RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 MS4A10Q96PG2 267 aa11.11□□□□□ -0.63
CCNL1-216ENST00000475298 ZNF665Q9H7R5 613 aa11.11□□□□□ -0.63
CCNL1-216ENST00000475298 PPIAL4AQ9Y536 164 aa11.11□□□□□ -0.63
CCNL1-216ENST00000475298 IGKV1-12A0A0C4DH73 117 aa11.1□□□□□ -0.63
CCNL1-216ENST00000475298 OR6C6A6NF89 314 aa11.1□□□□□ -0.63
CCNL1-216ENST00000475298 IGKV1D-12P01611 117 aa11.1□□□□□ -0.63
CCNL1-216ENST00000475298 GALR1P47211 349 aa11.1□□□□□ -0.63
CCNL1-216ENST00000475298 CNN1P51911 297 aaKnown RBP11.1□□□□□ -0.63
CCNL1-216ENST00000475298 ZNF92Q03936 586 aa11.1□□□□□ -0.63
CCNL1-216ENST00000475298 PRDX4Q13162 271 aa11.1□□□□□ -0.63
CCNL1-216ENST00000475298 EIF3IQ13347 325 aaKnown RBP11.1□□□□□ -0.63
CCNL1-216ENST00000475298 ACOT6Q3I5F7 207 aaPredicted RBP11.1□□□□□ -0.63
CCNL1-216ENST00000475298 C9orf135Q5VTT2 229 aa11.1□□□□□ -0.63
CCNL1-216ENST00000475298 LIAT1Q6ZQX7 453 aa11.1□□□□□ -0.63
CCNL1-216ENST00000475298 OR5C1Q8NGR4 320 aa11.1□□□□□ -0.63
CCNL1-216ENST00000475298 OR2V1Q8NHB1 315 aa11.1□□□□□ -0.63
CCNL1-216ENST00000475298 KCNE4Q8WWG9 221 aa11.1□□□□□ -0.63
CCNL1-216ENST00000475298 SLC35E1Q96K37 410 aa11.1□□□□□ -0.63
CCNL1-216ENST00000475298 TP53RKQ96S44 253 aa11.1□□□□□ -0.63
CCNL1-216ENST00000475298 GSX1Q9H4S2 264 aaPredicted RBP11.1□□□□□ -0.63
CCNL1-216ENST00000475298 SRYQ05066 204 aa11.1□□□□□ -0.63
CCNL1-216ENST00000475298 IL24Q13007 206 aa11.1□□□□□ -0.63
CCNL1-216ENST00000475298 GNMTQ14749 295 aa11.1□□□□□ -0.63
CCNL1-216ENST00000475298 TPTE2P1Q5T6R2 138 aa11.1□□□□□ -0.63
CCNL1-216ENST00000475298 C6orf15Q6UXA7 325 aaPredicted RBP11.1□□□□□ -0.63
CCNL1-216ENST00000475298 LGI3Q8N145 548 aa11.1□□□□□ -0.63
CCNL1-216ENST00000475298 CPT1CQ8TCG5 803 aa11.1□□□□□ -0.63
CCNL1-216ENST00000475298 RTN4IP1Q8WWV3 396 aaPredicted RBP11.1□□□□□ -0.63
CCNL1-216ENST00000475298 PSMF1Q92530 271 aa11.1□□□□□ -0.63
CCNL1-216ENST00000475298 GNPNAT1Q96EK6 184 aaPredicted RBP11.1□□□□□ -0.63
CCNL1-216ENST00000475298 HES7Q9BYE0 225 aa11.1□□□□□ -0.63
CCNL1-216ENST00000475298 OR2H1Q9GZK4 316 aa11.1□□□□□ -0.63
CCNL1-216ENST00000475298 OR6C3Q9NZP0 311 aa11.1□□□□□ -0.63
CCNL1-216ENST00000475298 CELA3AP09093 270 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 TMEM11P17152 192 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 CYB561P49447 251 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 DYNLT3P51808 116 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 KLF3P57682 345 aaPredicted RBP11.09□□□□□ -0.63
CCNL1-216ENST00000475298 ADIRFQ15847 76 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 RIPPLY2Q5TAB7 128 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 LYG1Q8N1E2 194 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 TMEM252Q8N6L7 170 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 SPSB1Q96BD6 273 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 C10orf35Q96D05 121 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 BORCS8Q96FH0 119 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 RNF150Q9ULK6 438 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 DNPH1O43598 174 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 LILRA1O75019 489 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 NRASP01111 189 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 ZXDAP98168 799 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 TOMM20LQ6UXN7 152 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 DPPA3Q6W0C5 159 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 STPG4Q8N801 248 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 OR1L6Q8NGR2 347 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 TOMM40LQ969M1 308 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 FAM122AQ96E09 287 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 RBKSQ9H477 322 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 NCOR1P1Q9H4R4 102 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 Q9N2K0 584 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 ANXA10Q9UJ72 324 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 PAM16Q9Y3D7 125 aa11.09□□□□□ -0.63
CCNL1-216ENST00000475298 ZNF407Q9C0G0 2248 aa11.08□□□□□ -0.64
CCNL1-216ENST00000475298 LOC105371242A0A075B767 164 aa11.08□□□□□ -0.64
CCNL1-216ENST00000475298 IGHEP01854 428 aa11.08□□□□□ -0.64
CCNL1-216ENST00000475298 H1FOOQ8IZA3 346 aaPredicted RBP11.08□□□□□ -0.64
CCNL1-216ENST00000475298 IL22RA2Q969J5 263 aa11.08□□□□□ -0.64
CCNL1-216ENST00000475298 PLEKHF2Q9H8W4 249 aa11.08□□□□□ -0.64
CCNL1-216ENST00000475298 FAM186AA6NE01 2351 aa11.08□□□□□ -0.64
CCNL1-216ENST00000475298 hCG_38984A0A1B0GV85 526 aa11.08□□□□□ -0.64
CCNL1-216ENST00000475298 CST7O76096 145 aa11.08□□□□□ -0.64
CCNL1-216ENST00000475298 HRASP01112 189 aa11.08□□□□□ -0.64
CCNL1-216ENST00000475298 TYMSP04818 313 aa11.08□□□□□ -0.64
CCNL1-216ENST00000475298 ACP1P24666 158 aa11.08□□□□□ -0.64
CCNL1-216ENST00000475298 GFRA1P56159 465 aa11.08□□□□□ -0.64
CCNL1-216ENST00000475298 RTP5Q14D33 572 aa11.08□□□□□ -0.64
CCNL1-216ENST00000475298 CNN3Q15417 329 aaKnown RBP11.08□□□□□ -0.64
CCNL1-216ENST00000475298 PHLDA2Q53GA4 152 aa11.08□□□□□ -0.64
CCNL1-216ENST00000475298 Q6ZWC4 215 aa11.08□□□□□ -0.64
CCNL1-216ENST00000475298 OR5L1Q8NGL2 311 aa11.08□□□□□ -0.64
CCNL1-216ENST00000475298 PIGCQ92535 297 aa11.08□□□□□ -0.64
CCNL1-216ENST00000475298 SIGLEC12Q96PQ1 595 aa11.08□□□□□ -0.64
CCNL1-216ENST00000475298 IMMP2LQ96T52 175 aa11.08□□□□□ -0.64
CCNL1-216ENST00000475298 LYRM2Q9NU23 88 aaPredicted RBP11.08□□□□□ -0.64
CCNL1-216ENST00000475298 TMEM106BQ9NUM4 274 aa11.08□□□□□ -0.64
CCNL1-216ENST00000475298 NAT8Q9UHE5 227 aa11.08□□□□□ -0.64
CCNL1-216ENST00000475298 PRSS50Q9UI38 385 aa11.08□□□□□ -0.64
CCNL1-216ENST00000475298 DNAJC13O75165 2243 aa11.07□□□□□ -0.64
CCNL1-216ENST00000475298 SHANK1Q9Y566 2161 aa11.07□□□□□ -0.64
CCNL1-216ENST00000475298 A0A096LPE4 126 aa11.07□□□□□ -0.64
CCNL1-216ENST00000475298 A0A1W2PN81 502 aa11.07□□□□□ -0.64
CCNL1-216ENST00000475298 A0A1W2PPZ6 126 aa11.07□□□□□ -0.64
CCNL1-216ENST00000475298 ZNF850A8MQ14 1090 aa11.07□□□□□ -0.64
CCNL1-216ENST00000475298 SERPINA7P05543 415 aa11.07□□□□□ -0.64
CCNL1-216ENST00000475298 CCL2P13500 99 aa11.07□□□□□ -0.64
CCNL1-216ENST00000475298 CHRNA7P36544 502 aa11.07□□□□□ -0.64
CCNL1-216ENST00000475298 FXYD4P59646 89 aa11.07□□□□□ -0.64
CCNL1-216ENST00000475298 MMDQ15546 238 aa11.07□□□□□ -0.64
CCNL1-216ENST00000475298 ZNF726P1Q15940 193 aa11.07□□□□□ -0.64
CCNL1-216ENST00000475298 KRTAP27-1Q3LI81 207 aa11.07□□□□□ -0.64
CCNL1-216ENST00000475298 CYP2G1PQ6ZSU1 146 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms