RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 MOB3BQ86TA1 216 aa17.28■□□□□ 0.36
LIME1-203ENST00000465591 C5orf56Q8N8D9 126 aa17.28■□□□□ 0.36
LIME1-203ENST00000465591 CT45A3Q8NHU0 189 aa17.28■□□□□ 0.36
LIME1-203ENST00000465591 R3HDM4Q96D70 268 aa17.28■□□□□ 0.36
LIME1-203ENST00000465591 TAF9BQ9HBM6 251 aa17.28■□□□□ 0.36
LIME1-203ENST00000465591 ISYNA1Q9NPH2 558 aa17.28■□□□□ 0.36
LIME1-203ENST00000465591 A0A0A6YYD4 124 aa17.27■□□□□ 0.36
LIME1-203ENST00000465591 M0QZK8 103 aa17.27■□□□□ 0.36
LIME1-203ENST00000465591 SPINT2O43291 252 aa17.27■□□□□ 0.36
LIME1-203ENST00000465591 CA11O75493 328 aa17.27■□□□□ 0.36
LIME1-203ENST00000465591 GAPDHP04406 335 aaKnown RBP17.27■□□□□ 0.36
LIME1-203ENST00000465591 CPEP16870 476 aa17.27■□□□□ 0.36
LIME1-203ENST00000465591 GABARAPL2P60520 117 aa17.27■□□□□ 0.36
LIME1-203ENST00000465591 EMX1Q04741 257 aaPredicted RBP17.27■□□□□ 0.36
LIME1-203ENST00000465591 MLLT11Q13015 90 aaPredicted RBP17.27■□□□□ 0.36
LIME1-203ENST00000465591 EBI3Q14213 229 aa17.27■□□□□ 0.36
LIME1-203ENST00000465591 GNMTQ14749 295 aa17.27■□□□□ 0.36
LIME1-203ENST00000465591 Q6ZPA2 131 aa17.27■□□□□ 0.36
LIME1-203ENST00000465591 SLC25A48Q6ZT89 311 aaKnown RBP17.27■□□□□ 0.36
LIME1-203ENST00000465591 C6orf201Q7Z4U5 140 aa17.27■□□□□ 0.36
LIME1-203ENST00000465591 RTN4IP1Q8WWV3 396 aaPredicted RBP17.27■□□□□ 0.36
LIME1-203ENST00000465591 TMEM59Q9BXS4 323 aa17.27■□□□□ 0.36
LIME1-203ENST00000465591 GNG12Q9UBI6 72 aa17.27■□□□□ 0.36
LIME1-203ENST00000465591 LRRC42Q9Y546 428 aa17.27■□□□□ 0.36
LIME1-203ENST00000465591 TMEM14DPA8MWL7 114 aa17.26■□□□□ 0.35
LIME1-203ENST00000465591 ZNF736B4DX44 427 aaPredicted RBP17.26■□□□□ 0.35
LIME1-203ENST00000465591 MRPS14O60783 128 aaKnown RBP17.26■□□□□ 0.35
LIME1-203ENST00000465591 Q3ZCU0 254 aa17.26■□□□□ 0.35
LIME1-203ENST00000465591 SAMD5Q5TGI4 173 aa17.26■□□□□ 0.35
LIME1-203ENST00000465591 Q8N6K4 173 aa17.26■□□□□ 0.35
LIME1-203ENST00000465591 OR52L2PQ8NGH6 319 aa17.26■□□□□ 0.35
LIME1-203ENST00000465591 EAF1Q96JC9 268 aaPredicted RBP17.26■□□□□ 0.35
LIME1-203ENST00000465591 MGLLQ99685 303 aa17.26■□□□□ 0.35
LIME1-203ENST00000465591 FAAP24Q9BTP7 215 aa17.26■□□□□ 0.35
LIME1-203ENST00000465591 TM2D1Q9BX74 207 aa17.26■□□□□ 0.35
LIME1-203ENST00000465591 AK6Q9Y3D8 172 aaKnown RBP17.26■□□□□ 0.35
LIME1-203ENST00000465591 FABP5Q01469 135 aa17.25■□□□□ 0.35
LIME1-203ENST00000465591 P2RY14Q15391 338 aa17.25■□□□□ 0.35
LIME1-203ENST00000465591 BEAN1Q3B7T3 259 aa17.25■□□□□ 0.35
LIME1-203ENST00000465591 TRAT1Q6PIZ9 186 aa17.25■□□□□ 0.35
LIME1-203ENST00000465591 IZUMO1Q8IYV9 350 aa17.25■□□□□ 0.35
LIME1-203ENST00000465591 KCNG3Q8TAE7 436 aa17.25■□□□□ 0.35
LIME1-203ENST00000465591 FGF16O43320 207 aa17.24■□□□□ 0.35
LIME1-203ENST00000465591 ZNF137PP52743 207 aa17.24■□□□□ 0.35
LIME1-203ENST00000465591 TMEM30BQ3MIR4 351 aa17.24■□□□□ 0.35
LIME1-203ENST00000465591 MORN2Q502X0 79 aa17.24■□□□□ 0.35
LIME1-203ENST00000465591 OR4F17Q8NGA8 305 aa17.24■□□□□ 0.35
LIME1-203ENST00000465591 OR6M1Q8NGM8 313 aa17.24■□□□□ 0.35
LIME1-203ENST00000465591 NOL4LQ96MY1 436 aaPredicted RBP17.24■□□□□ 0.35
LIME1-203ENST00000465591 NEDD4LQ96PU5 975 aa17.24■□□□□ 0.35
LIME1-203ENST00000465591 OR4F4Q96R69 305 aa17.24■□□□□ 0.35
LIME1-203ENST00000465591 LPAR5Q9H1C0 372 aa17.24■□□□□ 0.35
LIME1-203ENST00000465591 OR2S2Q9NQN1 319 aa17.24■□□□□ 0.35
LIME1-203ENST00000465591 TCRBV4S1A1TA0A5B7 111 aa17.23■□□□□ 0.35
LIME1-203ENST00000465591 LINC01548A6NM66 108 aa17.23■□□□□ 0.35
LIME1-203ENST00000465591 BPNT1O95861 308 aa17.23■□□□□ 0.35
LIME1-203ENST00000465591 IL3RAP26951 378 aa17.23■□□□□ 0.35
LIME1-203ENST00000465591 PPP1CCP36873 323 aaKnown RBP17.23■□□□□ 0.35
LIME1-203ENST00000465591 SSX1Q16384 188 aa17.23■□□□□ 0.35
LIME1-203ENST00000465591 RAB9BQ9NP90 201 aa17.23■□□□□ 0.35
LIME1-203ENST00000465591 LINC00527Q9UJ94 153 aa17.23■□□□□ 0.35
LIME1-203ENST00000465591 SLC17A2O00624 439 aa17.22■□□□□ 0.35
LIME1-203ENST00000465591 SOCS1O15524 211 aa17.22■□□□□ 0.35
LIME1-203ENST00000465591 CLDN12P56749 244 aa17.22■□□□□ 0.35
LIME1-203ENST00000465591 TRAM1Q15629 374 aa17.22■□□□□ 0.35
LIME1-203ENST00000465591 HMGN3Q15651 99 aa17.22■□□□□ 0.35
LIME1-203ENST00000465591 TBCEQ15813 527 aaPredicted RBP17.22■□□□□ 0.35
LIME1-203ENST00000465591 OXLD1Q5BKU9 147 aa17.22■□□□□ 0.35
LIME1-203ENST00000465591 ZNF554Q86TJ5 538 aa17.22■□□□□ 0.35
LIME1-203ENST00000465591 ZNF329Q86UD4 541 aa17.22■□□□□ 0.35
LIME1-203ENST00000465591 SVOPQ8N4V2 548 aa17.22■□□□□ 0.35
LIME1-203ENST00000465591 PLSCR3Q9NRY6 295 aa17.22■□□□□ 0.35
LIME1-203ENST00000465591 KCNIP1Q9NZI2 227 aa17.22■□□□□ 0.35
LIME1-203ENST00000465591 NAPSAO96009 420 aa17.21■□□□□ 0.35
LIME1-203ENST00000465591 PSMA1P25786 263 aaKnown RBP17.21■□□□□ 0.35
LIME1-203ENST00000465591 CALRP27797 417 aaKnown RBP17.21■□□□□ 0.35
LIME1-203ENST00000465591 CD1BP29016 333 aa17.21■□□□□ 0.35
LIME1-203ENST00000465591 BLVRBP30043 206 aaPredicted RBP17.21■□□□□ 0.35
LIME1-203ENST00000465591 KPRPQ5T749 579 aaPredicted RBP17.21■□□□□ 0.35
LIME1-203ENST00000465591 TGIF2LXQ8IUE1 241 aa17.21■□□□□ 0.35
LIME1-203ENST00000465591 ODF3L1Q8IXM7 274 aa17.21■□□□□ 0.35
LIME1-203ENST00000465591 Q8N9W7 124 aa17.21■□□□□ 0.35
LIME1-203ENST00000465591 OR2T10Q8NGZ9 312 aa17.21■□□□□ 0.35
LIME1-203ENST00000465591 HDHD3Q9BSH5 251 aaPredicted RBP17.21■□□□□ 0.35
LIME1-203ENST00000465591 PLGRKTQ9HBL7 147 aa17.21■□□□□ 0.35
LIME1-203ENST00000465591 JPT1Q9UK76 154 aa17.21■□□□□ 0.35
LIME1-203ENST00000465591 TSSC4Q9Y5U2 329 aaPredicted RBP17.21■□□□□ 0.35
LIME1-203ENST00000465591 DNAH3Q8TD57 4116 aa17.21■□□□□ 0.35
LIME1-203ENST00000465591 SHISA3A0PJX4 238 aa17.2■□□□□ 0.34
LIME1-203ENST00000465591 PSMB11A5LHX3 300 aa17.2■□□□□ 0.34
LIME1-203ENST00000465591 FOXI3A8MTJ6 420 aaPredicted RBP17.2■□□□□ 0.34
LIME1-203ENST00000465591 ARL6IP5O75915 188 aa17.2■□□□□ 0.34
LIME1-203ENST00000465591 IGHG2P01859 326 aa17.2■□□□□ 0.34
LIME1-203ENST00000465591 PRB2P02812 416 aaPredicted RBP17.2■□□□□ 0.34
LIME1-203ENST00000465591 HTD2P86397 168 aa17.2■□□□□ 0.34
LIME1-203ENST00000465591 PLA2G7Q13093 441 aa17.2■□□□□ 0.34
LIME1-203ENST00000465591 STEAP3Q658P3 488 aa17.2■□□□□ 0.34
LIME1-203ENST00000465591 ZNF880Q6PDB4 577 aa17.2■□□□□ 0.34
LIME1-203ENST00000465591 OR51D1Q8NGF3 324 aa17.2■□□□□ 0.34
LIME1-203ENST00000465591 OR4X2Q8NGF9 303 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms