RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 OR4C3Q8NH37 302 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 OR1L3Q8NH93 324 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 PRSS21Q9Y6M0 314 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 A8MXK9 166 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 J3KTA2 159 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 RBM11P57052 281 aaKnown RBP3.51□□□□□ -1.85
USH2A-201ENST00000307340 C9orf40Q8IXQ3 194 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 PRSS3P2Q8NHM4 247 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 EXTL1Q92935 676 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 TP53RKQ96S44 253 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 ITGBL1O95965 494 aaPredicted RBP3.51□□□□□ -1.85
USH2A-201ENST00000307340 PHLDA2Q53GA4 152 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 OR10D3Q8NH80 312 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 ST6GAL2Q96JF0 529 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 ZNF729A6NN14 1252 aaPredicted RBP3.51□□□□□ -1.85
USH2A-201ENST00000307340 SLC2A10O95528 541 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 LINC00271P0C7V0 271 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 CIARTQ8N365 385 aaPredicted RBP3.51□□□□□ -1.85
USH2A-201ENST00000307340 TBL2Q9Y4P3 447 aaKnown RBP3.51□□□□□ -1.85
USH2A-201ENST00000307340 ATRXP46100 2492 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 RAI1Q7Z5J4 1906 aaPredicted RBP3.5□□□□□ -1.85
USH2A-201ENST00000307340 NRG2O14511 850 aaPredicted RBP3.5□□□□□ -1.85
USH2A-201ENST00000307340 PTTG1IPP53801 180 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 HOXA4Q00056 320 aaPredicted RBP3.5□□□□□ -1.85
USH2A-201ENST00000307340 TIMM23BQ5SRD1 257 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 RASL10BQ96S79 203 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 H0YL77 283 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 NPY1RP25929 384 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 PITX1P78337 314 aaPredicted RBP3.5□□□□□ -1.85
USH2A-201ENST00000307340 BHLHA9Q7RTU4 235 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 A0A087X0M5 115 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 A0A1B0GX30 115 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 CEACAM1P13688 526 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 B2MP61769 119 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 RAE1P78406 368 aaKnown RBP3.5□□□□□ -1.85
USH2A-201ENST00000307340 DUSP2Q05923 314 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 WDR38Q5JTN6 314 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 CLEC2AQ6UVW9 174 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 NKAIN4Q8IVV8 208 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 ZNF511Q8NB15 262 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 OR10G3Q8NGC4 313 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 MIXL1Q9H2W2 232 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 PRRT4C9JH25 899 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 C1QTNF9P0C862 333 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 TMEM251Q8N6I4 163 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 OR8D4Q8NGM9 314 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 DERL1Q9BUN8 251 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 TNFRSF19Q9NS68 423 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 ADAM20O43506 726 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 DLX6P56179 175 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 CDKN3Q16667 212 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 LAMTOR1Q6IAA8 161 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 OR2M3Q8NG83 312 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 OR10W1Q8NGF6 305 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 GPR61Q9BZJ8 451 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 FGF22Q9HCT0 170 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.5□□□□□ -1.85
USH2A-201ENST00000307340 RPL36A-HNRNPH2H7BZ11 118 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 GYPAP02724 150 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 MARCH3Q86UD3 253 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 ZNF547Q8IVP9 402 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 PTPMT1Q8WUK0 201 aaPredicted RBP3.5□□□□□ -1.85
USH2A-201ENST00000307340 AGMATQ9BSE5 352 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 IL18BPO95998 194 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 SBK3P0C264 359 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 ACAA2P42765 397 aaKnown RBP3.5□□□□□ -1.85
USH2A-201ENST00000307340 PPP2CBP62714 309 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 HIST1H1AQ02539 215 aaPredicted RBP3.5□□□□□ -1.85
USH2A-201ENST00000307340 DTX2Q86UW9 622 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 RPEQ96AT9 228 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 M0R2Z0 102 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 AGAP20933 346 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 KIRREL2Q6UWL6 708 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 NXT2Q9NPJ8 142 aaKnown RBP3.5□□□□□ -1.85
USH2A-201ENST00000307340 FSCN3Q9NQT6 498 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 KCNE5Q9UJ90 142 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 NPIPB11E5RHQ5 1161 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 TNFSF11O14788 317 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 Q6ZT83 130 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 WDR13Q9H1Z4 485 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 MGST1P10620 155 aaKnown RBP3.5□□□□□ -1.85
USH2A-201ENST00000307340 HARBI1Q96MB7 349 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 H3BQ15 152 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 IGHV1OR21-1A0A087WYE8 117 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 TRAV34A0A0B4J273 112 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 NPIPB9F8W1W9 429 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 CA1P00915 261 aaPredicted RBP3.5□□□□□ -1.85
USH2A-201ENST00000307340 VAMP3Q15836 100 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 OR51G1Q8NGK1 321 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 ZPLD1Q8TCW7 415 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 CA5BP1Q8WTZ4 195 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 METTL26Q96S19 204 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 LINC00597Q9H2U6 94 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 LHX9Q9NQ69 397 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 TRBV24-1A0A075B6N3 115 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 POM121BA6NF01 834 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 LEUTXA8MZ59 168 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 NGFP01138 241 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 FAM157CP0CG43 387 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 CCL1P22362 96 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms