RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 FAAP24Q9BTP7 215 aa14.06□□□□□ -0.16
LSM5-204ENST00000409909 TAF9BQ9HBM6 251 aa14.06□□□□□ -0.16
LSM5-204ENST00000409909 TMEM14DPA8MWL7 114 aa14.05□□□□□ -0.16
LSM5-204ENST00000409909 FABP5Q01469 135 aa14.05□□□□□ -0.16
LSM5-204ENST00000409909 EBI3Q14213 229 aa14.05□□□□□ -0.16
LSM5-204ENST00000409909 Q3ZCU0 254 aa14.05□□□□□ -0.16
LSM5-204ENST00000409909 TRAT1Q6PIZ9 186 aa14.05□□□□□ -0.16
LSM5-204ENST00000409909 C6orf201Q7Z4U5 140 aa14.05□□□□□ -0.16
LSM5-204ENST00000409909 C5orf56Q8N8D9 126 aa14.05□□□□□ -0.16
LSM5-204ENST00000409909 KCNG3Q8TAE7 436 aa14.05□□□□□ -0.16
LSM5-204ENST00000409909 RTN4IP1Q8WWV3 396 aaPredicted RBP14.05□□□□□ -0.16
LSM5-204ENST00000409909 RBMXL1Q96E39 390 aaKnown RBP14.05□□□□□ -0.16
LSM5-204ENST00000409909 TMEM59Q9BXS4 323 aa14.05□□□□□ -0.16
LSM5-204ENST00000409909 GNG12Q9UBI6 72 aa14.05□□□□□ -0.16
LSM5-204ENST00000409909 A0A0A6YYD4 124 aa14.04□□□□□ -0.16
LSM5-204ENST00000409909 A0A1W2PRX2 142 aa14.04□□□□□ -0.16
LSM5-204ENST00000409909 G3V4G9 280 aa14.04□□□□□ -0.16
LSM5-204ENST00000409909 GNMTQ14749 295 aa14.04□□□□□ -0.16
LSM5-204ENST00000409909 P2RY14Q15391 338 aa14.04□□□□□ -0.16
LSM5-204ENST00000409909 TRAM1Q15629 374 aa14.04□□□□□ -0.16
LSM5-204ENST00000409909 TMEM30BQ3MIR4 351 aa14.04□□□□□ -0.16
LSM5-204ENST00000409909 Q6ZPA2 131 aa14.04□□□□□ -0.16
LSM5-204ENST00000409909 OR6M1Q8NGM8 313 aa14.04□□□□□ -0.16
LSM5-204ENST00000409909 R3HDM4Q96D70 268 aa14.04□□□□□ -0.16
LSM5-204ENST00000409909 EAF1Q96JC9 268 aaPredicted RBP14.04□□□□□ -0.16
LSM5-204ENST00000409909 NEDD4LQ96PU5 975 aa14.04□□□□□ -0.16
LSM5-204ENST00000409909 TM2D1Q9BX74 207 aa14.04□□□□□ -0.16
LSM5-204ENST00000409909 RAB9BQ9NP90 201 aa14.04□□□□□ -0.16
LSM5-204ENST00000409909 AK6Q9Y3D8 172 aaKnown RBP14.04□□□□□ -0.16
LSM5-204ENST00000409909 ZNF736B4DX44 427 aaPredicted RBP14.03□□□□□ -0.16
LSM5-204ENST00000409909 ATP6V1G2O95670 118 aa14.03□□□□□ -0.16
LSM5-204ENST00000409909 BPNT1O95861 308 aa14.03□□□□□ -0.16
LSM5-204ENST00000409909 ZNF137PP52743 207 aa14.03□□□□□ -0.16
LSM5-204ENST00000409909 MORN2Q502X0 79 aa14.03□□□□□ -0.16
LSM5-204ENST00000409909 IZUMO1Q8IYV9 350 aa14.03□□□□□ -0.16
LSM5-204ENST00000409909 Q8N6K4 173 aa14.03□□□□□ -0.16
LSM5-204ENST00000409909 OR52L2PQ8NGH6 319 aa14.03□□□□□ -0.16
LSM5-204ENST00000409909 OR2S2Q9NQN1 319 aa14.03□□□□□ -0.16
LSM5-204ENST00000409909 KCNIP1Q9NZI2 227 aa14.03□□□□□ -0.16
LSM5-204ENST00000409909 RAB26Q9ULW5 256 aa14.03□□□□□ -0.16
LSM5-204ENST00000409909 SLC17A2O00624 439 aa14.02□□□□□ -0.17
LSM5-204ENST00000409909 FGF16O43320 207 aa14.02□□□□□ -0.17
LSM5-204ENST00000409909 ARL6IP5O75915 188 aa14.02□□□□□ -0.17
LSM5-204ENST00000409909 PSMA1P25786 263 aaKnown RBP14.02□□□□□ -0.17
LSM5-204ENST00000409909 IL3RAP26951 378 aa14.02□□□□□ -0.17
LSM5-204ENST00000409909 CALRP27797 417 aaKnown RBP14.02□□□□□ -0.17
LSM5-204ENST00000409909 BLVRBP30043 206 aaPredicted RBP14.02□□□□□ -0.17
LSM5-204ENST00000409909 PPP1CCP36873 323 aaKnown RBP14.02□□□□□ -0.17
LSM5-204ENST00000409909 TBCEQ15813 527 aaPredicted RBP14.02□□□□□ -0.17
LSM5-204ENST00000409909 SSX1Q16384 188 aa14.02□□□□□ -0.17
LSM5-204ENST00000409909 ZNF554Q86TJ5 538 aa14.02□□□□□ -0.17
LSM5-204ENST00000409909 OR4F17Q8NGA8 305 aa14.02□□□□□ -0.17
LSM5-204ENST00000409909 OR4F4Q96R69 305 aa14.02□□□□□ -0.17
LSM5-204ENST00000409909 LPAR5Q9H1C0 372 aa14.02□□□□□ -0.17
LSM5-204ENST00000409909 PLSCR3Q9NRY6 295 aa14.02□□□□□ -0.17
LSM5-204ENST00000409909 TCRBV4S1A1TA0A5B7 111 aa14.01□□□□□ -0.17
LSM5-204ENST00000409909 LINC01548A6NM66 108 aa14.01□□□□□ -0.17
LSM5-204ENST00000409909 SOCS1O15524 211 aa14.01□□□□□ -0.17
LSM5-204ENST00000409909 NAPSAO96009 420 aa14.01□□□□□ -0.17
LSM5-204ENST00000409909 ARSBP15848 533 aa14.01□□□□□ -0.17
LSM5-204ENST00000409909 CD1BP29016 333 aa14.01□□□□□ -0.17
LSM5-204ENST00000409909 HTD2P86397 168 aa14.01□□□□□ -0.17
LSM5-204ENST00000409909 BEAN1Q3B7T3 259 aa14.01□□□□□ -0.17
LSM5-204ENST00000409909 SAMD5Q5TGI4 173 aa14.01□□□□□ -0.17
LSM5-204ENST00000409909 STEAP3Q658P3 488 aa14.01□□□□□ -0.17
LSM5-204ENST00000409909 TGIF2LXQ8IUE1 241 aa14.01□□□□□ -0.17
LSM5-204ENST00000409909 FAM89BQ8N5H3 189 aa14.01□□□□□ -0.17
LSM5-204ENST00000409909 OR2T10Q8NGZ9 312 aa14.01□□□□□ -0.17
LSM5-204ENST00000409909 NOL4LQ96MY1 436 aaPredicted RBP14.01□□□□□ -0.17
LSM5-204ENST00000409909 PLGRKTQ9HBL7 147 aa14.01□□□□□ -0.17
LSM5-204ENST00000409909 ACOT13Q9NPJ3 140 aa14.01□□□□□ -0.17
LSM5-204ENST00000409909 NCBP2LA6PVI3 153 aaKnown RBP14□□□□□ -0.17
LSM5-204ENST00000409909 CLDN12P56749 244 aa14□□□□□ -0.17
LSM5-204ENST00000409909 HMGN3Q15651 99 aa14□□□□□ -0.17
LSM5-204ENST00000409909 RAB11BQ15907 218 aa14□□□□□ -0.17
LSM5-204ENST00000409909 ZNF880Q6PDB4 577 aa14□□□□□ -0.17
LSM5-204ENST00000409909 ZNF367Q7RTV3 350 aa14□□□□□ -0.17
LSM5-204ENST00000409909 OR2W3Q7Z3T1 314 aa14□□□□□ -0.17
LSM5-204ENST00000409909 ZNF329Q86UD4 541 aa14□□□□□ -0.17
LSM5-204ENST00000409909 ODF3L1Q8IXM7 274 aa14□□□□□ -0.17
LSM5-204ENST00000409909 OR51D1Q8NGF3 324 aa14□□□□□ -0.17
LSM5-204ENST00000409909 PLEKHJ1Q9NW61 149 aa14□□□□□ -0.17
LSM5-204ENST00000409909 LINC00527Q9UJ94 153 aa14□□□□□ -0.17
LSM5-204ENST00000409909 JPT1Q9UK76 154 aa14□□□□□ -0.17
LSM5-204ENST00000409909 BLOC1S6Q9UL45 172 aa14□□□□□ -0.17
LSM5-204ENST00000409909 TSSC4Q9Y5U2 329 aaPredicted RBP14□□□□□ -0.17
LSM5-204ENST00000409909 DNAH3Q8TD57 4116 aa14□□□□□ -0.17
LSM5-204ENST00000409909 PSMB11A5LHX3 300 aa13.99□□□□□ -0.17
LSM5-204ENST00000409909 FOXI3A8MTJ6 420 aaPredicted RBP13.99□□□□□ -0.17
LSM5-204ENST00000409909 LANCL1O43813 399 aa13.99□□□□□ -0.17
LSM5-204ENST00000409909 MOSP00540 346 aa13.99□□□□□ -0.17
LSM5-204ENST00000409909 IGHG2P01859 326 aa13.99□□□□□ -0.17
LSM5-204ENST00000409909 TMEM50BP56557 158 aa13.99□□□□□ -0.17
LSM5-204ENST00000409909 KPRPQ5T749 579 aaPredicted RBP13.99□□□□□ -0.17
LSM5-204ENST00000409909 SVOPQ8N4V2 548 aa13.99□□□□□ -0.17
LSM5-204ENST00000409909 Q8N9W7 124 aa13.99□□□□□ -0.17
LSM5-204ENST00000409909 OR4X2Q8NGF9 303 aa13.99□□□□□ -0.17
LSM5-204ENST00000409909 GALMQ96C23 342 aa13.99□□□□□ -0.17
LSM5-204ENST00000409909 ABHD14AQ9BUJ0 271 aa13.99□□□□□ -0.17
LSM5-204ENST00000409909 LRRC42Q9Y546 428 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms