RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 SSBP1Q04837 148 aaKnown RBP3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 BCL2L1Q07817 233 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 PSG5Q15238 335 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 TAF13Q15543 124 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 TGIF1Q15583 401 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 SLC25A52Q3SY17 297 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 LRRC73Q5JTD7 316 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 CPTPQ5TA50 214 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 RTL6Q6ICC9 239 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 TNFAIP8L2Q6P589 184 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 RNASEKQ6P5S7 137 aaKnown RBP3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 BTNL8Q6UX41 500 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 TMEM184AQ6ZMB5 413 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 NEGR1Q7Z3B1 354 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 SCD5Q86SK9 330 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 TMPRSS12Q86WS5 348 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 TMEM173Q86WV6 379 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 ZNF440Q8IYI8 595 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 UBALD2Q8IYN6 164 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 DOCK3Q8IZD9 2030 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 RNF175Q8N4F7 328 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 ACOT4Q8N9L9 421 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 LRRC75AQ8NAA5 344 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 NPEPL1Q8NDH3 523 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR4K17Q8NGC6 315 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR51T1Q8NGJ9 327 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR2AE1Q8NHA4 323 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 MFSD8Q8NHS3 518 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 LYPD6BQ8NI32 183 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 IL22RA2Q969J5 263 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 PTX4Q96A99 478 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 TVP23CQ96ET8 276 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR10C1Q96KK4 312 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 ZNF75AQ96N20 296 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 IP6K3Q96PC2 410 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 AP1S3Q96PC3 154 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 CABLES2Q9BTV7 478 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 RSPO3Q9BXY4 272 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 EGLN3Q9H6Z9 239 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 PIGVQ9NUD9 493 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 SLC23A2Q9UGH3 650 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 VPREB3Q9UKI3 123 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 NXT1Q9UKK6 140 aaKnown RBP3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 FUT9Q9Y231 359 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 CSDC2Q9Y534 153 aaKnown RBP3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 TCF20Q9UGU0 1960 aaKnown RBP3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 LOC100509620A0A075B734 347 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 IGHV2-26A0A0B4J1V2 119 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 MYBPHLA2RUH7 354 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 TMEM189A5PLL7 270 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 FTCDNL1E5RQL4 147 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 M0R1X1 148 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 SIRPB1O00241 398 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 AGPAT2O15120 278 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 CEACAM4O75871 244 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 DUS4LO95620 317 aaKnown RBP3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 IGHV4-39P01824 125 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 IGHG3P01860 377 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 MAS1P04201 325 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 GAPDHP04406 335 aaKnown RBP3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 FAM157CP0CG43 387 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 TCN2P20062 427 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 RPS4Y1P22090 263 aaKnown RBP3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 PRKACGP22612 351 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 NPY1RP25929 384 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 ADORA2BP29275 332 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 KIR2DS4P43632 304 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 UQCRFS1P47985 274 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 DNASE1L1P49184 302 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 PRLHRP49683 370 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 H2BFSP57053 126 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 TAS2R31P59538 309 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 TAS2R20P59543 309 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 LCN6P62502 163 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 HIST1H1AQ02539 215 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 ACVR1Q04771 509 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 PLCXD2Q0VAA5 305 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 GAGE2BQ13066 116 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 ZNF266Q14584 549 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 MMDQ15546 238 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 ITPRIPL2Q3MIP1 535 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 GAGE2EQ4V326 116 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 DCST2Q5T1A1 773 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 LCN10Q6JVE6 187 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 GAGE2AQ6NT46 116 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 NIPAL3Q6P499 406 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 AGTRAPQ6RW13 159 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 ASCL4Q6XD76 172 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 GKN2Q86XP6 184 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 MARCH9Q86YJ5 346 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 SYS1Q8N2H4 156 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 OR4K1Q8NGD4 311 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 OR52R1Q8NGF1 315 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 OR10G4Q8NGN3 311 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 OR1B1Q8NGR6 318 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 FCAMRQ8WWV6 532 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 DAZLQ92904 295 aaKnown RBP3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 ZNF582Q96NG8 517 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 TNFRSF13CQ96RJ3 184 aa3.9□□□□□ -1.79
HMGB3P13-201ENST00000511263 NKX3-1Q99801 234 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms