RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 NAA60Q9H7X0 242 aa16.96■□□□□ 0.31
RIPPLY3-201ENST00000329553 PLA2G2EQ9NZK7 142 aa16.96■□□□□ 0.31
RIPPLY3-201ENST00000329553 OR1A1Q9P1Q5 309 aa16.96■□□□□ 0.31
RIPPLY3-201ENST00000329553 ERRFI1Q9UJM3 462 aaPredicted RBP16.96■□□□□ 0.31
RIPPLY3-201ENST00000329553 PKD1L2Q7Z442 2459 aa16.96■□□□□ 0.31
RIPPLY3-201ENST00000329553 C17orf100A8MU93 164 aa16.96■□□□□ 0.3
RIPPLY3-201ENST00000329553 JTBO76095 146 aa16.96■□□□□ 0.3
RIPPLY3-201ENST00000329553 SNAPINO95295 136 aa16.96■□□□□ 0.3
RIPPLY3-201ENST00000329553 MUC1P15941 1255 aaPredicted RBP16.96■□□□□ 0.3
RIPPLY3-201ENST00000329553 TMEM187Q14656 261 aa16.96■□□□□ 0.3
RIPPLY3-201ENST00000329553 HMGN3Q15651 99 aa16.96■□□□□ 0.3
RIPPLY3-201ENST00000329553 H1FOOQ8IZA3 346 aaPredicted RBP16.96■□□□□ 0.3
RIPPLY3-201ENST00000329553 RNF7Q9UBF6 113 aa16.96■□□□□ 0.3
RIPPLY3-201ENST00000329553 FBXL17Q9UF56 701 aa16.96■□□□□ 0.3
RIPPLY3-201ENST00000329553 KCNIP3Q9Y2W7 256 aa16.96■□□□□ 0.3
RIPPLY3-201ENST00000329553 VSTM5A8MXK1 200 aa16.95■□□□□ 0.3
RIPPLY3-201ENST00000329553 MED6O75586 246 aa16.95■□□□□ 0.3
RIPPLY3-201ENST00000329553 CCL8P80075 99 aa16.95■□□□□ 0.3
RIPPLY3-201ENST00000329553 BTNL8Q6UX41 500 aa16.95■□□□□ 0.3
RIPPLY3-201ENST00000329553 TGIF2LYQ8IUE0 185 aa16.95■□□□□ 0.3
RIPPLY3-201ENST00000329553 SPAG16Q8N0X2 631 aa16.95■□□□□ 0.3
RIPPLY3-201ENST00000329553 FAM96BQ9Y3D0 163 aa16.95■□□□□ 0.3
RIPPLY3-201ENST00000329553 ZNF737O75373 536 aa16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 ADH4P08319 380 aa16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 OR5AC1P0C628 307 aa16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 GABRA2P47869 451 aa16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 TMEM33P57088 247 aa16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 TPRX1Q8N7U7 411 aa16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 LRTM2Q8N967 370 aa16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 ZNF565Q8N9K5 539 aa16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 PLEKHA2Q9HB19 425 aa16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 KCNJ16Q9NPI9 418 aa16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 PARP11Q9NR21 331 aa16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 PRELID3BQ9Y3B1 194 aa16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 OR2W1Q9Y3N9 320 aa16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 F12P00748 615 aaPredicted RBP16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 CD3EP07766 207 aa16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 GLIPR1P48060 266 aa16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 KRBOX4Q5JUW0 171 aa16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 ZNF818PQ6ZRF7 136 aa16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 CBLN2Q8IUK8 224 aa16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 SEBOXQ9HB31 216 aaPredicted RBP16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 CCL28Q9NRJ3 127 aa16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 KALRNO60229 2985 aa16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 SMG1Q96Q15 3661 aaKnown RBP16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 DYSFO75923 2080 aa16.94■□□□□ 0.3
RIPPLY3-201ENST00000329553 NPIPB11E5RHQ5 1161 aa16.93■□□□□ 0.3
RIPPLY3-201ENST00000329553 H7C2Y5 167 aa16.93■□□□□ 0.3
RIPPLY3-201ENST00000329553 CYB5R3P00387 301 aaPredicted RBP16.93■□□□□ 0.3
RIPPLY3-201ENST00000329553 PLAUP00749 431 aa16.93■□□□□ 0.3
RIPPLY3-201ENST00000329553 CD5P06127 495 aa16.93■□□□□ 0.3
RIPPLY3-201ENST00000329553 CD80P33681 288 aa16.93■□□□□ 0.3
RIPPLY3-201ENST00000329553 NPBWR1P48145 328 aa16.93■□□□□ 0.3
RIPPLY3-201ENST00000329553 TLE1Q04724 770 aa16.93■□□□□ 0.3
RIPPLY3-201ENST00000329553 Q8TCH9 128 aa16.93■□□□□ 0.3
RIPPLY3-201ENST00000329553 ERGIC1Q969X5 290 aa16.93■□□□□ 0.3
RIPPLY3-201ENST00000329553 DIRC2Q96SL1 478 aa16.93■□□□□ 0.3
RIPPLY3-201ENST00000329553 PPP1R3CQ9UQK1 317 aa16.93■□□□□ 0.3
RIPPLY3-201ENST00000329553 LSM5Q9Y4Y9 91 aaKnown RBP16.93■□□□□ 0.3
RIPPLY3-201ENST00000329553 RNASEK-C17orf49H0YIS7 233 aa16.93■□□□□ 0.3
RIPPLY3-201ENST00000329553 MPPED1O15442 326 aa16.93■□□□□ 0.3
RIPPLY3-201ENST00000329553 MBPP02686 304 aaPredicted RBP16.93■□□□□ 0.3
RIPPLY3-201ENST00000329553 CD55P08174 381 aa16.93■□□□□ 0.3
RIPPLY3-201ENST00000329553 CCDC71LQ8N9Z2 235 aa16.93■□□□□ 0.3
RIPPLY3-201ENST00000329553 UBAC2Q8NBM4 344 aa16.93■□□□□ 0.3
RIPPLY3-201ENST00000329553 LYPD6BQ8NI32 183 aa16.93■□□□□ 0.3
RIPPLY3-201ENST00000329553 SUCNR1Q9BXA5 334 aa16.93■□□□□ 0.3
RIPPLY3-201ENST00000329553 KCNIP1Q9NZI2 227 aa16.93■□□□□ 0.3
RIPPLY3-201ENST00000329553 C12orf77C9JDV5 145 aa16.92■□□□□ 0.3
RIPPLY3-201ENST00000329553 HSD17B6O14756 317 aa16.92■□□□□ 0.3
RIPPLY3-201ENST00000329553 SIAH2O43255 324 aa16.92■□□□□ 0.3
RIPPLY3-201ENST00000329553 HEXAP06865 529 aa16.92■□□□□ 0.3
RIPPLY3-201ENST00000329553 GLYATL2Q8WU03 294 aa16.92■□□□□ 0.3
RIPPLY3-201ENST00000329553 FAM222BQ8WU58 562 aa16.92■□□□□ 0.3
RIPPLY3-201ENST00000329553 C18orf12Q96KH6 178 aa16.92■□□□□ 0.3
RIPPLY3-201ENST00000329553 ARV1Q9H2C2 271 aa16.92■□□□□ 0.3
RIPPLY3-201ENST00000329553 DCAF16Q9NXF7 216 aa16.92■□□□□ 0.3
RIPPLY3-201ENST00000329553 DSCAMO60469 2012 aa16.92■□□□□ 0.3
RIPPLY3-201ENST00000329553 E5RGE8 158 aa16.92■□□□□ 0.3
RIPPLY3-201ENST00000329553 FBXO24O75426 580 aa16.92■□□□□ 0.3
RIPPLY3-201ENST00000329553 F2RL1P55085 397 aa16.92■□□□□ 0.3
RIPPLY3-201ENST00000329553 TESK1Q15569 626 aa16.92■□□□□ 0.3
RIPPLY3-201ENST00000329553 ZNRF1Q8ND25 227 aa16.92■□□□□ 0.3
RIPPLY3-201ENST00000329553 OR1L1Q8NH94 360 aa16.92■□□□□ 0.3
RIPPLY3-201ENST00000329553 MRGPRDQ8TDS7 321 aa16.92■□□□□ 0.3
RIPPLY3-201ENST00000329553 SNX22Q96L94 193 aa16.92■□□□□ 0.3
RIPPLY3-201ENST00000329553 GPHA2Q96T91 129 aa16.92■□□□□ 0.3
RIPPLY3-201ENST00000329553 NSG2Q9Y328 171 aa16.92■□□□□ 0.3
RIPPLY3-201ENST00000329553 POMT1Q9Y6A1 747 aa16.92■□□□□ 0.3
RIPPLY3-201ENST00000329553 OOEPA6NGQ2 149 aa16.91■□□□□ 0.3
RIPPLY3-201ENST00000329553 HSPA12AO43301 675 aa16.91■□□□□ 0.3
RIPPLY3-201ENST00000329553 TNFRSF1AP19438 455 aa16.91■□□□□ 0.3
RIPPLY3-201ENST00000329553 PVALBP20472 110 aaPredicted RBP16.91■□□□□ 0.3
RIPPLY3-201ENST00000329553 LIAT1Q6ZQX7 453 aa16.91■□□□□ 0.3
RIPPLY3-201ENST00000329553 FAM185AQ8N0U4 392 aa16.91■□□□□ 0.3
RIPPLY3-201ENST00000329553 MSI2Q96DH6 328 aaKnown RBP16.91■□□□□ 0.3
RIPPLY3-201ENST00000329553 TP53RKQ96S44 253 aa16.91■□□□□ 0.3
RIPPLY3-201ENST00000329553 PKDREJQ9NTG1 2253 aa16.91■□□□□ 0.3
RIPPLY3-201ENST00000329553 PHF1O43189 567 aaPredicted RBP16.9■□□□□ 0.3
RIPPLY3-201ENST00000329553 SCGB1D2O95969 90 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms