RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 TERB2Q8NHR7 220 aa4.24□□□□□ -1.73
LRIT3-201ENST00000327908 OSR1Q8TAX0 266 aaPredicted RBP4.24□□□□□ -1.73
LRIT3-201ENST00000327908 NUDCD2Q8WVJ2 157 aa4.24□□□□□ -1.73
LRIT3-201ENST00000327908 ABHD1Q96SE0 405 aa4.24□□□□□ -1.73
LRIT3-201ENST00000327908 TMPRSS13Q9BYE2 586 aa4.24□□□□□ -1.73
LRIT3-201ENST00000327908 NARFLQ9H6Q4 476 aa4.24□□□□□ -1.73
LRIT3-201ENST00000327908 MMP26Q9NRE1 261 aa4.24□□□□□ -1.73
LRIT3-201ENST00000327908 FKBP11Q9NYL4 201 aa4.24□□□□□ -1.73
LRIT3-201ENST00000327908 KIAA1456Q9P272 454 aa4.24□□□□□ -1.73
LRIT3-201ENST00000327908 WASHC3Q9Y3C0 194 aa4.24□□□□□ -1.73
LRIT3-201ENST00000327908 HMGB3O15347 200 aaKnown RBP4.23□□□□□ -1.73
LRIT3-201ENST00000327908 FGF16O43320 207 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 KCNAB3O43448 404 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 DHFRP00374 187 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 AMY2AP04746 511 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 NFYBP25208 207 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 CEACAM6P40199 344 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 ARF6P62330 175 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 ZNF273Q14593 569 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 PRAMEF5Q5TYX0 476 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 ZNF833PQ6ZTB9 187 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 SGPP2Q8IWX5 399 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 NRGNQ92686 78 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 ABHD14BQ96IU4 210 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 TBX15Q96SF7 602 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 ALX4Q9H161 411 aaPredicted RBP4.23□□□□□ -1.73
LRIT3-201ENST00000327908 DCAF16Q9NXF7 216 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 RDH8Q9NYR8 311 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 KCNK7Q9Y2U2 307 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 V9GYH0 126 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 WDFY4Q6ZS81 3184 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 A0A0B4J203 849 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 IGHV3-64DA0A0J9YX35 117 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 PHF1O43189 567 aaPredicted RBP4.23□□□□□ -1.73
LRIT3-201ENST00000327908 SCGB2A1O75556 95 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 LY6HO94772 140 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 PPYP01298 95 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 CEBPDP49716 269 aaPredicted RBP4.23□□□□□ -1.73
LRIT3-201ENST00000327908 RAB25P57735 213 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 PNKDQ8N490 385 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 ZNF439Q8NDP4 499 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 BVESQ8NE79 360 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 CLCC1Q96S66 551 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 IL36RNQ9UBH0 155 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 SMIM30A4D0T7 59 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 BUB1B-PAK6H3BSN5 160 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 HSPB6O14558 160 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 SMAD7O15105 426 aaKnown RBP4.23□□□□□ -1.73
LRIT3-201ENST00000327908 SSX5O60225 188 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 IGLV1-47P01700 117 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 KLF9Q13886 244 aaPredicted RBP4.23□□□□□ -1.73
LRIT3-201ENST00000327908 MOGAT2Q3SYC2 334 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 SLC25A42Q86VD7 318 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 MFSD4AQ8N468 514 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 COMMD1Q8N668 190 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 OR1L6Q8NGR2 347 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 OR1L1Q8NH94 360 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 COQ8AQ8NI60 647 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 IL1F10Q8WWZ1 152 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 LHX4Q969G2 390 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 RSRP1Q9BUV0 290 aa4.23□□□□□ -1.73
LRIT3-201ENST00000327908 ITPR1Q14643 2758 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 VPS13AQ96RL7 3174 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 HSD17B6O14756 317 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 IL5P05113 134 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 CRYBA1P05813 215 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 IL7P13232 177 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 FCGR2CP31995 323 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 HABP2Q14520 560 aaPredicted RBP4.22□□□□□ -1.73
LRIT3-201ENST00000327908 FAM120AOSQ5T036 256 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 NPFFR1Q9GZQ6 430 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 FAM240BA0A1B0GVZ2 78 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 TMEM89A2RUT3 159 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 H0Y980 276 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 BET1O15155 118 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 LYRM1O43325 122 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 TCF21O43680 179 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 CRLF1O75462 422 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 ZNF205O95201 554 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 GSTT2P0CG29 244 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 ZFP36P26651 326 aaKnown RBP4.22□□□□□ -1.73
LRIT3-201ENST00000327908 RBMXP38159 391 aaKnown RBP4.22□□□□□ -1.73
LRIT3-201ENST00000327908 RIPPLY3P57055 190 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 LOXL3P58215 753 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 EBI3Q14213 229 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 FOXB2Q5VYV0 432 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 HIST2H2BCQ6DN03 193 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 LHFPL1Q86WI0 220 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 TEX45Q8NA69 505 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 OR56B4Q8NH76 319 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 TRIM63Q969Q1 353 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 ZNF2Q9BSG1 426 aaPredicted RBP4.22□□□□□ -1.73
LRIT3-201ENST00000327908 C11orf54Q9H0W9 315 aaPredicted RBP4.22□□□□□ -1.73
LRIT3-201ENST00000327908 PLEKHA2Q9HB19 425 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 RNF150Q9ULK6 438 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 MOB4Q9Y3A3 225 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 MYO18BQ8IUG5 2567 aa4.22□□□□□ -1.73
LRIT3-201ENST00000327908 SPTBN1Q01082 2364 aaKnown RBP4.22□□□□□ -1.73
LRIT3-201ENST00000327908 PRRC2AP48634 2157 aaKnown RBP4.22□□□□□ -1.73
LRIT3-201ENST00000327908 ICE1Q9Y2F5 2266 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms