RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 SERF2P84101 59 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 PRAMEF20Q5VT98 475 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 ADPRHL1Q8NDY3 354 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 ANAPC16Q96DE5 110 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 HS3ST6Q96QI5 342 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 UCN2Q96RP3 112 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 MIEN1Q9BRT3 115 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 WDR61Q9GZS3 305 aaKnown RBP11.73□□□□□ -0.53
NPHP4-207ENST00000470763 IL36RNQ9UBH0 155 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 IGKV1-6A0A0C4DH72 117 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 DHHO43323 396 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 KCNIP4Q6PIL6 250 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 ASCL4Q6XD76 172 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 Q6ZSR3 168 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 Q6ZWC4 215 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 ZDHHC23Q8IYP9 409 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 DEFB119Q8N690 84 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 ZNF611Q8N823 705 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 GPR35Q9HC97 309 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 H0Y980 276 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 ZNHIT1O43257 154 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 CRYABP02511 175 aaKnown RBP11.73□□□□□ -0.53
NPHP4-207ENST00000470763 TYMSP04818 313 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 IL6RP08887 468 aaPredicted RBP11.73□□□□□ -0.53
NPHP4-207ENST00000470763 F2RP25116 425 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 CD82P27701 267 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 RPL15P61313 204 aaKnown RBP11.73□□□□□ -0.53
NPHP4-207ENST00000470763 RPP30P78346 268 aaKnown RBP11.73□□□□□ -0.53
NPHP4-207ENST00000470763 PMP22Q01453 160 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 ACSM6Q6P461 480 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 CMTM2Q8TAZ6 248 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 VN1R17PQ8TDU5 208 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 KLHDC7BQ96G42 594 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 PATZ1Q9HBE1 687 aaKnown RBP11.73□□□□□ -0.53
NPHP4-207ENST00000470763 DNAJC4Q9NNZ3 241 aa11.73□□□□□ -0.53
NPHP4-207ENST00000470763 PGPEP1LA6NFU8 196 aa11.72□□□□□ -0.53
NPHP4-207ENST00000470763 PAGE4O60829 102 aa11.72□□□□□ -0.53
NPHP4-207ENST00000470763 SPINK2P20155 84 aa11.72□□□□□ -0.53
NPHP4-207ENST00000470763 PTGDSP41222 190 aa11.72□□□□□ -0.53
NPHP4-207ENST00000470763 BLKP51451 505 aa11.72□□□□□ -0.53
NPHP4-207ENST00000470763 ZNF468Q5VIY5 522 aaPredicted RBP11.72□□□□□ -0.53
NPHP4-207ENST00000470763 C11orf42Q8N5U0 333 aa11.72□□□□□ -0.53
NPHP4-207ENST00000470763 TAF15Q92804 592 aaKnown RBP eCLIP11.72□□□□□ -0.53
NPHP4-207ENST00000470763 TMEM106BQ9NUM4 274 aa11.72□□□□□ -0.53
NPHP4-207ENST00000470763 TMEM250H0YL14 139 aa11.72□□□□□ -0.53
NPHP4-207ENST00000470763 ADMP35318 185 aa11.72□□□□□ -0.53
NPHP4-207ENST00000470763 SRP14P37108 136 aaKnown RBP11.72□□□□□ -0.53
NPHP4-207ENST00000470763 HBG1P69891 147 aa11.72□□□□□ -0.53
NPHP4-207ENST00000470763 HBG2P69892 147 aa11.72□□□□□ -0.53
NPHP4-207ENST00000470763 ULBP2Q9BZM5 246 aa11.72□□□□□ -0.53
NPHP4-207ENST00000470763 ASCL3Q9NQ33 180 aa11.72□□□□□ -0.53
NPHP4-207ENST00000470763 PPP1CBP62140 327 aa11.71□□□□□ -0.53
NPHP4-207ENST00000470763 TPTE2P1Q5T6R2 138 aa11.71□□□□□ -0.53
NPHP4-207ENST00000470763 PINX1Q96BK5 328 aaKnown RBP11.71□□□□□ -0.53
NPHP4-207ENST00000470763 TNFSF13O75888 250 aa11.71□□□□□ -0.53
NPHP4-207ENST00000470763 CRYAAP02489 173 aa11.71□□□□□ -0.53
NPHP4-207ENST00000470763 ZNF16P17020 682 aaPredicted RBP11.71□□□□□ -0.53
NPHP4-207ENST00000470763 DRD1P21728 446 aa11.71□□□□□ -0.53
NPHP4-207ENST00000470763 RPS16P62249 146 aaKnown RBP11.71□□□□□ -0.53
NPHP4-207ENST00000470763 LILRA5A6NI73 299 aa11.71□□□□□ -0.54
NPHP4-207ENST00000470763 CD300LBA8K4G0 201 aa11.71□□□□□ -0.54
NPHP4-207ENST00000470763 NPIPA2E9PIF3 369 aa11.71□□□□□ -0.54
NPHP4-207ENST00000470763 NPIPA3F8WFD2 350 aa11.71□□□□□ -0.54
NPHP4-207ENST00000470763 CRYGSP22914 178 aa11.71□□□□□ -0.54
NPHP4-207ENST00000470763 OR1D5P58170 312 aa11.71□□□□□ -0.54
NPHP4-207ENST00000470763 SLC25A53Q5H9E4 307 aa11.71□□□□□ -0.54
NPHP4-207ENST00000470763 C10orf128Q5T292 105 aa11.71□□□□□ -0.54
NPHP4-207ENST00000470763 OR2M3Q8NG83 312 aa11.71□□□□□ -0.54
NPHP4-207ENST00000470763 IMMP2LQ96T52 175 aa11.71□□□□□ -0.54
NPHP4-207ENST00000470763 MSL2Q9HCI7 577 aa11.71□□□□□ -0.54
NPHP4-207ENST00000470763 FOXJ2Q9P0K8 574 aa11.71□□□□□ -0.54
NPHP4-207ENST00000470763 PXMP4Q9Y6I8 212 aa11.71□□□□□ -0.54
NPHP4-207ENST00000470763 GVINP1Q7Z2Y8 2422 aa11.71□□□□□ -0.54
NPHP4-207ENST00000470763 A0A1B0GX78 115 aa11.7□□□□□ -0.54
NPHP4-207ENST00000470763 C3orf80F5H4A9 247 aa11.7□□□□□ -0.54
NPHP4-207ENST00000470763 IGKV1-39P01597 117 aa11.7□□□□□ -0.54
NPHP4-207ENST00000470763 IGKV1D-39P04432 117 aa11.7□□□□□ -0.54
NPHP4-207ENST00000470763 UMODP07911 640 aa11.7□□□□□ -0.54
NPHP4-207ENST00000470763 BCL3P20749 454 aa11.7□□□□□ -0.54
NPHP4-207ENST00000470763 NPPCP23582 126 aa11.7□□□□□ -0.54
NPHP4-207ENST00000470763 MSX1P28360 303 aa11.7□□□□□ -0.54
NPHP4-207ENST00000470763 RAB7AP51149 207 aa11.7□□□□□ -0.54
NPHP4-207ENST00000470763 SLC38A11Q08AI6 406 aa11.7□□□□□ -0.54
NPHP4-207ENST00000470763 RLN3Q8WXF3 142 aa11.7□□□□□ -0.54
NPHP4-207ENST00000470763 WDYHV1Q96HA8 205 aa11.7□□□□□ -0.54
NPHP4-207ENST00000470763 C20orf144Q9BQM9 153 aa11.7□□□□□ -0.54
NPHP4-207ENST00000470763 HSPB9Q9BQS6 159 aa11.7□□□□□ -0.54
NPHP4-207ENST00000470763 DERL1Q9BUN8 251 aa11.7□□□□□ -0.54
NPHP4-207ENST00000470763 VAMP8Q9BV40 100 aa11.7□□□□□ -0.54
NPHP4-207ENST00000470763 REPIN1Q9BWE0 567 aaKnown RBP11.7□□□□□ -0.54
NPHP4-207ENST00000470763 EP300Q09472 2414 aaPredicted RBP11.7□□□□□ -0.54
NPHP4-207ENST00000470763 TUSC2O75896 110 aa11.7□□□□□ -0.54
NPHP4-207ENST00000470763 C1QTNF9P0C862 333 aa11.7□□□□□ -0.54
NPHP4-207ENST00000470763 MPLP40238 635 aa11.7□□□□□ -0.54
NPHP4-207ENST00000470763 FUT6P51993 359 aa11.7□□□□□ -0.54
NPHP4-207ENST00000470763 PTPRZ1P23471 2315 aaPredicted RBP11.7□□□□□ -0.54
NPHP4-207ENST00000470763 YPEL1O60688 119 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 TMEM183BQ1AE95 376 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 TEX43Q6ZNM6 134 aa11.69□□□□□ -0.54
NPHP4-207ENST00000470763 CLDN23Q96B33 292 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms