RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 PRAP1Q96NZ9 151 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 OR2A5Q96R48 311 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 PRSS27Q9BQR3 290 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 OR51I1Q9H343 314 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 HMG20AQ9NP66 347 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 XPNPEP1Q9NQW7 623 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 POLR1DQ9Y2S0 133 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 ZNF337Q9Y3M9 751 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 MARF1Q9Y4F3 1742 aaKnown RBP2.92□□□□□ -1.94
VPS13D-207ENST00000476169 FAM208AQ9UK61 1670 aaKnown RBP2.92□□□□□ -1.94
VPS13D-207ENST00000476169 CARMIL3Q8ND23 1372 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 A0A0U1RQV1 116 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 CENPVL3A0A0U1RRI6 287 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 MYBPHLA2RUH7 354 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 C9JQL5 133 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 LGALS9O00182 355 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 UPK1AO00322 258 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 PHOX2AO14813 284 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 GYG2O15488 501 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 SLC37A4O43826 429 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 CNMDO75829 334 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 SCO1O75880 301 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 IGLV2-8P01709 118 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 FABP1P07148 127 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 IL3P08700 152 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 SNRPAP09012 282 aaKnown RBP2.91□□□□□ -1.94
VPS13D-207ENST00000476169 OR4A8P0C604 315 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 IGHV1-8P0DP01 117 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 ADRB3P13945 408 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 ZNF17P17021 662 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 CXCL2P19875 107 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 ELK4P28324 431 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 SLC6A1P30531 599 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 MAGEA12P43365 314 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 DSCR10P59022 87 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 HPCAP84074 193 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 SKP2Q13309 424 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 PAFAH1B3Q15102 231 aaKnown RBP2.91□□□□□ -1.94
VPS13D-207ENST00000476169 ELOCQ15369 112 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 TMEM241Q24JQ0 296 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 YIF1BQ5BJH7 314 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 CLLU1OSQ5K130 101 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 SPATA31B1PQ5VZV4 182 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 OTPQ5XKR4 325 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 NIT1Q86X76 327 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 GPR32P1Q8NGA4 272 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 OR4K5Q8NGD3 323 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 LINC01006Q8NI28 216 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 ASB17Q8WXJ9 295 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 AP3S1Q92572 193 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 FAM104AQ969W3 186 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 TMBIM1Q969X1 311 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 TAMM41Q96BW9 452 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 ZNF649Q9BS31 505 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 EBPLQ9BY08 206 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 IFI27L2Q9H2X8 130 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 C12orf10Q9HB07 376 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 IL37Q9NZH6 218 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 VPS29Q9UBQ0 182 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 C14orf166Q9Y224 244 aaKnown RBP2.91□□□□□ -1.94
VPS13D-207ENST00000476169 CACNG2Q9Y698 323 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 MYOM1P52179 1685 aa2.91□□□□□ -1.94
VPS13D-207ENST00000476169 IGHV2-26A0A0B4J1V2 119 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 TEX50A0A1B0GTY4 177 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 TMEM72A0PK05 275 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 CLDN24A6NM45 220 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 M0QYV0 167 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 PSMD12O00232 456 aaPredicted RBP2.9□□□□□ -1.95
VPS13D-207ENST00000476169 PGRMC1O00264 195 aaKnown RBP2.9□□□□□ -1.95
VPS13D-207ENST00000476169 KPNA3O00505 521 aaPredicted RBP2.9□□□□□ -1.95
VPS13D-207ENST00000476169 ANGPTL7O43827 346 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 GCM2O75603 506 aaPredicted RBP2.9□□□□□ -1.95
VPS13D-207ENST00000476169 APCSP02743 223 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 IL6P05231 212 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 RPSAP08865 295 aaKnown RBP2.9□□□□□ -1.95
VPS13D-207ENST00000476169 PSG2P11465 335 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 S100A2P29034 98 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 MP68P56378 58 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 H2BFSP57053 126 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 SPCS3P61009 180 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 RAB14P61106 215 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 MAPK14Q16539 360 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 HIST3H3Q16695 136 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 FAM222AQ5U5X8 452 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 SCGB1D4Q6XE38 83 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 SLC16A13Q7RTY0 426 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 DOLPP1Q86YN1 238 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 SLC25A45Q8N413 288 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 CLDN22Q8N7P3 220 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 SLC25A29Q8N8R3 303 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 EEF1AKMT1Q8WVE0 214 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 ZIM3Q96PE6 472 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 PYGO2Q9BRQ0 406 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 TXNIPQ9H3M7 391 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 RPS10P5Q9NQ39 176 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 TNFRSF19Q9NS68 423 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 SLC7A10Q9NS82 523 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 GID8Q9NWU2 228 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 TAS2R5Q9NYW4 299 aa2.9□□□□□ -1.95
VPS13D-207ENST00000476169 GLTPQ9NZD2 209 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms