RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 KIR3DL3Q8N743 410 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 ASCC1Q8N9N2 400 aaKnown RBP4.72□□□□□ -1.65
SCAF11-213ENST00000550629 ZNRF1Q8ND25 227 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 C19orf18Q8NEA5 215 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 TMEM185AQ8NFB2 350 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 OR5H6Q8NGV6 325 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 C8orf46Q8TAG6 207 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 ST8SIA4Q92187 359 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 DCUN1D5Q9BTE7 237 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 SHARPINQ9H0F6 387 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 KCNK15Q9H427 330 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 RAB9BQ9NP90 201 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 C12orf4Q9NQ89 552 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 PLEKHJ1Q9NW61 149 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 OR6C3Q9NZP0 311 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 CTSZQ9UBR2 303 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 MGAT4AQ9UM21 535 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 DYSFO75923 2080 aa4.72□□□□□ -1.65
SCAF11-213ENST00000550629 FLNAP21333 2647 aaKnown RBP4.71□□□□□ -1.66
SCAF11-213ENST00000550629 TRAV18A0A075B6X5 111 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 LOC105371242A0A075B767 164 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 TRGV10A0A0A0MS01 117 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 KIR2DS1A0A191URI9 304 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 hADV38S2A0JD32 116 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 ODAMA1E959 279 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 J3QLI3 93 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 CTDSP2O14595 271 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 SOCS1O15524 211 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 RGS5O15539 181 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 ENSAO43768 121 aaKnown RBP4.71□□□□□ -1.66
SCAF11-213ENST00000550629 HPGDSO60760 199 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 DIRAS3O95661 229 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 NAPSAO96009 420 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 MT-ND4P03905 459 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 EIF4EP06730 217 aaKnown RBP4.71□□□□□ -1.66
SCAF11-213ENST00000550629 MSMBP08118 114 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 PPIAL4GP0DN37 164 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 ELK1P19419 428 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 GZMHP20718 246 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 DTYMKP23919 212 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 CDK2P24941 298 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 PTBP1P26599 531 aaKnown RBP eCLIP4.71□□□□□ -1.66
SCAF11-213ENST00000550629 S100A5P33763 92 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 RBMXP38159 391 aaKnown RBP4.71□□□□□ -1.66
SCAF11-213ENST00000550629 CEBPDP49716 269 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-213ENST00000550629 SNU13P55769 128 aaKnown RBP4.71□□□□□ -1.66
SCAF11-213ENST00000550629 TMEM50BP56557 158 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 RPL31P62899 125 aaKnown RBP4.71□□□□□ -1.66
SCAF11-213ENST00000550629 MRPS10P82664 201 aaKnown RBP4.71□□□□□ -1.66
SCAF11-213ENST00000550629 MRPS15P82914 257 aaKnown RBP4.71□□□□□ -1.66
SCAF11-213ENST00000550629 PAX2Q02962 417 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 PLA2G7Q13093 441 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 TMEM249Q2WGJ8 235 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 TMEM30BQ3MIR4 351 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 CDNFQ49AH0 187 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 TMEM69Q5SWH9 247 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 TRAT1Q6PIZ9 186 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 METAP1DQ6UB28 335 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-213ENST00000550629 Q6ZS49 121 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 C1orf122Q6ZSJ8 110 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 BTN2A1Q7KYR7 527 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 C6orf201Q7Z4U5 140 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 BIVMQ86UB2 503 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 LAX1Q8IWV1 398 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 ZNF565Q8N9K5 539 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 LY6G5BQ8NDX9 201 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 OR4S1Q8NGB4 309 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 NEK7Q8TDX7 302 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 WIPF2Q8TF74 440 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-213ENST00000550629 CORO2AQ92828 525 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 ARHGAP5-AS1Q96IT6 56 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 SULT4A1Q9BR01 284 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 NICN1Q9BSH3 213 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 DCTN5Q9BTE1 182 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 FAAP24Q9BTP7 215 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 PECRQ9BY49 303 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 C6orf62Q9GZU0 229 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-213ENST00000550629 CHST6Q9GZX3 395 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 PPA2Q9H2U2 334 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 MIXL1Q9H2W2 232 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 NARFLQ9H6Q4 476 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 AUNIPQ9H7T9 357 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 LINC00574Q9H8X3 128 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 SCPEP1Q9HB40 452 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 TAS2R3Q9NYW6 316 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 OPN4Q9UHM6 478 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 RPUSD1Q9UJJ7 312 aaKnown RBP4.71□□□□□ -1.66
SCAF11-213ENST00000550629 KCNK7Q9Y2U2 307 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 UBE2J1Q9Y385 318 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-213ENST00000550629 LINC00312Q9Y6C7 94 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 MYO9AB2RTY4 2548 aa4.71□□□□□ -1.66
SCAF11-213ENST00000550629 ARID1AO14497 2285 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 MEIKINA0A087WXM9 373 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 IGHV2-70DA0A0C4DH43 119 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 A0A0G2JMP0 313 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 A0A0X1KG70 313 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 A0A1B0GW55 424 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 hCG_1809904A0A1W2PP81 198 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 A0A1W2PPE2 198 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 A0A1W2PR64 198 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms