RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 M0QYG6 137 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 SULT2B1O00204 365 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 PLPP1O14494 284 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 HIST1H2BKO60814 126 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 LDB3O75112 727 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 SIX6O95475 246 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 OXTP01178 125 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 VTNP04004 478 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 IGF1P05019 195 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 HIST1H2BJP06899 126 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 FAM106CPP0CH98 169 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 CT45A10P0DMU9 189 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 LAMP1P11279 417 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 ERGP11308 486 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 GNB3P16520 340 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 RPL35AP18077 110 aaKnown RBP3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 RPL7P18124 248 aaKnown RBP3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 HIST1H2BOP23527 126 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 PRPH2P23942 346 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 MPGP29372 298 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 HIST1H2BBP33778 126 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 G6PCP35575 357 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 NOVP48745 357 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 POLR2HP52434 150 aaKnown RBP3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 HIST1H2BDP58876 126 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 HILS1P60008 231 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 LCN6P62502 163 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 HIST1H2BCP62807 126 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 GRB2P62993 217 aaKnown RBP3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 PSG9Q00887 426 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 CRYZQ08257 329 aaKnown RBP3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 SLC10A2Q12908 348 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 VGLL4Q14135 290 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 EXOSC7Q15024 291 aaKnown RBP3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 HIST2H2BEQ16778 126 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 ACOT6Q3I5F7 207 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 TIMM50Q3ZCQ8 353 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 ACSF3Q4G176 576 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 FAM106AQ4KMX7 169 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 GLYATL3Q5SZD4 288 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 TREML2Q5T2D2 321 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 ZNF660Q6AZW8 331 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 SLC18B1Q6NT16 456 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 MFSD12Q6NUT3 480 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 UFSP1Q6NVU6 142 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 CDC42EP5Q6NZY7 148 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 C12orf54Q6X4T0 127 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 TEX43Q6ZNM6 134 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 MOB1BQ7L9L4 216 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 C16orf82Q7Z2V1 217 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 OR4N5Q8IXE1 308 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 FAM71E2Q8N5Q1 922 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 ZNF433Q8N7K0 673 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 OR2A12Q8NGT7 310 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 OR4L1Q8NH43 312 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 TMEM171Q8WVE6 324 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 NDRG1Q92597 394 aaKnown RBP3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 HIST1H2BHQ93079 126 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 SARAFQ96BY9 339 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 DERL3Q96Q80 235 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 NKX3-1Q99801 234 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 HIST1H2BNQ99877 126 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 HIST1H2BMQ99879 126 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 FGFBP2Q9BYJ0 223 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 ELL3Q9HB65 397 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 APOBEC3GQ9HC16 384 aaKnown RBP3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 HES4Q9HCC6 221 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 SH2D2AQ9NP31 389 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 SIX2Q9NPC8 291 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 ACP6Q9NPH0 428 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 EXOSC3Q9NQT5 275 aaKnown RBP3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 ANXA10Q9UJ72 324 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 CYSLTR1Q9Y271 337 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 BTRCQ9Y297 605 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 ENPP4Q9Y6X5 453 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 COL5A3P25940 1745 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 DDX60LQ5H9U9 1706 aaKnown RBP3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 TTC28Q96AY4 2481 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 ZNF831Q5JPB2 1677 aa3.97□□□□□ -1.77
HMGB3P9-201ENST00000441799 PLXND1Q9Y4D7 1925 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 C9JAW5 83 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 H0YL77 283 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 CDC42EP2O14613 210 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 PLA2G10O15496 165 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 MLNRO43193 412 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 DHRS3O75911 302 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 CDRT1O95170 752 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 SOX14O95416 240 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 GPANK1O95872 356 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 HLA-DQB2P05538 268 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 OR4A8P0C604 315 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 AKAIN1P0CW23 69 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 CT45A8P0DMV1 189 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 CT45A9P0DMV2 189 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 HIST1H1DP16402 221 aaKnown RBP3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 PGCP20142 388 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 NFYBP25208 207 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 GPM6AP51674 278 aa3.96□□□□□ -1.78
HMGB3P9-201ENST00000441799 EMP1P54849 157 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms