RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 ZNF442Q9H7R0 627 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 RCC2Q9P258 522 aaKnown RBP4.29□□□□□ -1.72
VCAM1-202ENST00000347652 DUX4Q9UBX2 424 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 PLCE1Q9P212 2302 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 HEATR1Q9H583 2144 aaKnown RBP4.29□□□□□ -1.72
VCAM1-202ENST00000347652 ZANQ9Y493 2812 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 TRBV5-7A0A0A0MS05 114 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 DHRS7CA6NNS2 312 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 ZNF732B4DXR9 585 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 H3BSH0 61 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 J3QLI3 93 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 GABRPO00591 440 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 RRHO14718 337 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 DHRS3O75911 302 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 HLA-DPB1P04440 258 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 SELEP16581 610 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 GADD45AP24522 165 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 MPV17P39210 176 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 MAP2K3P46734 347 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 CRYBA4P53673 196 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 RAB4BP61018 213 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 SUMO2P61956 95 aaKnown RBP4.29□□□□□ -1.72
VCAM1-202ENST00000347652 TRIM16LQ309B1 348 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 Q499Y3 187 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 LINC00336Q6ZUF6 198 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 LRP11Q86VZ4 500 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 PUSL1Q8N0Z8 303 aaKnown RBP4.29□□□□□ -1.72
VCAM1-202ENST00000347652 Q8N402 240 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 OR10V1Q8NGI7 309 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 EDARADDQ8WWZ3 215 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 C22orf15Q8WYQ4 148 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 UPRTQ96BW1 309 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 FGGYQ96C11 551 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 C6orf62Q9GZU0 229 aaPredicted RBP4.29□□□□□ -1.72
VCAM1-202ENST00000347652 HRASLSQ9HDD0 168 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 CA10Q9NS85 328 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 KIF25Q9UIL4 384 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 STUB1Q9UNE7 303 aa4.29□□□□□ -1.72
VCAM1-202ENST00000347652 IGLV3-9A0A075B6K5 115 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 CD300LBA8K4G0 201 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 IQCF6A8MYZ5 107 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 PIN1P1O15428 100 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 TRIAP1O43715 76 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 SCGNO76038 276 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 IGHV3-13P01766 116 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 MELTFP08582 738 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 OR4A8P0C604 315 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 OCM2P0CE71 109 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 ARSBP15848 533 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 FGF9P31371 208 aaPredicted RBP4.28□□□□□ -1.72
VCAM1-202ENST00000347652 FABP6P51161 128 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 RANP62826 216 aaKnown RBP4.28□□□□□ -1.72
VCAM1-202ENST00000347652 FLI1Q01543 452 aaPredicted RBP4.28□□□□□ -1.72
VCAM1-202ENST00000347652 RIPPLY1Q0D2K3 151 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 GUK1Q16774 197 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 OR2T2Q6IF00 324 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 GDPGP1Q6ZNW5 385 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 SLC16A12Q6ZSM3 486 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 CEACAM19Q7Z692 300 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 COMMD2Q86X83 199 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 NECAP1Q8NC96 275 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 SYNPRQ8TBG9 265 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 MRPL24Q96A35 216 aaKnown RBP4.28□□□□□ -1.72
VCAM1-202ENST00000347652 DERL3Q96Q80 235 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 OR14A2Q96R54 314 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 DHRS9Q9BPW9 319 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 SLITRK2Q9H156 845 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 PPA2Q9H2U2 334 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 PLEKHF2Q9H8W4 249 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 ZC4H2Q9NQZ6 224 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 TXNL4BQ9NX01 149 aaKnown RBP4.28□□□□□ -1.72
VCAM1-202ENST00000347652 PURGQ9UJV8 347 aaKnown RBP4.28□□□□□ -1.72
VCAM1-202ENST00000347652 POU2F3Q9UKI9 436 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 FZR1Q9UM11 496 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 USF3Q68DE3 2245 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 ITPR3Q14573 2671 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 PRRC2AP48634 2157 aaKnown RBP4.28□□□□□ -1.72
VCAM1-202ENST00000347652 GGT3PA6NGU5 568 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 A6NIN4 97 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 GABARAPO95166 117 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 RAF1P04049 648 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 UCHL1P09936 223 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 IRF2P14316 349 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 IGFBP3P17936 291 aaPredicted RBP4.28□□□□□ -1.72
VCAM1-202ENST00000347652 SSTR2P30874 369 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 MNDAP41218 407 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 GLP1RP43220 463 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 SOX2P48431 317 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 EVX1P49640 407 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 RBX1P62877 108 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 TIMM50Q3ZCQ8 353 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 TMEM42Q69YG0 159 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 PAMR1Q6UXH9 720 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 CCDC71LQ8N9Z2 235 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 OR4F17Q8NGA8 305 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 OR52N4Q8NGI2 321 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 OR4F5Q8NH21 305 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 TMEM106AQ96A25 262 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 PTH2Q96A98 100 aa4.28□□□□□ -1.72
VCAM1-202ENST00000347652 FLYWCH2Q96CP2 140 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms