RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	HOGA1	Q86XE5	327 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525		Q8N6K4	173 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	SIGLECL1	Q8N7X8	197 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	SAMD12	Q8N8I0	201 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR2AK2	Q8NG84	335 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR5AN1	Q8NGI8	311 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR4F5	Q8NH21	305 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR4K15	Q8NH41	348 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	GPX8	Q8TED1	209 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	GIMAP1	Q8WWP7	306 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	WFDC12	Q8WWY7	111 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	CFHR4	Q92496	578 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	ZDHHC16	Q969W1	377 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	RPE	Q96AT9	228 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	DGCR14	Q96DF8	476 aa	Known RBP	4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	ADTRP	Q96IZ2	230 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	S1PR3	Q99500	378 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	SSX3	Q99909	188 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	NPFFR1	Q9GZQ6	430 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	ATG5	Q9H1Y0	275 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	ESM1	Q9NQ30	184 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR2S2	Q9NQN1	319 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	TAS2R8	Q9NYW2	309 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	ZNF581	Q9P0T4	197 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	GNG12	Q9UBI6	72 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	RSL24D1	Q9UHA3	163 aa	Known RBP	4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	ANXA10	Q9UJ72	324 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	RBMX2	Q9Y388	322 aa	Known RBP	4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	CEPT1	Q9Y6K0	416 aa		4.1	□□□□□ -1.75
HDAC6-223	ENST00000480525	TENM1	Q9UKZ4	2725 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	PIGBOS1	A0A0B4J2F0	54 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	IGHV1-3	A0A0C4DH29	117 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	UBE2QL1	A1L167	161 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	GABARAP	H6UMI1	98 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	HSPB6	O14558	160 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	RBFOX2	O43251	390 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	HOXA3	O43365	443 aa	Predicted RBP	4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	GSTZ1	O43708	216 aa	Predicted RBP	4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	B3GALNT1	O75752	331 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	BRI3	O95415	125 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	HLA-DQB1	P01920	261 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	CLEC2L	P0C7M8	214 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	RRAS	P10301	218 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	SNRPB	P14678	240 aa	Known RBP	4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	GNB3	P16520	340 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	SLC6A1	P30531	599 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	PRSS3	P35030	304 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	GDNF	P39905	211 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	ECI1	P42126	302 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	CRIP2	P52943	208 aa	Predicted RBP	4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	ARPC4	P59998	168 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	MXD1	Q05195	221 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	KLRD1	Q13241	179 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	ARFRP1	Q13795	201 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	HERPUD1	Q15011	391 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	CDNF	Q49AH0	187 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	CT45A1	Q5HYN5	189 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	VAX1	Q5SQQ9	334 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	LDLRAD2	Q5SZI1	272 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	DHRS7B	Q6IAN0	325 aa	Predicted RBP	4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	PYHIN1	Q6K0P9	492 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	IL17REL	Q6ZVW7	336 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	PDPN	Q86YL7	162 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	TGIF2LX	Q8IUE1	241 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	CLVS1	Q8IUQ0	354 aa	Predicted RBP	4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	ODF3L1	Q8IXM7	274 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	H1FOO	Q8IZA3	346 aa	Predicted RBP	4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	BCL6B	Q8N143	479 aa	Predicted RBP	4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	BATF2	Q8N1L9	274 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	ARRDC1	Q8N5I2	433 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	BEST4	Q8NFU0	473 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR5AP2	Q8NGF4	316 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR5H6	Q8NGV6	325 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR10X1	Q8NGY0	326 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR10J5	Q8NHC4	309 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	CT45A3	Q8NHU0	189 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	WIPF2	Q8TF74	440 aa	Predicted RBP	4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	SMIM4	Q8WVI0	70 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	TOMM40L	Q969M1	308 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	RBM14	Q96PK6	669 aa	Known RBP	4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	SOST	Q9BQB4	213 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	ZNF251	Q9BRH9	671 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	CHIA	Q9BZP6	476 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	IFI27L2	Q9H2X8	130 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	OCEL1	Q9H607	264 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	RNF167	Q9H6Y7	350 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	CHMP1A	Q9HD42	196 aa	Predicted RBP	4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	BATF3	Q9NR55	127 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	ABCB10	Q9NRK6	738 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	LIN7C	Q9NUP9	197 aa	Known RBP	4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	C1RL	Q9NZP8	487 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	MTFP1	Q9UDX5	166 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR2W1	Q9Y3N9	320 aa		4.09	□□□□□ -1.75
HDAC6-223	ENST00000480525	WNK1	Q9H4A3	2382 aa		4.09	□□□□□ -1.76
HDAC6-223	ENST00000480525	SAA2-SAA4	A0A096LPE2	208 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	IGKV1-6	A0A0C4DH72	117 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	CLPSL1	A2RUU4	121 aa		4.08	□□□□□ -1.76
HDAC6-223	ENST00000480525	TMEM235	A6NFC5	223 aa		4.08	□□□□□ -1.76

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