RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 BLVRBP30043 206 aaPredicted RBP3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 PITPNAQ00169 270 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 ZNF85Q03923 595 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 LSAMPQ13449 338 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 MMDQ15546 238 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 ZSCAN26Q16670 478 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 Q3ZCU0 254 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 ZNF691Q5VV52 312 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 SLC25A48Q6ZT89 311 aaKnown RBP3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 SGPP2Q8IWX5 399 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 AQP12AQ8IXF9 295 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 PXT1Q8NFP0 134 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 OR13C3Q8NGS6 347 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 CASTOR1Q8WTX7 329 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 ARL11Q969Q4 196 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 EME1Q96AY2 570 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 NRBF2Q96F24 287 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 WDR89Q96FK6 387 aaPredicted RBP3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 RITA1Q96K30 269 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 OR4C12Q96R67 309 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 DPCDQ9BVM2 203 aaPredicted RBP3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 FAM118AQ9NWS6 357 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 MRPS28Q9Y2Q9 187 aaKnown RBP3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 ARL2BPQ9Y2Y0 163 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 FBXO7Q9Y3I1 522 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 ABCA13Q86UQ4 5058 aa3.93□□□□□ -1.78
SNRNP40-204ENST00000474025 A0A1W2PN81 502 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 OR4C45A6NMZ5 311 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 C12orf77C9JDV5 145 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 J3QRE1 110 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 GABRPO00591 440 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 SLC16A6O15403 523 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 SULT1B1O43704 296 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 LANCL1O43813 399 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 FKBP6O75344 327 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 OR7C1O76099 320 aaPredicted RBP3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 FAM107AO95990 144 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 HSPB1P04792 205 aaKnown RBP3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 ARSBP15848 533 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 ATP6V1E1P36543 226 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 CHRNA7P36544 502 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 CCR9P51686 369 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 ZNF134P52741 427 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 CRIP2P52943 208 aaPredicted RBP3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 RBM11P57052 281 aaKnown RBP3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 ACTBP60709 375 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 TMED1Q13445 227 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 ECSCRQ19T08 205 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 C5orf64Q2M2E5 130 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 HSP90B2PQ58FF3 399 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 CT45A1Q5HYN5 189 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 NHLRC3Q5JS37 347 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 LPCAT4Q643R3 524 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 KDM4DQ6B0I6 523 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 ASCL4Q6XD76 172 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 ZNF497Q6ZNH5 498 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 SERPINA12Q8IW75 414 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 PARP16Q8N5Y8 322 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 SUMF2Q8NBJ7 301 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 OR10V1Q8NGI7 309 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 OR10K1Q8NGX5 313 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 CT45A3Q8NHU0 189 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 TNFAIP8L1Q8WVP5 186 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 LINC00476Q8WZB0 136 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 PELI1Q96FA3 418 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 MISP3Q96FF7 219 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 CCDC140Q96MF4 163 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 FAM110AQ9BQ89 295 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 THAP7Q9BT49 309 aaPredicted RBP3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 ANKRD60Q9BZ19 345 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 RETNQ9HD89 108 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 MED4Q9NPJ6 270 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 STUB1Q9UNE7 303 aa3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 FOXA2Q9Y261 457 aaPredicted RBP3.92□□□□□ -1.78
SNRNP40-204ENST00000474025 TCRBV3S1A0A5B6 114 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 GEMIN2O14893 280 aaKnown RBP3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 ARPC1BO15143 372 aaKnown RBP3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 NBR2O15453 112 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 ORC5O43913 435 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 NDUFA3O95167 84 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 IGHV3-11P01762 117 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 MT-ND4P03905 459 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 HTR1AP08908 422 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 T-ENOLP0DO92 83 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 EGR2P11161 476 aaPredicted RBP3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 RAB6AP20340 208 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 POLR2IP36954 125 aaKnown RBP3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 RAB40BQ12829 278 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 ALKBH1Q13686 389 aaKnown RBP3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 FLOT2Q14254 428 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 RSU1Q15404 277 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 LRRC36Q1X8D7 754 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 TMEM30BQ3MIR4 351 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 STEAP3Q658P3 488 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 PYHIN1Q6K0P9 492 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 ZNF529Q6P280 563 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 KCTD20Q7Z5Y7 419 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 LINC00596Q86U02 117 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 SPATA24Q86W54 205 aa3.91□□□□□ -1.78
SNRNP40-204ENST00000474025 ANKRD13BQ86YJ7 626 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms