RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 OR2S2Q9NQN1 319 aa12.61□□□□□ -0.39
COL18A1-205ENST00000423214 JPT1Q9UK76 154 aa12.61□□□□□ -0.39
COL18A1-205ENST00000423214 ZNF256Q9Y2P7 627 aaPredicted RBP12.61□□□□□ -0.39
COL18A1-205ENST00000423214 LSM4Q9Y4Z0 139 aaKnown RBP12.61□□□□□ -0.39
COL18A1-205ENST00000423214 ATP6V0E1O15342 81 aa12.6□□□□□ -0.39
COL18A1-205ENST00000423214 FUT3P21217 361 aa12.6□□□□□ -0.39
COL18A1-205ENST00000423214 PPP1CCP36873 323 aaKnown RBP12.6□□□□□ -0.39
COL18A1-205ENST00000423214 VHLP40337 213 aa12.6□□□□□ -0.39
COL18A1-205ENST00000423214 ACTBP60709 375 aa12.6□□□□□ -0.39
COL18A1-205ENST00000423214 SPHARQ15513 63 aa12.6□□□□□ -0.39
COL18A1-205ENST00000423214 ACSM3Q53FZ2 586 aa12.6□□□□□ -0.39
COL18A1-205ENST00000423214 FAM27D1Q5T7N8 215 aa12.6□□□□□ -0.39
COL18A1-205ENST00000423214 STEAP3Q658P3 488 aa12.6□□□□□ -0.39
COL18A1-205ENST00000423214 GAPTQ8N292 157 aa12.6□□□□□ -0.39
COL18A1-205ENST00000423214 NKAIN3Q8N8D7 197 aa12.6□□□□□ -0.39
COL18A1-205ENST00000423214 Q96M66 194 aa12.6□□□□□ -0.39
COL18A1-205ENST00000423214 MRPL20Q9BYC9 149 aaKnown RBP12.6□□□□□ -0.39
COL18A1-205ENST00000423214 KIAA1456Q9P272 454 aa12.6□□□□□ -0.39
COL18A1-205ENST00000423214 WSB1Q9Y6I7 421 aa12.6□□□□□ -0.39
COL18A1-205ENST00000423214 NBR2O15453 112 aa12.59□□□□□ -0.39
COL18A1-205ENST00000423214 PDCD6O75340 191 aa12.59□□□□□ -0.39
COL18A1-205ENST00000423214 SC5DO75845 299 aa12.59□□□□□ -0.39
COL18A1-205ENST00000423214 RGS11O94810 467 aa12.59□□□□□ -0.39
COL18A1-205ENST00000423214 GLAP06280 429 aa12.59□□□□□ -0.39
COL18A1-205ENST00000423214 INSL3P51460 131 aa12.59□□□□□ -0.39
COL18A1-205ENST00000423214 ZNF616Q08AN1 781 aa12.59□□□□□ -0.39
COL18A1-205ENST00000423214 MORN2Q502X0 79 aa12.59□□□□□ -0.39
COL18A1-205ENST00000423214 RNLSQ5VYX0 342 aa12.59□□□□□ -0.39
COL18A1-205ENST00000423214 ZNF554Q86TJ5 538 aa12.59□□□□□ -0.39
COL18A1-205ENST00000423214 CDH26Q8IXH8 852 aa12.59□□□□□ -0.39
COL18A1-205ENST00000423214 THRSPQ92748 146 aa12.59□□□□□ -0.39
COL18A1-205ENST00000423214 CYYR1Q96J86 154 aa12.59□□□□□ -0.39
COL18A1-205ENST00000423214 UBE2E2Q96LR5 201 aa12.59□□□□□ -0.39
COL18A1-205ENST00000423214 OR5B12Q96R08 314 aa12.59□□□□□ -0.39
COL18A1-205ENST00000423214 ASCL2Q99929 193 aa12.59□□□□□ -0.39
COL18A1-205ENST00000423214 VSIG4Q9Y279 399 aa12.59□□□□□ -0.39
COL18A1-205ENST00000423214 LSM2Q9Y333 95 aaKnown RBP12.59□□□□□ -0.39
COL18A1-205ENST00000423214 TPRKBQ9Y3C4 175 aa12.59□□□□□ -0.39
COL18A1-205ENST00000423214 TRAV41A0A0B4J266 112 aa12.58□□□□□ -0.4
COL18A1-205ENST00000423214 HLA-DRB1P01911 266 aa12.58□□□□□ -0.4
COL18A1-205ENST00000423214 MAPK3P27361 379 aaPredicted RBP12.58□□□□□ -0.4
COL18A1-205ENST00000423214 IRF3Q14653 427 aa12.58□□□□□ -0.4
COL18A1-205ENST00000423214 NKAPLQ5M9Q1 402 aa12.58□□□□□ -0.4
COL18A1-205ENST00000423214 LYPD6Q86Y78 171 aa12.58□□□□□ -0.4
COL18A1-205ENST00000423214 OR52L2PQ8NGH6 319 aa12.58□□□□□ -0.4
COL18A1-205ENST00000423214 OR1N2Q8NGR9 330 aa12.58□□□□□ -0.4
COL18A1-205ENST00000423214 MYOZ3Q8TDC0 251 aa12.58□□□□□ -0.4
COL18A1-205ENST00000423214 FAM46BQ96A09 425 aa12.58□□□□□ -0.4
COL18A1-205ENST00000423214 CCDC90BQ9GZT6 254 aa12.58□□□□□ -0.4
COL18A1-205ENST00000423214 CST11Q9H112 138 aa12.58□□□□□ -0.4
COL18A1-205ENST00000423214 OR51J1Q9H342 316 aa12.58□□□□□ -0.4
COL18A1-205ENST00000423214 GNB4Q9HAV0 340 aa12.58□□□□□ -0.4
COL18A1-205ENST00000423214 ISYNA1Q9NPH2 558 aa12.58□□□□□ -0.4
COL18A1-205ENST00000423214 MBNL3Q9NUK0 354 aaKnown RBP12.58□□□□□ -0.4
COL18A1-205ENST00000423214 SCOCQ9UIL1 159 aa12.58□□□□□ -0.4
COL18A1-205ENST00000423214 G3V318 75 aa12.57□□□□□ -0.4
COL18A1-205ENST00000423214 I3L521 148 aa12.57□□□□□ -0.4
COL18A1-205ENST00000423214 HSMCR30P0CW71 290 aa12.57□□□□□ -0.4
COL18A1-205ENST00000423214 CNTFRP26992 372 aa12.57□□□□□ -0.4
COL18A1-205ENST00000423214 PPIFP30405 207 aaKnown RBP12.57□□□□□ -0.4
COL18A1-205ENST00000423214 HTD2P86397 168 aa12.57□□□□□ -0.4
COL18A1-205ENST00000423214 ECSCRQ19T08 205 aa12.57□□□□□ -0.4
COL18A1-205ENST00000423214 C5orf64Q2M2E5 130 aa12.57□□□□□ -0.4
COL18A1-205ENST00000423214 LIPKQ5VXJ0 399 aa12.57□□□□□ -0.4
COL18A1-205ENST00000423214 IZUMO2Q6UXV1 221 aa12.57□□□□□ -0.4
COL18A1-205ENST00000423214 CEACAM19Q7Z692 300 aa12.57□□□□□ -0.4
COL18A1-205ENST00000423214 MS4A15Q8N5U1 240 aa12.57□□□□□ -0.4
COL18A1-205ENST00000423214 ZNF491Q8N8L2 437 aa12.57□□□□□ -0.4
COL18A1-205ENST00000423214 OR2AK2Q8NG84 335 aa12.57□□□□□ -0.4
COL18A1-205ENST00000423214 MRPL30Q8TCC3 161 aaKnown RBP12.57□□□□□ -0.4
COL18A1-205ENST00000423214 TMEM203Q969S6 136 aa12.57□□□□□ -0.4
COL18A1-205ENST00000423214 GALMQ96C23 342 aa12.57□□□□□ -0.4
COL18A1-205ENST00000423214 NABP2Q9BQ15 211 aa12.57□□□□□ -0.4
COL18A1-205ENST00000423214 UQCC2Q9BRT2 126 aa12.57□□□□□ -0.4
COL18A1-205ENST00000423214 ANKRD60Q9BZ19 345 aa12.57□□□□□ -0.4
COL18A1-205ENST00000423214 DUSP21Q9H596 190 aa12.57□□□□□ -0.4
COL18A1-205ENST00000423214 ABRACLQ9P1F3 81 aa12.57□□□□□ -0.4
COL18A1-205ENST00000423214 SMAD5-AS1Q9Y6J3 95 aa12.57□□□□□ -0.4
COL18A1-205ENST00000423214 SAA2-SAA4A0A096LPE2 208 aa12.56□□□□□ -0.4
COL18A1-205ENST00000423214 IGHV7-81A0A0B4J1V7 117 aa12.56□□□□□ -0.4
COL18A1-205ENST00000423214 RGS10O43665 173 aa12.56□□□□□ -0.4
COL18A1-205ENST00000423214 YPEL1O60688 119 aa12.56□□□□□ -0.4
COL18A1-205ENST00000423214 SAA2P0DJI9 122 aaPredicted RBP12.56□□□□□ -0.4
COL18A1-205ENST00000423214 CHATP28329 748 aa12.56□□□□□ -0.4
COL18A1-205ENST00000423214 BLVRBP30043 206 aaPredicted RBP12.56□□□□□ -0.4
COL18A1-205ENST00000423214 GNB1P62873 340 aa12.56□□□□□ -0.4
COL18A1-205ENST00000423214 RUNX1Q01196 453 aa12.56□□□□□ -0.4
COL18A1-205ENST00000423214 PLGLAQ15195 96 aa12.56□□□□□ -0.4
COL18A1-205ENST00000423214 RBM48Q5RL73 367 aaKnown RBP12.56□□□□□ -0.4
COL18A1-205ENST00000423214 SIGIRRQ6IA17 410 aa12.56□□□□□ -0.4
COL18A1-205ENST00000423214 ZNF833PQ6ZTB9 187 aa12.56□□□□□ -0.4
COL18A1-205ENST00000423214 LRRTM1Q86UE6 522 aa12.56□□□□□ -0.4
COL18A1-205ENST00000423214 ODF3L1Q8IXM7 274 aa12.56□□□□□ -0.4
COL18A1-205ENST00000423214 CNBD2Q96M20 576 aa12.56□□□□□ -0.4
COL18A1-205ENST00000423214 NEDD4LQ96PU5 975 aa12.56□□□□□ -0.4
COL18A1-205ENST00000423214 YPEL2Q96QA6 119 aa12.56□□□□□ -0.4
COL18A1-205ENST00000423214 KLK15Q9H2R5 256 aa12.56□□□□□ -0.4
COL18A1-205ENST00000423214 VCX3BQ9H321 246 aa12.56□□□□□ -0.4
COL18A1-205ENST00000423214 GHRLQ9UBU3 117 aa12.56□□□□□ -0.4
COL18A1-205ENST00000423214 STEAP1Q9UHE8 339 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms