RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 SMIM30A4D0T7 59 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 HELTA6NFD8 242 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 SERPINE3A8MV23 424 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 LEUTXA8MZ59 168 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 ZNF878C9JN71 531 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 AP4M1O00189 453 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 ITGB1BP1O14713 200 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 ENTPD6O75354 484 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 DFFBO76075 338 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 LY6G6CO95867 125 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 CST4P01036 141 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 ELANEP08246 267 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 CD36P16671 472 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 C21orf33P30042 268 aaPredicted RBP3.82□□□□□ -1.8
SDCBP-207ENST00000520168 DCTDP32321 178 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 MNDAP41218 407 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 GPR12P47775 334 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 OMPP47874 163 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 GNG10P50151 68 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 BCAP31P51572 246 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 DLX6P56179 175 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 ACTA2P62736 377 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 GNG3P63215 75 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 ACTG2P63267 376 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 ACTC1P68032 377 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 ACTA1P68133 377 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 BDH1Q02338 343 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 MEF2CQ06413 473 aaPredicted RBP3.82□□□□□ -1.8
SDCBP-207ENST00000520168 SLAQ13239 276 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 FOXE3Q13461 319 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 ZNF273Q14593 569 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 ZNF846Q147U1 533 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 TAF13Q15543 124 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 PNLIPRP3Q17RR3 467 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 TRIM16LQ309B1 348 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 LDLRAD2Q5SZI1 272 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 TMEM236Q5W0B7 351 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 OTPQ5XKR4 325 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 OR52W1Q6IF63 320 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 RPL13AP3Q6NVV1 102 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 SMARCD3Q6STE5 483 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 SLC16A12Q6ZSM3 486 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 C18orf65Q6ZTR6 163 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 LYSMD2Q8IV50 215 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 GID4Q8IVV7 300 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 SGPP2Q8IWX5 399 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 ZDHHC23Q8IYP9 409 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 STPG2Q8N412 459 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 ZNF676Q8N7Q3 588 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 TCEANCQ8N8B7 351 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 PROKR2Q8NFJ6 384 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 OR4M1Q8NGD0 313 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 OR4P4Q8NGL7 312 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 TMEM163Q8TC26 289 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 C4orf3Q8WVX3 66 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 OR5P3Q8WZ94 311 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 RPL3LQ92901 407 aaKnown RBP3.82□□□□□ -1.8
SDCBP-207ENST00000520168 BORCS5Q969J3 196 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 ST6GALNAC6Q969X2 333 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 C5orf30Q96GV9 206 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 ZNF479Q96JC4 524 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 C16orf92Q96LL3 132 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 DUX3Q96PT4 197 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 HIST1H2AAQ96QV6 131 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 IL4I1Q96RQ9 567 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 DCUN1D5Q9BTE7 237 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 MND1Q9BWT6 205 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 TSSK6Q9BXA6 273 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 NAA50Q9GZZ1 169 aaKnown RBP3.82□□□□□ -1.8
SDCBP-207ENST00000520168 TMEM133Q9H2Q1 129 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 AUNIPQ9H7T9 357 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 HMG20AQ9NP66 347 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 FGF20Q9NP95 211 aaPredicted RBP3.82□□□□□ -1.8
SDCBP-207ENST00000520168 ISYNA1Q9NPH2 558 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 DPM3Q9P2X0 92 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 B9D1Q9UPM9 204 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 RNF24Q9Y225 148 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 KCNK7Q9Y2U2 307 aa3.82□□□□□ -1.8
SDCBP-207ENST00000520168 EXOSC1Q9Y3B2 195 aaKnown RBP3.82□□□□□ -1.8
SDCBP-207ENST00000520168 MUC4Q99102 2169 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 hADV38S2A0JD32 116 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 UNC119BA6NIH7 251 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 OR5B21A6NL26 309 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 RFPL4AA6NLU0 287 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 RFPL4AL1F8VTS6 287 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 K7N7A8 449 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 DCTN6O00399 190 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 CDC42EP2O14613 210 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 ARPC3O15145 178 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 AIREO43918 545 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 ACTL6BO94805 426 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 TNFRSF6BO95407 300 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 FADS2O95864 444 aaKnown RBP3.81□□□□□ -1.8
SDCBP-207ENST00000520168 IGHG2P01859 326 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 ANXA2P07355 339 aaKnown RBP3.81□□□□□ -1.8
SDCBP-207ENST00000520168 OCMP0CE72 109 aaPredicted RBP3.81□□□□□ -1.8
SDCBP-207ENST00000520168 IGHV4-30-4P0DP06 118 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 RPA2P15927 270 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 MYL12AP19105 171 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 PSMA1P25786 263 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms