RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 GALMQ96C23 342 aa1.16□□□□□ -2.22
SMCHD1-207ENST00000581711 MRAP2Q96G30 205 aa1.16□□□□□ -2.22
SMCHD1-207ENST00000581711 RAB1BQ9H0U4 201 aa1.16□□□□□ -2.22
SMCHD1-207ENST00000581711 SCML1Q9UN30 329 aa1.16□□□□□ -2.22
SMCHD1-207ENST00000581711 SNX24Q9Y343 169 aa1.16□□□□□ -2.22
SMCHD1-207ENST00000581711 MDC1Q14676 2089 aaKnown RBP1.16□□□□□ -2.22
SMCHD1-207ENST00000581711 FABP7O15540 132 aa1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 ARL14EPLP0DKL9 152 aa1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 PEBP1P30086 187 aaKnown RBP1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 SULT1A2P50226 295 aa1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 OR10A3P58181 314 aa1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 BSXQ3C1V8 233 aa1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 MRPL51Q4U2R6 128 aaKnown RBP1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 OR2Y1Q8NGV0 311 aa1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 OR4X1Q8NH49 305 aa1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 OR10A6Q8NH74 314 aa1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 ANGPTL6Q8NI99 470 aa1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 ZNF563Q8TA94 476 aa1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 DTD1Q8TEA8 209 aa1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 TMBIM1Q969X1 311 aa1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 CIDECQ96AQ7 238 aaPredicted RBP1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 C1QTNF6Q9BXI9 259 aa1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 PECRQ9BY49 303 aa1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 XKR8Q9H6D3 395 aa1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 TXNL4BQ9NX01 149 aaKnown RBP1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 MAT2BQ9NZL9 334 aa1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 RAB3GAP2Q9H2M9 1393 aa1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 RTEL1-TNFRSF6BF6WH68 1400 aa1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 PLCH2O75038 1416 aa1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 ABCB11O95342 1321 aa1.15□□□□□ -2.23
SMCHD1-207ENST00000581711 IGHV3-73A0A0B4J1V6 119 aa1.14□□□□□ -2.23
SMCHD1-207ENST00000581711 IGHV3-30-3P0DP02 117 aa1.14□□□□□ -2.23
SMCHD1-207ENST00000581711 CTSEP14091 401 aa1.14□□□□□ -2.23
SMCHD1-207ENST00000581711 CD200P41217 278 aa1.14□□□□□ -2.23
SMCHD1-207ENST00000581711 KRTAP10-4P60372 401 aaPredicted RBP1.14□□□□□ -2.23
SMCHD1-207ENST00000581711 C1QTNF8P60827 252 aa1.14□□□□□ -2.23
SMCHD1-207ENST00000581711 TNNC1P63316 161 aa1.14□□□□□ -2.23
SMCHD1-207ENST00000581711 PDK2Q15119 407 aa1.14□□□□□ -2.23
SMCHD1-207ENST00000581711 MAPK14Q16539 360 aa1.14□□□□□ -2.23
SMCHD1-207ENST00000581711 OR10J3Q5JRS4 329 aa1.14□□□□□ -2.23
SMCHD1-207ENST00000581711 HENMT1Q5T8I9 393 aaKnown RBP1.14□□□□□ -2.23
SMCHD1-207ENST00000581711 N4BP2L1Q5TBK1 243 aaPredicted RBP1.14□□□□□ -2.23
SMCHD1-207ENST00000581711 ZBTB8OSQ8IWT0 167 aa1.14□□□□□ -2.23
SMCHD1-207ENST00000581711 OR4X2Q8NGF9 303 aa1.14□□□□□ -2.23
SMCHD1-207ENST00000581711 IFT81Q8WYA0 676 aa1.14□□□□□ -2.23
SMCHD1-207ENST00000581711 Q9BRP9 147 aa1.14□□□□□ -2.23
SMCHD1-207ENST00000581711 ZNF426Q9BUY5 554 aa1.14□□□□□ -2.23
SMCHD1-207ENST00000581711 DMAC2Q9NW81 257 aa1.14□□□□□ -2.23
SMCHD1-207ENST00000581711 IGLV3-9A0A075B6K5 115 aa1.13□□□□□ -2.23
SMCHD1-207ENST00000581711 GOLGA8IPA6NC78 632 aa1.13□□□□□ -2.23
SMCHD1-207ENST00000581711 BOLA2-SMG1P6H3BVE0 249 aa1.13□□□□□ -2.23
SMCHD1-207ENST00000581711 ACTR1BP42025 376 aa1.13□□□□□ -2.23
SMCHD1-207ENST00000581711 RASL11AQ6T310 242 aa1.13□□□□□ -2.23
SMCHD1-207ENST00000581711 VN1R4Q7Z5H5 301 aa1.13□□□□□ -2.23
SMCHD1-207ENST00000581711 SELENOHQ8IZQ5 122 aaKnown RBP1.13□□□□□ -2.23
SMCHD1-207ENST00000581711 MGLLQ99685 303 aa1.13□□□□□ -2.23
SMCHD1-207ENST00000581711 MRPL32Q9BYC8 188 aaKnown RBP1.13□□□□□ -2.23
SMCHD1-207ENST00000581711 ENPP5Q9UJA9 477 aa1.13□□□□□ -2.23
SMCHD1-207ENST00000581711 FBXL3Q9UKT7 428 aa1.13□□□□□ -2.23
SMCHD1-207ENST00000581711 SLX4Q8IY92 1834 aa1.12□□□□□ -2.23
SMCHD1-207ENST00000581711 A0A1B0GVG6 124 aa1.12□□□□□ -2.23
SMCHD1-207ENST00000581711 ARRDC5A6NEK1 342 aa1.12□□□□□ -2.23
SMCHD1-207ENST00000581711 GPR171O14626 319 aa1.12□□□□□ -2.23
SMCHD1-207ENST00000581711 FBP1P09467 338 aa1.12□□□□□ -2.23
SMCHD1-207ENST00000581711 ESDP10768 282 aa1.12□□□□□ -2.23
SMCHD1-207ENST00000581711 SLC25A16P16260 332 aa1.12□□□□□ -2.23
SMCHD1-207ENST00000581711 ORM2P19652 201 aa1.12□□□□□ -2.23
SMCHD1-207ENST00000581711 NUP62P37198 522 aaPredicted RBP1.12□□□□□ -2.23
SMCHD1-207ENST00000581711 HINT1P49773 126 aaPredicted RBP1.12□□□□□ -2.23
SMCHD1-207ENST00000581711 AKR1C2P52895 323 aa1.12□□□□□ -2.23
SMCHD1-207ENST00000581711 SLC35A2P78381 396 aa1.12□□□□□ -2.23
SMCHD1-207ENST00000581711 PAFAH1B3Q15102 231 aaKnown RBP1.12□□□□□ -2.23
SMCHD1-207ENST00000581711 CENPWQ5EE01 88 aa1.12□□□□□ -2.23
SMCHD1-207ENST00000581711 DEFB119Q8N690 84 aa1.12□□□□□ -2.23
SMCHD1-207ENST00000581711 LRRC20Q8TCA0 184 aa1.12□□□□□ -2.23
SMCHD1-207ENST00000581711 TMIGD2Q96BF3 282 aa1.12□□□□□ -2.23
SMCHD1-207ENST00000581711 MBOAT7Q96N66 472 aa1.12□□□□□ -2.23
SMCHD1-207ENST00000581711 TIMM21Q9BVV7 248 aa1.12□□□□□ -2.23
SMCHD1-207ENST00000581711 MRM2Q9UI43 246 aaKnown RBP1.12□□□□□ -2.23
SMCHD1-207ENST00000581711 MRPS16Q9Y3D3 137 aaKnown RBP1.12□□□□□ -2.23
SMCHD1-207ENST00000581711 C11orf86A6NJI1 115 aa1.11□□□□□ -2.23
SMCHD1-207ENST00000581711 NDUFS8O00217 210 aa1.11□□□□□ -2.23
SMCHD1-207ENST00000581711 GPX1P07203 203 aa1.11□□□□□ -2.23
SMCHD1-207ENST00000581711 LCN1P31025 176 aa1.11□□□□□ -2.23
SMCHD1-207ENST00000581711 UGT2B10P36537 528 aa1.11□□□□□ -2.23
SMCHD1-207ENST00000581711 TSPEAR-AS2P59090 65 aa1.11□□□□□ -2.23
SMCHD1-207ENST00000581711 ACTBP60709 375 aa1.11□□□□□ -2.23
SMCHD1-207ENST00000581711 ACTG1P63261 375 aa1.11□□□□□ -2.23
SMCHD1-207ENST00000581711 TRMT12Q53H54 448 aaKnown RBP1.11□□□□□ -2.23
SMCHD1-207ENST00000581711 TIMM23BQ5SRD1 257 aa1.11□□□□□ -2.23
SMCHD1-207ENST00000581711 AGTRAPQ6RW13 159 aa1.11□□□□□ -2.23
SMCHD1-207ENST00000581711 TMEM75Q8N9X5 138 aa1.11□□□□□ -2.23
SMCHD1-207ENST00000581711 ACBD4Q8NC06 268 aa1.11□□□□□ -2.23
SMCHD1-207ENST00000581711 SPACA4Q8TDM5 124 aa1.11□□□□□ -2.23
SMCHD1-207ENST00000581711 TBX5Q99593 518 aa1.11□□□□□ -2.23
SMCHD1-207ENST00000581711 GTSF1LQ9H1H1 148 aa1.11□□□□□ -2.23
SMCHD1-207ENST00000581711 GOLPH3Q9H4A6 298 aa1.11□□□□□ -2.23
SMCHD1-207ENST00000581711 MED13Q9UHV7 2174 aa1.11□□□□□ -2.23
SMCHD1-207ENST00000581711 DENND4BO75064 1496 aaPredicted RBP1.11□□□□□ -2.23
SMCHD1-207ENST00000581711 DSCAML1Q8TD84 2053 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms