RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 CRHBPP24387 322 aa10.57□□□□□ -0.72
SNX1-214ENST00000625244 WNT4P56705 351 aa10.57□□□□□ -0.72
SNX1-214ENST00000625244 EWSR1Q01844 656 aaKnown RBP eCLIP10.57□□□□□ -0.72
SNX1-214ENST00000625244 ZNF816Q0VGE8 651 aaPredicted RBP10.57□□□□□ -0.72
SNX1-214ENST00000625244 LTC4SQ16873 150 aa10.57□□□□□ -0.72
SNX1-214ENST00000625244 OR2G6Q5TZ20 316 aa10.57□□□□□ -0.72
SNX1-214ENST00000625244 LGALS9CQ6DKI2 356 aa10.57□□□□□ -0.72
SNX1-214ENST00000625244 RPL22L1Q6P5R6 122 aaKnown RBP10.57□□□□□ -0.72
SNX1-214ENST00000625244 GTSCR1Q86UQ5 136 aa10.57□□□□□ -0.72
SNX1-214ENST00000625244 FAM58AQ8N1B3 248 aa10.57□□□□□ -0.72
SNX1-214ENST00000625244 PRSS35Q8N3Z0 413 aa10.57□□□□□ -0.72
SNX1-214ENST00000625244 OR10X1Q8NGY0 326 aa10.57□□□□□ -0.72
SNX1-214ENST00000625244 OR14K1Q8NGZ2 314 aa10.57□□□□□ -0.72
SNX1-214ENST00000625244 PLEKHA3Q9HB20 300 aa10.57□□□□□ -0.72
SNX1-214ENST00000625244 FKBP14Q9NWM8 211 aa10.57□□□□□ -0.72
SNX1-214ENST00000625244 BABAM2Q9NXR7 383 aa10.57□□□□□ -0.72
SNX1-214ENST00000625244 FRRS1LQ9P0K9 344 aa10.57□□□□□ -0.72
SNX1-214ENST00000625244 MRPS28Q9Y2Q9 187 aaKnown RBP10.57□□□□□ -0.72
SNX1-214ENST00000625244 GATBO75879 557 aaKnown RBP10.56□□□□□ -0.72
SNX1-214ENST00000625244 MOSP00540 346 aa10.56□□□□□ -0.72
SNX1-214ENST00000625244 GAPDHP04406 335 aaKnown RBP10.56□□□□□ -0.72
SNX1-214ENST00000625244 ISG15P05161 165 aa10.56□□□□□ -0.72
SNX1-214ENST00000625244 SLC2A2P11168 524 aaPredicted RBP10.56□□□□□ -0.72
SNX1-214ENST00000625244 ZNF20P17024 532 aa10.56□□□□□ -0.72
SNX1-214ENST00000625244 PRKACAP17612 351 aa10.56□□□□□ -0.72
SNX1-214ENST00000625244 CCL1P22362 96 aa10.56□□□□□ -0.72
SNX1-214ENST00000625244 C21orf33P30042 268 aaPredicted RBP10.56□□□□□ -0.72
SNX1-214ENST00000625244 UBE2V2Q15819 145 aa10.56□□□□□ -0.72
SNX1-214ENST00000625244 KRBOX4Q5JUW0 171 aa10.56□□□□□ -0.72
SNX1-214ENST00000625244 Q8IYB0 196 aa10.56□□□□□ -0.72
SNX1-214ENST00000625244 TMEM104Q8NE00 496 aa10.56□□□□□ -0.72
SNX1-214ENST00000625244 OR13C3Q8NGS6 347 aa10.56□□□□□ -0.72
SNX1-214ENST00000625244 CASTOR1Q8WTX7 329 aa10.56□□□□□ -0.72
SNX1-214ENST00000625244 TSEN15Q8WW01 171 aaKnown RBP10.56□□□□□ -0.72
SNX1-214ENST00000625244 C10orf35Q96D05 121 aa10.56□□□□□ -0.72
SNX1-214ENST00000625244 YTHDF1Q9BYJ9 559 aaKnown RBP10.56□□□□□ -0.72
SNX1-214ENST00000625244 PPIL3Q9H2H8 161 aaKnown RBP10.56□□□□□ -0.72
SNX1-214ENST00000625244 NEK6Q9HC98 313 aa10.56□□□□□ -0.72
SNX1-214ENST00000625244 OR6C3Q9NZP0 311 aa10.56□□□□□ -0.72
SNX1-214ENST00000625244 CLEC2DQ9UHP7 191 aa10.56□□□□□ -0.72
SNX1-214ENST00000625244 A0A1B0GTI1 187 aa10.55□□□□□ -0.72
SNX1-214ENST00000625244 SHISA3A0PJX4 238 aa10.55□□□□□ -0.72
SNX1-214ENST00000625244 ATP6V0E1O15342 81 aa10.55□□□□□ -0.72
SNX1-214ENST00000625244 RGS11O94810 467 aa10.55□□□□□ -0.72
SNX1-214ENST00000625244 HSPB1P04792 205 aaKnown RBP10.55□□□□□ -0.72
SNX1-214ENST00000625244 NANOS3P60323 173 aaKnown RBP10.55□□□□□ -0.72
SNX1-214ENST00000625244 GABARAPL2P60520 117 aa10.55□□□□□ -0.72
SNX1-214ENST00000625244 CDK5R1Q15078 307 aa10.55□□□□□ -0.72
SNX1-214ENST00000625244 MED22Q15528 200 aa10.55□□□□□ -0.72
SNX1-214ENST00000625244 SPIN3Q5JUX0 258 aa10.55□□□□□ -0.72
SNX1-214ENST00000625244 PRSS48Q7RTY5 328 aa10.55□□□□□ -0.72
SNX1-214ENST00000625244 SVOPQ8N4V2 548 aa10.55□□□□□ -0.72
SNX1-214ENST00000625244 NANOGP1Q8N7R0 232 aa10.55□□□□□ -0.72
SNX1-214ENST00000625244 PP6455Q8WZ26 134 aa10.55□□□□□ -0.72
SNX1-214ENST00000625244 DUSP21Q9H596 190 aa10.55□□□□□ -0.72
SNX1-214ENST00000625244 EXOSC4Q9NPD3 245 aaKnown RBP10.55□□□□□ -0.72
SNX1-214ENST00000625244 CALYQ9NYX4 217 aa10.55□□□□□ -0.72
SNX1-214ENST00000625244 IDI2-AS1Q9NZ38 188 aa10.55□□□□□ -0.72
SNX1-214ENST00000625244 DHDHQ9UQ10 334 aa10.55□□□□□ -0.72
SNX1-214ENST00000625244 GSTK1Q9Y2Q3 226 aa10.55□□□□□ -0.72
SNX1-214ENST00000625244 TRAV41A0A0B4J266 112 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 A0A1B0GVY2 172 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 OR4C45A6NMZ5 311 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 E9PI62 339 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 H0Y980 276 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 SH2D1BO14796 132 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 SOX15O60248 233 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 MRPS14O60783 128 aaKnown RBP10.54□□□□□ -0.72
SNX1-214ENST00000625244 CNIH1O95406 144 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 IGHV3-11P01762 117 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 CD2P06729 351 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 GTF2A1P52655 376 aaPredicted RBP10.54□□□□□ -0.72
SNX1-214ENST00000625244 PRR20EP86478 221 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 PRR20CP86479 221 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 PRR20DP86480 221 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 PRR20BP86481 221 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 PRR20AP86496 221 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 ATXN7L3Q14CW9 347 aaPredicted RBP10.54□□□□□ -0.72
SNX1-214ENST00000625244 SPHARQ15513 63 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 IL34Q6ZMJ4 242 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 RDH10Q8IZV5 341 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 MINDY2Q8NBR6 621 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 OR8H1Q8NGG4 311 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 TMEM106AQ96A25 262 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 FLYWCH2Q96CP2 140 aaKnown RBP10.54□□□□□ -0.72
SNX1-214ENST00000625244 SMIM19Q96E16 107 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 ZCCHC4Q9H5U6 513 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 PARP11Q9NR21 331 aa10.54□□□□□ -0.72
SNX1-214ENST00000625244 KLK5Q9Y337 293 aaPredicted RBP10.54□□□□□ -0.72
SNX1-214ENST00000625244 IZUMO1RA6ND01 250 aa10.53□□□□□ -0.72
SNX1-214ENST00000625244 MT-ND2P03891 347 aa10.53□□□□□ -0.72
SNX1-214ENST00000625244 CSN2P05814 226 aa10.53□□□□□ -0.72
SNX1-214ENST00000625244 CD1BP29016 333 aa10.53□□□□□ -0.72
SNX1-214ENST00000625244 GLP1RP43220 463 aa10.53□□□□□ -0.72
SNX1-214ENST00000625244 FUT6P51993 359 aa10.53□□□□□ -0.72
SNX1-214ENST00000625244 SCN1BQ07699 218 aa10.53□□□□□ -0.72
SNX1-214ENST00000625244 Q6ZSR3 168 aa10.53□□□□□ -0.72
SNX1-214ENST00000625244 OR13A1Q8NGR1 328 aa10.53□□□□□ -0.72
SNX1-214ENST00000625244 RFESDQ8TAC1 157 aa10.53□□□□□ -0.72
SNX1-214ENST00000625244 GPR148Q8TDV2 347 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms