RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 B4DEV8 164 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 YKT6O15498 198 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 LILRA1O75019 489 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 IGKV1-39P01597 117 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 IGKV1D-39P04432 117 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 HIST1H1BP16401 226 aaKnown RBP14.87□□□□□ -0.03
SCARF1-205ENST00000571272 CA5BP1Q8WTZ4 195 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 RCC1LQ96I51 464 aaKnown RBP14.87□□□□□ -0.03
SCARF1-205ENST00000571272 HIST1H2AAQ96QV6 131 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 PLK3Q9H4B4 646 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 R4GN57 208 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 TRAV24A0A0B4J272 114 aa14.86□□□□□ -0.03
SCARF1-205ENST00000571272 SYNGR2O43760 224 aa14.86□□□□□ -0.03
SCARF1-205ENST00000571272 CFIP05156 583 aa14.86□□□□□ -0.03
SCARF1-205ENST00000571272 ZFP36L1Q07352 338 aaKnown RBP14.86□□□□□ -0.03
SCARF1-205ENST00000571272 BEND4Q6ZU67 534 aa14.86□□□□□ -0.03
SCARF1-205ENST00000571272 OR13D1Q8NGV5 346 aa14.86□□□□□ -0.03
SCARF1-205ENST00000571272 POM121Q96HA1 1249 aa14.86□□□□□ -0.03
SCARF1-205ENST00000571272 CABLES2Q9BTV7 478 aa14.86□□□□□ -0.03
SCARF1-205ENST00000571272 OR14J1Q9UGF5 321 aa14.86□□□□□ -0.03
SCARF1-205ENST00000571272 CYB5R3P00387 301 aaPredicted RBP14.86□□□□□ -0.03
SCARF1-205ENST00000571272 HAPLN4Q86UW8 402 aa14.86□□□□□ -0.03
SCARF1-205ENST00000571272 OR10G4Q8NGN3 311 aa14.86□□□□□ -0.03
SCARF1-205ENST00000571272 HIPK2Q9H2X6 1198 aa14.86□□□□□ -0.03
SCARF1-205ENST00000571272 SDF2L1Q9HCN8 221 aa14.86□□□□□ -0.03
SCARF1-205ENST00000571272 RBM7Q9Y580 266 aaKnown RBP14.86□□□□□ -0.03
SCARF1-205ENST00000571272 CD300LBA8K4G0 201 aa14.85□□□□□ -0.03
SCARF1-205ENST00000571272 PTBP3O95758 552 aaKnown RBP14.85□□□□□ -0.03
SCARF1-205ENST00000571272 SAXO1Q8IYX7 474 aa14.85□□□□□ -0.03
SCARF1-205ENST00000571272 LILRB2Q8N423 598 aa14.85□□□□□ -0.03
SCARF1-205ENST00000571272 ZNF525Q8N782 197 aa14.85□□□□□ -0.03
SCARF1-205ENST00000571272 PRO1933Q9H354 126 aa14.85□□□□□ -0.03
SCARF1-205ENST00000571272 HMGB3O15347 200 aaKnown RBP14.85□□□□□ -0.03
SCARF1-205ENST00000571272 SPANXN5Q5MJ07 72 aa14.85□□□□□ -0.03
SCARF1-205ENST00000571272 TUSC5Q8IXB3 177 aa14.85□□□□□ -0.03
SCARF1-205ENST00000571272 ELOA3CA0A087WX78 387 aaPredicted RBP14.84□□□□□ -0.03
SCARF1-205ENST00000571272 CD55P08174 381 aa14.84□□□□□ -0.03
SCARF1-205ENST00000571272 PNRC1Q12796 327 aaPredicted RBP14.84□□□□□ -0.03
SCARF1-205ENST00000571272 RNPS1Q15287 305 aaKnown RBP14.84□□□□□ -0.03
SCARF1-205ENST00000571272 SPINK14Q6IE38 97 aa14.84□□□□□ -0.03
SCARF1-205ENST00000571272 RBKSQ9H477 322 aa14.84□□□□□ -0.03
SCARF1-205ENST00000571272 DOCK10Q96BY6 2186 aa14.84□□□□□ -0.03
SCARF1-205ENST00000571272 IGKV1-5P01602 117 aa14.84□□□□□ -0.03
SCARF1-205ENST00000571272 MDH2P40926 338 aaKnown RBP14.84□□□□□ -0.03
SCARF1-205ENST00000571272 RND2P52198 227 aa14.84□□□□□ -0.03
SCARF1-205ENST00000571272 CLN3Q13286 438 aa14.84□□□□□ -0.03
SCARF1-205ENST00000571272 OR10V1Q8NGI7 309 aa14.84□□□□□ -0.03
SCARF1-205ENST00000571272 CACNA1DQ01668 2161 aa14.84□□□□□ -0.03
SCARF1-205ENST00000571272 DOCK11Q5JSL3 2073 aa14.83□□□□□ -0.03
SCARF1-205ENST00000571272 RHBDL1O75783 438 aa14.83□□□□□ -0.03
SCARF1-205ENST00000571272 NECAP1Q8NC96 275 aa14.83□□□□□ -0.03
SCARF1-205ENST00000571272 APOBEC3DQ96AK3 386 aaPredicted RBP14.83□□□□□ -0.03
SCARF1-205ENST00000571272 DLL3Q9NYJ7 618 aa14.83□□□□□ -0.03
SCARF1-205ENST00000571272 KCNS2Q9ULS6 477 aa14.83□□□□□ -0.03
SCARF1-205ENST00000571272 MED12LQ86YW9 2145 aa14.83□□□□□ -0.04
SCARF1-205ENST00000571272 WDR1O75083 606 aa14.83□□□□□ -0.04
SCARF1-205ENST00000571272 GFRA1P56159 465 aa14.83□□□□□ -0.04
SCARF1-205ENST00000571272 ADIRFQ15847 76 aa14.83□□□□□ -0.04
SCARF1-205ENST00000571272 WDR25Q64LD2 544 aaPredicted RBP14.83□□□□□ -0.04
SCARF1-205ENST00000571272 TCEAL6Q6IPX3 200 aa14.83□□□□□ -0.04
SCARF1-205ENST00000571272 UNQ6494/PRO21346Q6UXR6 183 aa14.83□□□□□ -0.04
SCARF1-205ENST00000571272 PPP1R32Q7Z5V6 425 aa14.83□□□□□ -0.04
SCARF1-205ENST00000571272 OR5A2Q8NGI9 324 aa14.83□□□□□ -0.04
SCARF1-205ENST00000571272 MBD3L1Q8WWY6 194 aa14.83□□□□□ -0.04
SCARF1-205ENST00000571272 C14orf144Q96I85 54 aa14.83□□□□□ -0.04
SCARF1-205ENST00000571272 PACRGQ96M98 296 aaPredicted RBP14.83□□□□□ -0.04
SCARF1-205ENST00000571272 OR4C12Q96R67 309 aa14.83□□□□□ -0.04
SCARF1-205ENST00000571272 RIMS4Q9H426 269 aaPredicted RBP14.83□□□□□ -0.04
SCARF1-205ENST00000571272 MAP1LC3B2A6NCE7 125 aa14.83□□□□□ -0.04
SCARF1-205ENST00000571272 IGLV2-14P01704 120 aa14.83□□□□□ -0.04
SCARF1-205ENST00000571272 CELA3AP09093 270 aa14.83□□□□□ -0.04
SCARF1-205ENST00000571272 CLEC12BQ2HXU8 276 aa14.83□□□□□ -0.04
SCARF1-205ENST00000571272 FAM58AQ8N1B3 248 aa14.83□□□□□ -0.04
SCARF1-205ENST00000571272 MAP1LC3BQ9GZQ8 125 aa14.83□□□□□ -0.04
SCARF1-205ENST00000571272 OR8G2PQ6IF36 304 aa14.82□□□□□ -0.04
SCARF1-205ENST00000571272 HIST1H2BLQ99880 126 aa14.82□□□□□ -0.04
SCARF1-205ENST00000571272 TMEM242Q9NWH2 141 aa14.82□□□□□ -0.04
SCARF1-205ENST00000571272 VAX2Q9UIW0 290 aa14.82□□□□□ -0.04
SCARF1-205ENST00000571272 UBE2L5PA0A1B0GUS4 154 aa14.82□□□□□ -0.04
SCARF1-205ENST00000571272 TUBG1P23258 451 aa14.82□□□□□ -0.04
SCARF1-205ENST00000571272 CYB561P49447 251 aa14.82□□□□□ -0.04
SCARF1-205ENST00000571272 LRRC75BQ2VPJ9 315 aa14.82□□□□□ -0.04
SCARF1-205ENST00000571272 OR5P3Q8WZ94 311 aa14.82□□□□□ -0.04
SCARF1-205ENST00000571272 IGHV3-64DA0A0J9YX35 117 aa14.81□□□□□ -0.04
SCARF1-205ENST00000571272 PATE3B3GLJ2 98 aa14.81□□□□□ -0.04
SCARF1-205ENST00000571272 PHOX2AO14813 284 aa14.81□□□□□ -0.04
SCARF1-205ENST00000571272 ZNF737O75373 536 aa14.81□□□□□ -0.04
SCARF1-205ENST00000571272 SLC25A6P12236 298 aa14.81□□□□□ -0.04
SCARF1-205ENST00000571272 LHX4Q969G2 390 aa14.81□□□□□ -0.04
SCARF1-205ENST00000571272 SMIM7Q9BQ49 75 aa14.81□□□□□ -0.04
SCARF1-205ENST00000571272 WDFY4Q6ZS81 3184 aa14.81□□□□□ -0.04
SCARF1-205ENST00000571272 DEGS1O15121 323 aa14.81□□□□□ -0.04
SCARF1-205ENST00000571272 HBG1P69891 147 aa14.81□□□□□ -0.04
SCARF1-205ENST00000571272 HBG2P69892 147 aa14.81□□□□□ -0.04
SCARF1-205ENST00000571272 TESK1Q15569 626 aa14.81□□□□□ -0.04
SCARF1-205ENST00000571272 ZNF585BQ52M93 769 aa14.81□□□□□ -0.04
SCARF1-205ENST00000571272 MRGPRGQ86SM5 289 aa14.81□□□□□ -0.04
SCARF1-205ENST00000571272 TMEM45BQ96B21 275 aa14.81□□□□□ -0.04
SCARF1-205ENST00000571272 MEGF10Q96KG7 1140 aa14.81□□□□□ -0.04
SCARF1-205ENST00000571272 GAB2Q9UQC2 676 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms