RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 ODF3L1Q8IXM7 274 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 TCTEX1D1Q8N7M0 179 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 NPBQ8NG41 125 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 OR51A2Q8NGJ7 313 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 OR5D14Q8NGL3 314 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 GATAD1Q8WUU5 269 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 CCDC107Q8WV48 283 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 RFKQ969G6 155 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 FLYWCH2Q96CP2 140 aaKnown RBP3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 CPNE2Q96FN4 548 aaPredicted RBP3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 NSL1Q96IY1 281 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 C4orf36Q96KX1 117 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 CIB1Q99828 191 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 NABP2Q9BQ15 211 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 ZNF251Q9BRH9 671 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 ELOVL1Q9BW60 279 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 MRPL20Q9BYC9 149 aaKnown RBP3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 FAM192AQ9GZU8 254 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 CST11Q9H112 138 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 HIPK2Q9H2X6 1198 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 TUBA4BQ9H853 241 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 GNG12Q9UBI6 72 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 ST3GAL6Q9Y274 331 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 A3GALT2U3KPV4 340 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 A0A1W2PP11 408 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 DAPL1A0PJW8 107 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 G3V2T6 193 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 J3QLW9 94 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 AIPO00170 330 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 SPINT2O43291 252 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 RGS11O94810 467 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 CDRT1O95170 752 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 HBZP02008 142 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 CSTBP04080 98 aaKnown RBP3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 ZNF19P17023 458 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 NAT1P18440 290 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 RCC1P18754 421 aaPredicted RBP3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 RAB3AP20336 220 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 ZP3P21754 424 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 CALB2P22676 271 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 CX3CL1P78423 397 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 ADARB1P78563 741 aaKnown RBP3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 ID3Q02535 119 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 GNMTQ14749 295 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 MPV17LQ2QL34 196 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 ACTBL2Q562R1 376 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 SYT6Q5T7P8 510 aaPredicted RBP3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 RNLSQ5VYX0 342 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 ZNF660Q6AZW8 331 aaPredicted RBP3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 LIN54Q6MZP7 749 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 CD200R1LQ6Q8B3 271 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 IL34Q6ZMJ4 242 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 LINC00322Q6ZN03 302 aaPredicted RBP3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 ZNF833PQ6ZTB9 187 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 GTSCR1Q86UQ5 136 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 WFDC3Q8IUB2 231 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 GAPTQ8N292 157 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 PRR18Q8N4B5 295 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 OR8J1Q8NGP2 316 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 OR52N1Q8NH53 320 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 OR1L1Q8NH94 360 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 NEK7Q8TDX7 302 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 GPER1Q99527 375 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 PDCD1LG2Q9BQ51 273 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 THTPAQ9BU02 230 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 ABHD14AQ9BUJ0 271 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 TMED9Q9BVK6 235 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 GABARAPL3Q9BY60 117 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 GABARAPL1Q9H0R8 117 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 RIBC2Q9H4K1 309 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 RAB9BQ9NP90 201 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 IL36GQ9NZH8 169 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 CNOT2Q9NZN8 540 aaKnown RBP3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 RCC2Q9P258 522 aaKnown RBP3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 ENOPH1Q9UHY7 261 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 DHDHQ9UQ10 334 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 GAB2Q9UQC2 676 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 ERGIC3Q9Y282 383 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 NUBP2Q9Y5Y2 271 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 CEPT1Q9Y6K0 416 aa3.9□□□□□ -1.79
SNRNP40-204ENST00000474025 LRP1BQ9NZR2 4599 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 SAA2-SAA4A0A096LPE2 208 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 SHISA3A0PJX4 238 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 IZUMO1RA6ND01 250 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 TMEM212A6NML5 194 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 H0Y980 276 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 FCN1O00602 326 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 RRHO14718 337 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 SHOXO15266 292 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 MAGEB3O15480 346 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 BRI3O95415 125 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 LY6G6CO95867 125 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 RPSAP08865 295 aaKnown RBP3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 SAA2P0DJI9 122 aaPredicted RBP3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 SERPINA2P20848 420 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 PPP1CCP36873 323 aaKnown RBP3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 OR3A3P47888 321 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 SYNJ2BPP57105 145 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 TPPP2P59282 170 aa3.89□□□□□ -1.79
SNRNP40-204ENST00000474025 TMEM267Q0VDI3 215 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms