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 ID4P47928 161 aa13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 ZNF441Q8N8Z8 693 aa13.97□□□□□ -0.17
HMGXB3-202ENST00000503427 COL8A1P27658 744 aa13.96□□□□□ -0.17
HMGXB3-202ENST00000503427 LBHQ53QV2 105 aaPredicted RBP13.96□□□□□ -0.17
HMGXB3-202ENST00000503427 MRPL54Q6P161 138 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms