RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 CEACAM6P40199 344 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 CEBPDP49716 269 aaPredicted RBP8.12□□□□□ -1.11
PHGDH-215ENST00000641371 CCL8P80075 99 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 CATR1Q13166 79 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 MST1LQ2TV78 715 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 ANKRD55Q3KP44 614 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 PHLDA2Q53GA4 152 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 LRRC10Q5BKY1 277 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 TBC1D26Q86UD7 250 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 ZNF695Q8IW36 515 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 ZNF645Q8N7E2 425 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 INO80EQ8NBZ0 244 aaPredicted RBP8.12□□□□□ -1.11
PHGDH-215ENST00000641371 OR52M1Q8NGK5 317 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 PPP1R1CQ8WVI7 109 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 ARL11Q969Q4 196 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 TMEM56Q96MV1 263 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 YPEL2Q96QA6 119 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 TMEM246Q9BRR3 403 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 TMEM222Q9H0R3 208 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 GAL3ST2Q9H3Q3 398 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 PLEKHF2Q9H8W4 249 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 LINC00574Q9H8X3 128 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 GAB2Q9UQC2 676 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 TMEM56-RWDD3S4R434 201 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 ARFGEF3Q5TH69 2177 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 HIVEP3Q5T1R4 2406 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 CACNA1DQ01668 2161 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 KIAA2026Q5HYC2 2103 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 DSPP15924 2871 aaKnown RBP8.11□□□□□ -1.11
PHGDH-215ENST00000641371 C3orf80F5H4A9 247 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 G3V3Q6 166 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 SIX6O95475 246 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 CYB5R3P00387 301 aaPredicted RBP8.11□□□□□ -1.11
PHGDH-215ENST00000641371 VDAC1P21796 283 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 F2RP25116 425 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 LOXP28300 417 aaPredicted RBP8.11□□□□□ -1.11
PHGDH-215ENST00000641371 GLIPR1P48060 266 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 EDDM3BP56851 147 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 EDDM3AQ14507 147 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 C2orf68Q2NKX9 166 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 DCAF12L2Q5VW00 463 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 THOC7Q6I9Y2 204 aaKnown RBP8.11□□□□□ -1.11
PHGDH-215ENST00000641371 ZNF66Q6ZN08 573 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 ZNF818PQ6ZRF7 136 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 ZNF546Q86UE3 836 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 DTX2Q86UW9 622 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.11□□□□□ -1.11
PHGDH-215ENST00000641371 CD300LFQ8TDQ1 290 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 MRGPRDQ8TDS7 321 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 GLYATL2Q8WU03 294 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 RBPMSQ93062 196 aaKnown RBP8.11□□□□□ -1.11
PHGDH-215ENST00000641371 MSI2Q96DH6 328 aaKnown RBP8.11□□□□□ -1.11
PHGDH-215ENST00000641371 C18orf12Q96KH6 178 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 GAFA1Q96PS6 74 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 HSD17B10Q99714 261 aaKnown RBP8.11□□□□□ -1.11
PHGDH-215ENST00000641371 OR2S2Q9NQN1 319 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 CACFD1Q9UGQ2 172 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 MAB21L2Q9Y586 359 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 LINC00312Q9Y6C7 94 aa8.11□□□□□ -1.11
PHGDH-215ENST00000641371 FASNP49327 2511 aaKnown RBP8.11□□□□□ -1.11
PHGDH-215ENST00000641371 ZFYVE26Q68DK2 2539 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 DSCAMO60469 2012 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 NBASA2RRP1 2371 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 IGHV3OR15-7A0A075B7D8 119 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 FXYD6-FXYD2A0A087WZ82 144 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 TRBV23-1A0A0A0MS06 115 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 KBTBD11-OT1A0A1B0GTJ5 212 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 C13orf42A0A1B0GVH6 325 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 A0A1W2PPH5 198 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 B8ZZF3 427 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 SMLR1H3BR10 107 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 C15orf65H3BRN8 121 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 HSD17B6O14756 317 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 NDUFB3O43676 98 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 ZG16O60844 167 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 PGLYRP1O75594 196 aaPredicted RBP8.1□□□□□ -1.11
PHGDH-215ENST00000641371 MPC2O95563 127 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 IFNA7P01567 189 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 SERPINE2P07093 398 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 HOXB5P09067 269 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 LYL1P12980 280 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 GRNP28799 593 aaKnown RBP8.1□□□□□ -1.11
PHGDH-215ENST00000641371 S100A11P31949 105 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 IAH1Q2TAA2 248 aaPredicted RBP8.1□□□□□ -1.11
PHGDH-215ENST00000641371 LAMTOR1Q6IAA8 161 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 PRSS54Q6PEW0 395 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 ACOT7LQ6ZUV0 252 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 FAM219AQ8IW50 185 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 PRR18Q8N4B5 295 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 OR11H4Q8NGC9 324 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 OR13A1Q8NGR1 328 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 CCL17Q92583 94 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 TIMD4Q96H15 378 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 CYYR1Q96J86 154 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 MFFQ9GZY8 342 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 CCL28Q9NRJ3 127 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 CALYQ9NYX4 217 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 OR1A1Q9P1Q5 309 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 GNG12Q9UBI6 72 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 SLC25A10Q9UBX3 287 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms