RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 ZNF593O00488 134 aaPredicted RBP6.98□□□□□ -1.29
USP28-205ENST00000537706 MAGEB3O15480 346 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 CDK2AP2O75956 126 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 IFNA4P05014 189 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 H2BFMP0C1H6 154 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 PYCR1P32322 319 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 P2RX3P56373 397 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 PRR20EP86478 221 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 PRR20CP86479 221 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 PRR20DP86480 221 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 PRR20BP86481 221 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 PRR20AP86496 221 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 FABP5Q01469 135 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 IFITM3Q01628 133 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 EBI3Q14213 229 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 SLC35D3Q5M8T2 416 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 FAM53AQ6NSI3 398 aaPredicted RBP6.98□□□□□ -1.29
USP28-205ENST00000537706 BAIAP2L2Q6UXY1 529 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 PLEKHG7Q6ZR37 379 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 LYG2Q86SG7 212 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 BATF2Q8N1L9 274 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 PARP16Q8N5Y8 322 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 OR10H4Q8NGA5 316 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 OR2K2Q8NGT1 345 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 TMEM203Q969S6 136 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 EAF1Q96JC9 268 aaPredicted RBP6.98□□□□□ -1.29
USP28-205ENST00000537706 CNN2Q99439 309 aaKnown RBP6.98□□□□□ -1.29
USP28-205ENST00000537706 S1PR3Q99500 378 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 NEURL2Q9BR09 285 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 OR51V1Q9H2C8 321 aa6.98□□□□□ -1.29
USP28-205ENST00000537706 CDRT1O95170 752 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 CELP19835 753 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 ZP3P21754 424 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 NFYBP25208 207 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 BLVRAP53004 296 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 RIPPLY1Q0D2K3 151 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 TRAM1Q15629 374 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 COMMD2Q86X83 199 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 LAX1Q8IWV1 398 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 IZUMO1Q8IYV9 350 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 Q8N1X5 172 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 ZFP41Q8N8Y5 198 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 AP3S1Q92572 193 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 CEP19Q96LK0 163 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 OVOL2Q9BRP0 275 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 CCDC32Q9BV29 185 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 NMNAT2Q9BZQ4 307 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 BABAM2Q9NXR7 383 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 KMT2AQ03164 3969 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 A0A087X0M5 115 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 A0A1B0GX30 115 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 TMEM82A0PJX8 343 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 GABRPO00591 440 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 NRASP01111 189 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 GAPDHP04406 335 aaKnown RBP6.97□□□□□ -1.29
USP28-205ENST00000537706 MRPL3P09001 348 aaKnown RBP6.97□□□□□ -1.29
USP28-205ENST00000537706 CLUP10909 449 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 SDC2P34741 201 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 ZNF85Q03923 595 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 TMEM177Q53S58 311 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 TEX30Q5JUR7 227 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 PRSS45Q7RTY3 260 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 ZNF575Q86XF7 245 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 SNX29P2Q8IUI4 249 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 LYSMD2Q8IV50 215 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 SYS1Q8N2H4 156 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 OR10X1Q8NGY0 326 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 CORO2AQ92828 525 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 MRPL48Q96GC5 212 aaKnown RBP6.97□□□□□ -1.29
USP28-205ENST00000537706 TBX5Q99593 518 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 CHST6Q9GZX3 395 aa6.97□□□□□ -1.29
USP28-205ENST00000537706 ISG20L2Q9H9L3 353 aaKnown RBP6.97□□□□□ -1.29
USP28-205ENST00000537706 TRAV41A0A0B4J266 112 aa6.96□□□□□ -1.3
USP28-205ENST00000537706 A0A1W2PQL4 384 aaPredicted RBP6.96□□□□□ -1.3
USP28-205ENST00000537706 J3QR06 171 aa6.96□□□□□ -1.3
USP28-205ENST00000537706 CTDSP2O14595 271 aa6.96□□□□□ -1.3
USP28-205ENST00000537706 PTTG1O95997 202 aa6.96□□□□□ -1.3
USP28-205ENST00000537706 HAND1O96004 215 aa6.96□□□□□ -1.3
USP28-205ENST00000537706 MOSP00540 346 aa6.96□□□□□ -1.3
USP28-205ENST00000537706 IGLV1-40P01703 118 aa6.96□□□□□ -1.3
USP28-205ENST00000537706 GYPBP06028 91 aa6.96□□□□□ -1.3
USP28-205ENST00000537706 OR2T7P0C7T2 308 aa6.96□□□□□ -1.3
USP28-205ENST00000537706 SPI1P17947 270 aa6.96□□□□□ -1.3
USP28-205ENST00000537706 TNFSF8P32971 234 aa6.96□□□□□ -1.3
USP28-205ENST00000537706 NPBWR2P48146 333 aa6.96□□□□□ -1.3
USP28-205ENST00000537706 MXD1Q05195 221 aa6.96□□□□□ -1.3
USP28-205ENST00000537706 TATDN3Q17R31 274 aa6.96□□□□□ -1.3
USP28-205ENST00000537706 DDI2Q5TDH0 399 aa6.96□□□□□ -1.3
USP28-205ENST00000537706 STEAP3Q658P3 488 aa6.96□□□□□ -1.3
USP28-205ENST00000537706 LYPD4Q6UWN0 246 aa6.96□□□□□ -1.3
USP28-205ENST00000537706 DEFB125Q8N687 156 aa6.96□□□□□ -1.3
USP28-205ENST00000537706 HSPB9Q9BQS6 159 aa6.96□□□□□ -1.3
USP28-205ENST00000537706 THAP7Q9BT49 309 aaPredicted RBP6.96□□□□□ -1.3
USP28-205ENST00000537706 PKIBQ9C010 78 aa6.96□□□□□ -1.3
USP28-205ENST00000537706 TINAGL1Q9GZM7 467 aaPredicted RBP6.96□□□□□ -1.3
USP28-205ENST00000537706 SEBOXQ9HB31 216 aaPredicted RBP6.96□□□□□ -1.3
USP28-205ENST00000537706 ZNF319Q9P2F9 582 aa6.96□□□□□ -1.3
USP28-205ENST00000537706 V9GYH0 126 aa6.96□□□□□ -1.3
USP28-205ENST00000537706 ZNF729A6NN14 1252 aaPredicted RBP6.95□□□□□ -1.3
USP28-205ENST00000537706 RGS5O15539 181 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms