RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 ZC4H2Q9NQZ6 224 aa8.62□□□□□ -1.03
TPM1-212ENST00000558347 CYTL1Q9NRR1 136 aa8.62□□□□□ -1.03
TPM1-212ENST00000558347 C1orf123Q9NWV4 160 aa8.62□□□□□ -1.03
TPM1-212ENST00000558347 EHFQ9NZC4 300 aa8.62□□□□□ -1.03
TPM1-212ENST00000558347 MPC1Q9Y5U8 109 aa8.62□□□□□ -1.03
TPM1-212ENST00000558347 TANC2Q9HCD6 1990 aa8.62□□□□□ -1.03
TPM1-212ENST00000558347 A0A1W2PP11 408 aa8.61□□□□□ -1.03
TPM1-212ENST00000558347 ANKRD30BLA7E2S9 258 aa8.61□□□□□ -1.03
TPM1-212ENST00000558347 B4DSR2 109 aa8.61□□□□□ -1.03
TPM1-212ENST00000558347 PHF1O43189 567 aaPredicted RBP8.61□□□□□ -1.03
TPM1-212ENST00000558347 APOC3P02656 99 aa8.61□□□□□ -1.03
TPM1-212ENST00000558347 CSTBP04080 98 aaKnown RBP8.61□□□□□ -1.03
TPM1-212ENST00000558347 ADH4P08319 380 aa8.61□□□□□ -1.03
TPM1-212ENST00000558347 HNF1AP20823 631 aa8.61□□□□□ -1.03
TPM1-212ENST00000558347 FUT6P51993 359 aa8.61□□□□□ -1.03
TPM1-212ENST00000558347 DVL1P1P54792 670 aaPredicted RBP8.61□□□□□ -1.03
TPM1-212ENST00000558347 SRSF2Q01130 221 aaKnown RBP8.61□□□□□ -1.03
TPM1-212ENST00000558347 SLC9A3R2Q15599 337 aa8.61□□□□□ -1.03
TPM1-212ENST00000558347 ANKRD55Q3KP44 614 aa8.61□□□□□ -1.03
TPM1-212ENST00000558347 OR2T2Q6IF00 324 aa8.61□□□□□ -1.03
TPM1-212ENST00000558347 Q6ZR03 302 aa8.61□□□□□ -1.03
TPM1-212ENST00000558347 ZSCAN4Q8NAM6 433 aaPredicted RBP8.61□□□□□ -1.03
TPM1-212ENST00000558347 AIFM2Q9BRQ8 373 aa8.61□□□□□ -1.03
TPM1-212ENST00000558347 ST6GALNAC5Q9BVH7 336 aa8.61□□□□□ -1.03
TPM1-212ENST00000558347 METTL9Q9H1A3 318 aa8.61□□□□□ -1.03
TPM1-212ENST00000558347 MMP26Q9NRE1 261 aa8.61□□□□□ -1.03
TPM1-212ENST00000558347 GPR173Q9NS66 373 aa8.61□□□□□ -1.03
TPM1-212ENST00000558347 PURGQ9UJV8 347 aaKnown RBP8.61□□□□□ -1.03
TPM1-212ENST00000558347 PCDHB10Q9UN67 800 aa8.61□□□□□ -1.03
TPM1-212ENST00000558347 WIPI2Q9Y4P8 454 aa8.61□□□□□ -1.03
TPM1-212ENST00000558347 TMEM218A2RU14 115 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 RNF212BA8MTL3 300 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 H0YIZ8 118 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 DNASE2O00115 360 aaPredicted RBP8.6□□□□□ -1.03
TPM1-212ENST00000558347 TOR1AO14656 332 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 TIMM8AO60220 97 aaPredicted RBP8.6□□□□□ -1.03
TPM1-212ENST00000558347 SERPINA2P20848 420 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 PMELP40967 661 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 RBP2P50120 134 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 PRDX4Q13162 271 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 HFEQ30201 348 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 CEACAM21Q3KPI0 293 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 C10orf91Q5T1B1 145 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 LHFPL2Q6ZUX7 228 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 C1QL2Q7Z5L3 287 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 ZDHHC23Q8IYP9 409 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 OR5A2Q8NGI9 324 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 OR1S2Q8NGQ3 325 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 SPATA3Q8NHX4 192 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 PIGCQ92535 297 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 CCL17Q92583 94 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 PAPOLGQ9BWT3 736 aaKnown RBP8.6□□□□□ -1.03
TPM1-212ENST00000558347 NKX6-2Q9C056 277 aaPredicted RBP8.6□□□□□ -1.03
TPM1-212ENST00000558347 MS4A7Q9GZW8 240 aaPredicted RBP8.6□□□□□ -1.03
TPM1-212ENST00000558347 ZNF665Q9H7R5 613 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 METTL8Q9H825 291 aaKnown RBP8.6□□□□□ -1.03
TPM1-212ENST00000558347 PCDHB16Q9NRJ7 776 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 HIF1ANQ9NWT6 349 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 DCAF16Q9NXF7 216 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 IL36GQ9NZH8 169 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 ZDHHC8Q9ULC8 765 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 SLC7A11Q9UPY5 501 aa8.6□□□□□ -1.03
TPM1-212ENST00000558347 CARHSP1Q9Y2V2 147 aaKnown RBP8.6□□□□□ -1.03
TPM1-212ENST00000558347 A0A1B0GWJ7 208 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 CRYM-AS1A6NIL9 109 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 ZNF850A8MQ14 1090 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 ATG12O94817 140 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 MSMBP08118 114 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 CD55P08174 381 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 NKAPLQ5M9Q1 402 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 PLCXD3Q63HM9 321 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 SGPP2Q8IWX5 399 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 SVBPQ8N300 66 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 CLRN3Q8NCR9 226 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 OR8G5Q8NG78 346 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 HPSE2Q8WWQ2 592 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 OR5P3Q8WZ94 311 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 TMEM186Q96B77 213 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 RRNAD1Q96FB5 475 aaKnown RBP8.59□□□□□ -1.03
TPM1-212ENST00000558347 BORCS8Q96FH0 119 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 DIRC2Q96SL1 478 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 EGLN1Q9GZT9 426 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 SLC5A7Q9GZV3 580 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 PLEKHJ1Q9NW61 149 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 IGKV1-27A0A075B6S5 117 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 PQLC2LA1A4F0 135 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 OR5B21A6NL26 309 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 ADAP1O75689 374 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 IFNA21P01568 189 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 IGHV2-5P01817 119 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 GAPDHP04406 335 aaKnown RBP8.59□□□□□ -1.03
TPM1-212ENST00000558347 H2AFB1P0C5Y9 115 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 GLRA1P23415 457 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 MTCP1P56278 107 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 TNFAIP6P98066 277 aaPredicted RBP8.59□□□□□ -1.03
TPM1-212ENST00000558347 DEFA5Q01523 94 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 SMCO1Q147U7 214 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 KRTAP24-1Q3LI83 254 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 DHRS11Q6UWP2 260 aa8.59□□□□□ -1.03
TPM1-212ENST00000558347 BHLHE23Q8NDY6 225 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms