RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 GEMIN2O14893 280 aaKnown RBP12.72□□□□□ -0.37
CHMP3-203ENST00000409225 ARPC1BO15143 372 aaKnown RBP12.72□□□□□ -0.37
CHMP3-203ENST00000409225 SLC16A6O15403 523 aa12.72□□□□□ -0.37
CHMP3-203ENST00000409225 MAGEB3O15480 346 aa12.72□□□□□ -0.37
CHMP3-203ENST00000409225 RGS11O94810 467 aa12.72□□□□□ -0.37
CHMP3-203ENST00000409225 CDRT1O95170 752 aa12.72□□□□□ -0.37
CHMP3-203ENST00000409225 MT-ND4P03905 459 aa12.72□□□□□ -0.37
CHMP3-203ENST00000409225 ZNF19P17023 458 aa12.72□□□□□ -0.37
CHMP3-203ENST00000409225 CRIP2P52943 208 aaPredicted RBP12.72□□□□□ -0.37
CHMP3-203ENST00000409225 RBM11P57052 281 aaKnown RBP12.72□□□□□ -0.37
CHMP3-203ENST00000409225 ALKBH1Q13686 389 aaKnown RBP12.72□□□□□ -0.37
CHMP3-203ENST00000409225 RNLSQ5VYX0 342 aa12.72□□□□□ -0.37
CHMP3-203ENST00000409225 ZNF497Q6ZNH5 498 aa12.72□□□□□ -0.37
CHMP3-203ENST00000409225 TCTEX1D1Q8N7M0 179 aa12.72□□□□□ -0.37
CHMP3-203ENST00000409225 NPBQ8NG41 125 aa12.72□□□□□ -0.37
CHMP3-203ENST00000409225 OR52N1Q8NH53 320 aa12.72□□□□□ -0.37
CHMP3-203ENST00000409225 OR1L1Q8NH94 360 aa12.72□□□□□ -0.37
CHMP3-203ENST00000409225 RHOVQ96L33 236 aa12.72□□□□□ -0.37
CHMP3-203ENST00000409225 ING4Q9UNL4 249 aa12.72□□□□□ -0.37
CHMP3-203ENST00000409225 HBZP02008 142 aa12.71□□□□□ -0.37
CHMP3-203ENST00000409225 RAB3AP20336 220 aa12.71□□□□□ -0.37
CHMP3-203ENST00000409225 CX3CL1P78423 397 aa12.71□□□□□ -0.37
CHMP3-203ENST00000409225 TMED1Q13445 227 aa12.71□□□□□ -0.37
CHMP3-203ENST00000409225 ACTBL2Q562R1 376 aa12.71□□□□□ -0.37
CHMP3-203ENST00000409225 ZNF660Q6AZW8 331 aaPredicted RBP12.71□□□□□ -0.37
CHMP3-203ENST00000409225 PYHIN1Q6K0P9 492 aa12.71□□□□□ -0.37
CHMP3-203ENST00000409225 STX19Q8N4C7 294 aa12.71□□□□□ -0.37
CHMP3-203ENST00000409225 PARP16Q8N5Y8 322 aa12.71□□□□□ -0.37
CHMP3-203ENST00000409225 OR51A2Q8NGJ7 313 aa12.71□□□□□ -0.37
CHMP3-203ENST00000409225 TSEN15Q8WW01 171 aaKnown RBP12.71□□□□□ -0.37
CHMP3-203ENST00000409225 RFKQ969G6 155 aa12.71□□□□□ -0.37
CHMP3-203ENST00000409225 PELI1Q96FA3 418 aa12.71□□□□□ -0.37
CHMP3-203ENST00000409225 NABP2Q9BQ15 211 aa12.71□□□□□ -0.37
CHMP3-203ENST00000409225 THAP7Q9BT49 309 aaPredicted RBP12.71□□□□□ -0.37
CHMP3-203ENST00000409225 THTPAQ9BU02 230 aa12.71□□□□□ -0.37
CHMP3-203ENST00000409225 FBXL15Q9H469 300 aa12.71□□□□□ -0.37
CHMP3-203ENST00000409225 PLEKHA3Q9HB20 300 aa12.71□□□□□ -0.37
CHMP3-203ENST00000409225 TRAPPC2LQ9UL33 140 aa12.71□□□□□ -0.37
CHMP3-203ENST00000409225 DHDHQ9UQ10 334 aa12.71□□□□□ -0.37
CHMP3-203ENST00000409225 NUBP2Q9Y5Y2 271 aa12.71□□□□□ -0.37
CHMP3-203ENST00000409225 NDUFA3O95167 84 aa12.7□□□□□ -0.38
CHMP3-203ENST00000409225 BRI3O95415 125 aa12.7□□□□□ -0.38
CHMP3-203ENST00000409225 EGR2P11161 476 aaPredicted RBP12.7□□□□□ -0.38
CHMP3-203ENST00000409225 TMEM267Q0VDI3 215 aaPredicted RBP12.7□□□□□ -0.38
CHMP3-203ENST00000409225 PLGLAQ15195 96 aa12.7□□□□□ -0.38
CHMP3-203ENST00000409225 NHLRC3Q5JS37 347 aa12.7□□□□□ -0.38
CHMP3-203ENST00000409225 SYT6Q5T7P8 510 aaPredicted RBP12.7□□□□□ -0.38
CHMP3-203ENST00000409225 KDM4DQ6B0I6 523 aa12.7□□□□□ -0.38
CHMP3-203ENST00000409225 UNQ5815/PRO19632Q6UWF5 114 aa12.7□□□□□ -0.38
CHMP3-203ENST00000409225 ASCL4Q6XD76 172 aa12.7□□□□□ -0.38
CHMP3-203ENST00000409225 PPP1R27Q86WC6 154 aa12.7□□□□□ -0.38
CHMP3-203ENST00000409225 OR4K15Q8NH41 348 aa12.7□□□□□ -0.38
CHMP3-203ENST00000409225 C4orf36Q96KX1 117 aa12.7□□□□□ -0.38
CHMP3-203ENST00000409225 FAM103A1Q9BTL3 118 aaKnown RBP12.7□□□□□ -0.38
CHMP3-203ENST00000409225 METTL9Q9H1A3 318 aa12.7□□□□□ -0.38
CHMP3-203ENST00000409225 RAB9BQ9NP90 201 aa12.7□□□□□ -0.38
CHMP3-203ENST00000409225 MED4Q9NPJ6 270 aa12.7□□□□□ -0.38
CHMP3-203ENST00000409225 CNOT2Q9NZN8 540 aaKnown RBP12.7□□□□□ -0.38
CHMP3-203ENST00000409225 SHISA3A0PJX4 238 aa12.69□□□□□ -0.38
CHMP3-203ENST00000409225 SERPINA2P20848 420 aa12.69□□□□□ -0.38
CHMP3-203ENST00000409225 ZP3P21754 424 aa12.69□□□□□ -0.38
CHMP3-203ENST00000409225 POLR2IP36954 125 aaKnown RBP12.69□□□□□ -0.38
CHMP3-203ENST00000409225 ADARB1P78563 741 aaKnown RBP12.69□□□□□ -0.38
CHMP3-203ENST00000409225 FLOT2Q14254 428 aa12.69□□□□□ -0.38
CHMP3-203ENST00000409225 GNMTQ14749 295 aa12.69□□□□□ -0.38
CHMP3-203ENST00000409225 TMEM30BQ3MIR4 351 aa12.69□□□□□ -0.38
CHMP3-203ENST00000409225 C6orf183Q5T699 404 aa12.69□□□□□ -0.38
CHMP3-203ENST00000409225 IL34Q6ZMJ4 242 aa12.69□□□□□ -0.38
CHMP3-203ENST00000409225 OR8J1Q8NGP2 316 aa12.69□□□□□ -0.38
CHMP3-203ENST00000409225 OR9G4Q8NGQ1 327 aa12.69□□□□□ -0.38
CHMP3-203ENST00000409225 ABHD14AQ9BUJ0 271 aa12.69□□□□□ -0.38
CHMP3-203ENST00000409225 RANGRFQ9HD47 186 aaPredicted RBP12.69□□□□□ -0.38
CHMP3-203ENST00000409225 TAS2R4Q9NYW5 299 aa12.69□□□□□ -0.38
CHMP3-203ENST00000409225 GAB2Q9UQC2 676 aa12.69□□□□□ -0.38
CHMP3-203ENST00000409225 TCRBV3S1A0A5B6 114 aa12.68□□□□□ -0.38
CHMP3-203ENST00000409225 ANKRD34BA5PLL1 514 aa12.68□□□□□ -0.38
CHMP3-203ENST00000409225 IZUMO1RA6ND01 250 aa12.68□□□□□ -0.38
CHMP3-203ENST00000409225 FCN1O00602 326 aa12.68□□□□□ -0.38
CHMP3-203ENST00000409225 TRGV3P03979 118 aa12.68□□□□□ -0.38
CHMP3-203ENST00000409225 FSTP19883 344 aa12.68□□□□□ -0.38
CHMP3-203ENST00000409225 CALB2P22676 271 aa12.68□□□□□ -0.38
CHMP3-203ENST00000409225 CD40LGP29965 261 aa12.68□□□□□ -0.38
CHMP3-203ENST00000409225 OR3A3P47888 321 aa12.68□□□□□ -0.38
CHMP3-203ENST00000409225 MORN2Q502X0 79 aa12.68□□□□□ -0.38
CHMP3-203ENST00000409225 STEAP3Q658P3 488 aa12.68□□□□□ -0.38
CHMP3-203ENST00000409225 LCN12Q6JVE5 192 aa12.68□□□□□ -0.38
CHMP3-203ENST00000409225 CD200R1LQ6Q8B3 271 aa12.68□□□□□ -0.38
CHMP3-203ENST00000409225 LINC00322Q6ZN03 302 aaPredicted RBP12.68□□□□□ -0.38
CHMP3-203ENST00000409225 LINC00596Q86U02 117 aa12.68□□□□□ -0.38
CHMP3-203ENST00000409225 ODF3L1Q8IXM7 274 aa12.68□□□□□ -0.38
CHMP3-203ENST00000409225 RDH12Q96NR8 316 aa12.68□□□□□ -0.38
CHMP3-203ENST00000409225 RIBC2Q9H4K1 309 aa12.68□□□□□ -0.38
CHMP3-203ENST00000409225 OR2S2Q9NQN1 319 aa12.68□□□□□ -0.38
CHMP3-203ENST00000409225 ETAA1Q9NY74 926 aa12.68□□□□□ -0.38
CHMP3-203ENST00000409225 IL36GQ9NZH8 169 aa12.68□□□□□ -0.38
CHMP3-203ENST00000409225 RNF150Q9ULK6 438 aa12.68□□□□□ -0.38
CHMP3-203ENST00000409225 G3V2T6 193 aa12.67□□□□□ -0.38
CHMP3-203ENST00000409225 J3QRE1 110 aa12.67□□□□□ -0.38
CHMP3-203ENST00000409225 RRHO14718 337 aa12.67□□□□□ -0.38
CHMP3-203ENST00000409225 T-ENOLP0DO92 83 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms