RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 RCC2Q9P258 522 aaKnown RBP12.07□□□□□ -0.48
NME3-211ENST00000568561 RPL36Q9Y3U8 105 aaKnown RBP12.07□□□□□ -0.48
NME3-211ENST00000568561 TRAV8-7A0A075B6U6 113 aa12.06□□□□□ -0.48
NME3-211ENST00000568561 ATP6V0E1O15342 81 aa12.06□□□□□ -0.48
NME3-211ENST00000568561 Q3ZCU0 254 aa12.06□□□□□ -0.48
NME3-211ENST00000568561 RAB12Q6IQ22 244 aa12.06□□□□□ -0.48
NME3-211ENST00000568561 OVCH2Q7RTZ1 564 aa12.06□□□□□ -0.48
NME3-211ENST00000568561 ZNF491Q8N8L2 437 aa12.06□□□□□ -0.48
NME3-211ENST00000568561 ZFP41Q8N8Y5 198 aa12.06□□□□□ -0.48
NME3-211ENST00000568561 MRPL20Q9BYC9 149 aaKnown RBP12.06□□□□□ -0.48
NME3-211ENST00000568561 ALX4Q9H161 411 aaPredicted RBP12.06□□□□□ -0.48
NME3-211ENST00000568561 BANF2Q9H503 90 aa12.06□□□□□ -0.48
NME3-211ENST00000568561 ISYNA1Q9NPH2 558 aa12.06□□□□□ -0.48
NME3-211ENST00000568561 MRPS18AQ9NVS2 196 aaKnown RBP12.06□□□□□ -0.48
NME3-211ENST00000568561 GAR1Q9NY12 217 aaKnown RBP12.06□□□□□ -0.48
NME3-211ENST00000568561 MRPS28Q9Y2Q9 187 aaKnown RBP12.06□□□□□ -0.48
NME3-211ENST00000568561 SMAD5-AS1Q9Y6J3 95 aa12.06□□□□□ -0.48
NME3-211ENST00000568561 LOC100130705A0A1B0GUX0 176 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 A0A1W2PPK0 400 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 UBE2QL1A1L167 161 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 MCRIP1C9JLW8 97 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 I3L521 148 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 ZNF780AO75290 641 aaPredicted RBP12.05□□□□□ -0.48
NME3-211ENST00000568561 WBP4O75554 376 aaKnown RBP12.05□□□□□ -0.48
NME3-211ENST00000568561 OR8U8P0C7N1 319 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 OR5H8P0DN80 308 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 IGFBP3P17936 291 aaPredicted RBP12.05□□□□□ -0.48
NME3-211ENST00000568561 CHATP28329 748 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 PPIFP30405 207 aaKnown RBP12.05□□□□□ -0.48
NME3-211ENST00000568561 PPP1CCP36873 323 aaKnown RBP12.05□□□□□ -0.48
NME3-211ENST00000568561 ACTBP60709 375 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 ZNF616Q08AN1 781 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 CCDC58Q4VC31 144 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 C6orf183Q5T699 404 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 TMEM65Q6PI78 240 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 GLIPR1L1Q6UWM5 242 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 SBSPONQ8IVN8 264 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 JAGN1Q8N5M9 183 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 OR52L2PQ8NGH6 319 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 MUC7Q8TAX7 377 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 CASTOR1Q8WTX7 329 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 SMIM19Q96E16 107 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 UBE2E2Q96LR5 201 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 RCHY1Q96PM5 261 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 FGF20Q9NP95 211 aaPredicted RBP12.05□□□□□ -0.48
NME3-211ENST00000568561 ZNF580Q9UK33 172 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 VSIG4Q9Y279 399 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 RRP15Q9Y3B9 282 aaKnown RBP12.05□□□□□ -0.48
NME3-211ENST00000568561 PEX16Q9Y5Y5 336 aa12.05□□□□□ -0.48
NME3-211ENST00000568561 TRBV5-5A0A0J9YX44 114 aa12.04□□□□□ -0.48
NME3-211ENST00000568561 LANCL1O43813 399 aa12.04□□□□□ -0.48
NME3-211ENST00000568561 BLVRBP30043 206 aaPredicted RBP12.04□□□□□ -0.48
NME3-211ENST00000568561 OR3A3P47888 321 aa12.04□□□□□ -0.48
NME3-211ENST00000568561 CASC10Q5T4H9 136 aa12.04□□□□□ -0.48
NME3-211ENST00000568561 DCUN1D4Q92564 292 aa12.04□□□□□ -0.48
NME3-211ENST00000568561 GHSRQ92847 366 aa12.04□□□□□ -0.48
NME3-211ENST00000568561 ABHD14AQ9BUJ0 271 aa12.04□□□□□ -0.48
NME3-211ENST00000568561 C9orf16Q9BUW7 83 aa12.04□□□□□ -0.48
NME3-211ENST00000568561 ANKRD60Q9BZ19 345 aa12.04□□□□□ -0.48
NME3-211ENST00000568561 SELENOIQ9C0D9 397 aa12.04□□□□□ -0.48
NME3-211ENST00000568561 OR51J1Q9H342 316 aa12.04□□□□□ -0.48
NME3-211ENST00000568561 TAF9BQ9HBM6 251 aa12.04□□□□□ -0.48
NME3-211ENST00000568561 SPACA1Q9HBV2 294 aa12.04□□□□□ -0.48
NME3-211ENST00000568561 OR2S2Q9NQN1 319 aa12.04□□□□□ -0.48
NME3-211ENST00000568561 CLEC2DQ9UHP7 191 aa12.04□□□□□ -0.48
NME3-211ENST00000568561 STARD9Q9P2P6 4700 aa12.03□□□□□ -0.48
NME3-211ENST00000568561 IGHV7-81A0A0B4J1V7 117 aa12.03□□□□□ -0.48
NME3-211ENST00000568561 TRAV41A0A0B4J266 112 aa12.03□□□□□ -0.48
NME3-211ENST00000568561 OGG1O15527 345 aa12.03□□□□□ -0.48
NME3-211ENST00000568561 SAP30O75446 220 aa12.03□□□□□ -0.48
NME3-211ENST00000568561 IGLV1-40P01703 118 aa12.03□□□□□ -0.48
NME3-211ENST00000568561 SLURP1P55000 103 aa12.03□□□□□ -0.48
NME3-211ENST00000568561 NDPQ00604 133 aa12.03□□□□□ -0.48
NME3-211ENST00000568561 ECSCRQ19T08 205 aa12.03□□□□□ -0.48
NME3-211ENST00000568561 MORN2Q502X0 79 aa12.03□□□□□ -0.48
NME3-211ENST00000568561 AWAT2Q6E213 333 aa12.03□□□□□ -0.48
NME3-211ENST00000568561 TMPRSS11AQ6ZMR5 421 aa12.03□□□□□ -0.48
NME3-211ENST00000568561 ODF3L1Q8IXM7 274 aa12.03□□□□□ -0.48
NME3-211ENST00000568561 GAPTQ8N292 157 aa12.03□□□□□ -0.48
NME3-211ENST00000568561 OR14A2Q96R54 314 aa12.03□□□□□ -0.48
NME3-211ENST00000568561 ZNF251Q9BRH9 671 aa12.03□□□□□ -0.48
NME3-211ENST00000568561 CKLFQ9UBR5 152 aa12.03□□□□□ -0.48
NME3-211ENST00000568561 FBXO7Q9Y3I1 522 aa12.03□□□□□ -0.48
NME3-211ENST00000568561 DNAH1Q9P2D7 4330 aa12.02□□□□□ -0.48
NME3-211ENST00000568561 PNMA8CA0A1B0GUJ8 204 aa12.02□□□□□ -0.49
NME3-211ENST00000568561 OVOL1O14753 267 aa12.02□□□□□ -0.49
NME3-211ENST00000568561 NBR2O15453 112 aa12.02□□□□□ -0.49
NME3-211ENST00000568561 CRTAPO75718 401 aaPredicted RBP12.02□□□□□ -0.49
NME3-211ENST00000568561 HLA-DRB1P01911 266 aa12.02□□□□□ -0.49
NME3-211ENST00000568561 MAS1P04201 325 aa12.02□□□□□ -0.49
NME3-211ENST00000568561 FRMD6-AS1P0C7T7 363 aa12.02□□□□□ -0.49
NME3-211ENST00000568561 SPNP16150 400 aa12.02□□□□□ -0.49
NME3-211ENST00000568561 MGMTP16455 207 aa12.02□□□□□ -0.49
NME3-211ENST00000568561 RAB9AP51151 201 aa12.02□□□□□ -0.49
NME3-211ENST00000568561 RPS11P62280 158 aaKnown RBP eCLIP12.02□□□□□ -0.49
NME3-211ENST00000568561 RUNX1Q01196 453 aa12.02□□□□□ -0.49
NME3-211ENST00000568561 TMEM30BQ3MIR4 351 aa12.02□□□□□ -0.49
NME3-211ENST00000568561 Q499Y3 187 aa12.02□□□□□ -0.49
NME3-211ENST00000568561 FAM27D1Q5T7N8 215 aa12.02□□□□□ -0.49
NME3-211ENST00000568561 SIGIRRQ6IA17 410 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms