RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459		Q8N2B8	174 aa		11.31	□□□□□ -0.6
CCHCR1-222	ENST00000507459	LINC00311	Q8N616	119 aa		11.31	□□□□□ -0.6
CCHCR1-222	ENST00000507459	OR52L2P	Q8NGH6	319 aa		11.31	□□□□□ -0.6
CCHCR1-222	ENST00000507459	RBM14	Q96PK6	669 aa	Known RBP	11.31	□□□□□ -0.6
CCHCR1-222	ENST00000507459	OCSTAMP	Q9BR26	566 aa		11.31	□□□□□ -0.6
CCHCR1-222	ENST00000507459	MBNL3	Q9NUK0	354 aa	Known RBP	11.31	□□□□□ -0.6
CCHCR1-222	ENST00000507459	IGHV3-72	A0A0B4J1Y9	119 aa		11.3	□□□□□ -0.6
CCHCR1-222	ENST00000507459	TRAV1-2	A0A0B4J238	106 aa		11.3	□□□□□ -0.6
CCHCR1-222	ENST00000507459	GAPDH	P04406	335 aa	Known RBP	11.3	□□□□□ -0.6
CCHCR1-222	ENST00000507459	IL3RA	P26951	378 aa		11.3	□□□□□ -0.6
CCHCR1-222	ENST00000507459	VDAC2	P45880	294 aa	Predicted RBP	11.3	□□□□□ -0.6
CCHCR1-222	ENST00000507459	ZNF134	P52741	427 aa		11.3	□□□□□ -0.6
CCHCR1-222	ENST00000507459	C9orf152	Q5JTZ5	239 aa		11.3	□□□□□ -0.6
CCHCR1-222	ENST00000507459	ZNF773	Q6PK81	442 aa		11.3	□□□□□ -0.6
CCHCR1-222	ENST00000507459	CD200R1L	Q6Q8B3	271 aa		11.3	□□□□□ -0.6
CCHCR1-222	ENST00000507459	OR8H3	Q8N146	312 aa		11.3	□□□□□ -0.6
CCHCR1-222	ENST00000507459	CFHR4	Q92496	578 aa		11.3	□□□□□ -0.6
CCHCR1-222	ENST00000507459	FCGR1B	Q92637	280 aa		11.3	□□□□□ -0.6
CCHCR1-222	ENST00000507459	STEAP1	Q9UHE8	339 aa		11.3	□□□□□ -0.6
CCHCR1-222	ENST00000507459	MGAM2	Q2M2H8	2515 aa		11.3	□□□□□ -0.6
CCHCR1-222	ENST00000507459	IGHV1-3	A0A0C4DH29	117 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	TMEM272	A0A1B0GTI8	110 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	SMIM30	A4D0T7	59 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	FAM90A9P	A6NNJ1	464 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	IGKV1D-33	P01593	117 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	IGKV1-33	P01594	117 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	LPL	P06858	475 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	TMEM11	P17152	192 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	RAB3B	P20337	219 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	PPP1CC	P36873	323 aa	Known RBP	11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	ZNF816	Q0VGE8	651 aa	Predicted RBP	11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	PLA2G7	Q13093	441 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	GNMT	Q14749	295 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	TMEM30B	Q3MIR4	351 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	MORN2	Q502X0	79 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	CT45A1	Q5HYN5	189 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	THNSL2	Q86YJ6	484 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	FAM89B	Q8N5H3	189 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	C8orf31	Q8N9H6	132 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	ZNF439	Q8NDP4	499 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	CT45A3	Q8NHU0	189 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	IL1F10	Q8WWZ1	152 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	GALM	Q96C23	342 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	HDHD3	Q9BSH5	251 aa	Predicted RBP	11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	ABRACL	Q9P1F3	81 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	AK3	Q9UIJ7	227 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	WNK1	Q9H4A3	2382 aa		11.29	□□□□□ -0.6
CCHCR1-222	ENST00000507459	TET2	Q6N021	2002 aa	Predicted RBP	11.28	□□□□□ -0.6
CCHCR1-222	ENST00000507459		A0A0B4J203	849 aa		11.28	□□□□□ -0.6
CCHCR1-222	ENST00000507459	IFITM5	A6NNB3	132 aa		11.28	□□□□□ -0.6
CCHCR1-222	ENST00000507459	TSPAN15	O95858	294 aa		11.28	□□□□□ -0.6
CCHCR1-222	ENST00000507459	AMY1A	P04745	511 aa		11.28	□□□□□ -0.6
CCHCR1-222	ENST00000507459	AMY2A	P04746	511 aa		11.28	□□□□□ -0.6
CCHCR1-222	ENST00000507459	RANBP1	P43487	201 aa		11.28	□□□□□ -0.6
CCHCR1-222	ENST00000507459	TMEM50B	P56557	158 aa		11.28	□□□□□ -0.6
CCHCR1-222	ENST00000507459	NEDD8	Q15843	81 aa		11.28	□□□□□ -0.6
CCHCR1-222	ENST00000507459		Q3ZCU0	254 aa		11.28	□□□□□ -0.6
CCHCR1-222	ENST00000507459	SLC25A48	Q6ZT89	311 aa	Known RBP	11.28	□□□□□ -0.6
CCHCR1-222	ENST00000507459	ZNF554	Q86TJ5	538 aa		11.28	□□□□□ -0.6
CCHCR1-222	ENST00000507459	LYG1	Q8N1E2	194 aa		11.28	□□□□□ -0.6
CCHCR1-222	ENST00000507459	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.28	□□□□□ -0.6
CCHCR1-222	ENST00000507459	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	11.28	□□□□□ -0.6
CCHCR1-222	ENST00000507459	ARHGAP5-AS1	Q96IT6	56 aa		11.28	□□□□□ -0.6
CCHCR1-222	ENST00000507459	PECR	Q9BY49	303 aa		11.28	□□□□□ -0.6
CCHCR1-222	ENST00000507459	TXNL4B	Q9NX01	149 aa	Known RBP	11.28	□□□□□ -0.6
CCHCR1-222	ENST00000507459	RAB22A	Q9UL26	194 aa		11.28	□□□□□ -0.6
CCHCR1-222	ENST00000507459	STUB1	Q9UNE7	303 aa		11.28	□□□□□ -0.6
CCHCR1-222	ENST00000507459	MOB4	Q9Y3A3	225 aa		11.28	□□□□□ -0.6
CCHCR1-222	ENST00000507459	LDLRAD4	O15165	306 aa		11.27	□□□□□ -0.61
CCHCR1-222	ENST00000507459	FBXO24	O75426	580 aa		11.27	□□□□□ -0.61
CCHCR1-222	ENST00000507459	NAPSA	O96009	420 aa		11.27	□□□□□ -0.61
CCHCR1-222	ENST00000507459	CSF1	P09603	554 aa		11.27	□□□□□ -0.61
CCHCR1-222	ENST00000507459	CD28	P10747	220 aa		11.27	□□□□□ -0.61
CCHCR1-222	ENST00000507459	GAL	P22466	123 aa		11.27	□□□□□ -0.61
CCHCR1-222	ENST00000507459	HTD2	P86397	168 aa		11.27	□□□□□ -0.61
CCHCR1-222	ENST00000507459	HMGN3	Q15651	99 aa		11.27	□□□□□ -0.61
CCHCR1-222	ENST00000507459	C2orf68	Q2NKX9	166 aa		11.27	□□□□□ -0.61
CCHCR1-222	ENST00000507459		Q6ZPA2	131 aa		11.27	□□□□□ -0.61
CCHCR1-222	ENST00000507459	TGIF2LX	Q8IUE1	241 aa		11.27	□□□□□ -0.61
CCHCR1-222	ENST00000507459	OR56B1	Q8NGI3	324 aa		11.27	□□□□□ -0.61
CCHCR1-222	ENST00000507459	ST6GALNAC6	Q969X2	333 aa		11.27	□□□□□ -0.61
CCHCR1-222	ENST00000507459	RBMXL1	Q96E39	390 aa	Known RBP	11.27	□□□□□ -0.61
CCHCR1-222	ENST00000507459	OR51E2	Q9H255	320 aa		11.27	□□□□□ -0.61
CCHCR1-222	ENST00000507459	MMP27	Q9H306	513 aa		11.27	□□□□□ -0.61
CCHCR1-222	ENST00000507459	JPT1	Q9UK76	154 aa		11.27	□□□□□ -0.61
CCHCR1-222	ENST00000507459	HSF4	Q9ULV5	492 aa		11.27	□□□□□ -0.61
CCHCR1-222	ENST00000507459	SSR3	Q9UNL2	185 aa		11.27	□□□□□ -0.61
CCHCR1-222	ENST00000507459	PKD1L1	Q8TDX9	2849 aa		11.27	□□□□□ -0.61
CCHCR1-222	ENST00000507459	NCBP2L	A6PVI3	153 aa	Known RBP	11.26	□□□□□ -0.61
CCHCR1-222	ENST00000507459	FOXI3	A8MTJ6	420 aa	Predicted RBP	11.26	□□□□□ -0.61
CCHCR1-222	ENST00000507459	ZNF736	B4DX44	427 aa	Predicted RBP	11.26	□□□□□ -0.61
CCHCR1-222	ENST00000507459		M0QZK8	103 aa		11.26	□□□□□ -0.61
CCHCR1-222	ENST00000507459	YPEL1	O60688	119 aa		11.26	□□□□□ -0.61
CCHCR1-222	ENST00000507459	RGS11	O94810	467 aa		11.26	□□□□□ -0.61
CCHCR1-222	ENST00000507459	SLC2A2	P11168	524 aa	Predicted RBP	11.26	□□□□□ -0.61
CCHCR1-222	ENST00000507459	NSUN5P1	Q3KNT7	163 aa		11.26	□□□□□ -0.61
CCHCR1-222	ENST00000507459	KCTD21	Q4G0X4	260 aa		11.26	□□□□□ -0.61
CCHCR1-222	ENST00000507459	PLAC9	Q5JTB6	97 aa		11.26	□□□□□ -0.61
CCHCR1-222	ENST00000507459	STEAP3	Q658P3	488 aa		11.26	□□□□□ -0.61
CCHCR1-222	ENST00000507459	ZNF880	Q6PDB4	577 aa		11.26	□□□□□ -0.61

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