RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 ASPMQ8IZT6 3477 aa20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 IFNL4K9M1U5 179 aa20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 UCP1P25874 307 aa20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 CCKARP32238 428 aa20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 FAM3BP58499 235 aaPredicted RBP20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 HERPUD1Q15011 391 aa20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 DAZAP2Q15038 168 aaPredicted RBP20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 WFIKKN1Q96NZ8 548 aa20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 KIAA1549Q9HCM3 1950 aa20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 B4E171 279 aa20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 ZNF737O75373 536 aa20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 LIFP15018 202 aa20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 TSPAN7P41732 249 aa20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 ELLP55199 621 aaPredicted RBP20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 RTP5Q14D33 572 aa20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 CYP2G1PQ6ZSU1 146 aa20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 EXTL1Q92935 676 aa20.51■□□□□ 0.87
CSNK1E-203ENST00000396832 DUXBA0A1W2PPF3 345 aa20.5■□□□□ 0.87
CSNK1E-203ENST00000396832 CEACAM16Q2WEN9 425 aa20.5■□□□□ 0.87
CSNK1E-203ENST00000396832 RPUSD4Q96CM3 377 aaKnown RBP20.5■□□□□ 0.87
CSNK1E-203ENST00000396832 PROK2Q9HC23 129 aa20.5■□□□□ 0.87
CSNK1E-203ENST00000396832 CCL28Q9NRJ3 127 aa20.5■□□□□ 0.87
CSNK1E-203ENST00000396832 RPL23P62829 140 aaKnown RBP20.5■□□□□ 0.87
CSNK1E-203ENST00000396832 PCOLCEQ15113 449 aa20.5■□□□□ 0.87
CSNK1E-203ENST00000396832 C21orf62-AS1Q17RA5 79 aa20.5■□□□□ 0.87
CSNK1E-203ENST00000396832 ZNF295-AS1Q8N0V1 137 aa20.5■□□□□ 0.87
CSNK1E-203ENST00000396832 CADM4Q8NFZ8 388 aa20.5■□□□□ 0.87
CSNK1E-203ENST00000396832 OR51H1Q8NH63 302 aa20.5■□□□□ 0.87
CSNK1E-203ENST00000396832 C19orf25Q9UFG5 118 aaPredicted RBP20.5■□□□□ 0.87
CSNK1E-203ENST00000396832 LOC102725191A0A1B0GVB3 256 aa20.49■□□□□ 0.87
CSNK1E-203ENST00000396832 IFNA1P01562 189 aa20.49■□□□□ 0.87
CSNK1E-203ENST00000396832 BCL3P20749 454 aa20.49■□□□□ 0.87
CSNK1E-203ENST00000396832 MDH2P40926 338 aaKnown RBP20.49■□□□□ 0.87
CSNK1E-203ENST00000396832 C1orf194Q5T5A4 169 aa20.49■□□□□ 0.87
CSNK1E-203ENST00000396832 FKBP11Q9NYL4 201 aa20.49■□□□□ 0.87
CSNK1E-203ENST00000396832 IL17BQ9UHF5 180 aa20.49■□□□□ 0.87
CSNK1E-203ENST00000396832 R4GN57 208 aa20.49■□□□□ 0.87
CSNK1E-203ENST00000396832 ACTL10Q5JWF8 245 aa20.49■□□□□ 0.87
CSNK1E-203ENST00000396832 AGMATQ9BSE5 352 aa20.49■□□□□ 0.87
CSNK1E-203ENST00000396832 TMEM208Q9BTX3 173 aa20.49■□□□□ 0.87
CSNK1E-203ENST00000396832 DNAJC13O75165 2243 aa20.48■□□□□ 0.87
CSNK1E-203ENST00000396832 A0A0G2JRQ6 117 aa20.48■□□□□ 0.87
CSNK1E-203ENST00000396832 MAP1LC3B2A6NCE7 125 aa20.48■□□□□ 0.87
CSNK1E-203ENST00000396832 LRRC3CA6NJW4 275 aa20.48■□□□□ 0.87
CSNK1E-203ENST00000396832 CXCL13O43927 109 aa20.48■□□□□ 0.87
CSNK1E-203ENST00000396832 METTL15P1P0C7V9 234 aa20.48■□□□□ 0.87
CSNK1E-203ENST00000396832 IGFBP7Q16270 282 aa20.48■□□□□ 0.87
CSNK1E-203ENST00000396832 UBALD1Q8TB05 177 aa20.48■□□□□ 0.87
CSNK1E-203ENST00000396832 ZNF845Q96IR2 970 aaPredicted RBP20.48■□□□□ 0.87
CSNK1E-203ENST00000396832 MAP1LC3BQ9GZQ8 125 aa20.48■□□□□ 0.87
CSNK1E-203ENST00000396832 RNF150Q9ULK6 438 aa20.48■□□□□ 0.87
CSNK1E-203ENST00000396832 EDN3P14138 238 aa20.48■□□□□ 0.87
CSNK1E-203ENST00000396832 CENPVQ7Z7K6 275 aaPredicted RBP20.48■□□□□ 0.87
CSNK1E-203ENST00000396832 PLK3Q9H4B4 646 aa20.48■□□□□ 0.87
CSNK1E-203ENST00000396832 TMEM38BQ9NVV0 291 aa20.48■□□□□ 0.87
CSNK1E-203ENST00000396832 POLR3KQ9Y2Y1 108 aaPredicted RBP20.48■□□□□ 0.87
CSNK1E-203ENST00000396832 GOLT1BQ9Y3E0 138 aa20.48■□□□□ 0.87
CSNK1E-203ENST00000396832 AHCTF1Q8WYP5 2266 aa20.48■□□□□ 0.87
CSNK1E-203ENST00000396832 SLC22A20A6NK97 555 aa20.47■□□□□ 0.87
CSNK1E-203ENST00000396832 KBTBD11O94819 623 aa20.47■□□□□ 0.87
CSNK1E-203ENST00000396832 HRASP01112 189 aa20.47■□□□□ 0.87
CSNK1E-203ENST00000396832 CST2P09228 141 aa20.47■□□□□ 0.87
CSNK1E-203ENST00000396832 SRFP11831 508 aa20.47■□□□□ 0.87
CSNK1E-203ENST00000396832 DCAF10Q5QP82 559 aa20.47■□□□□ 0.87
CSNK1E-203ENST00000396832 TMEM210A6NLX4 147 aa20.47■□□□□ 0.87
CSNK1E-203ENST00000396832 GPM6AP51674 278 aa20.47■□□□□ 0.87
CSNK1E-203ENST00000396832 BTNL3Q6UXE8 466 aa20.47■□□□□ 0.87
CSNK1E-203ENST00000396832 FOXL2NBQ6ZUU3 175 aa20.47■□□□□ 0.87
CSNK1E-203ENST00000396832 GBGT1Q8N5D6 347 aa20.47■□□□□ 0.87
CSNK1E-203ENST00000396832 A0A096LPE4 126 aa20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 hCG_38984A0A1B0GV85 526 aa20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 A0A1W2PPZ6 126 aa20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 DLEU1O43261 78 aa20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 RPL29P47914 159 aaKnown RBP20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 ARL16Q0P5N6 197 aa20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 ACOT6Q3I5F7 207 aaPredicted RBP20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 WNT5BQ9H1J7 359 aa20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 CBY1Q9Y3M2 126 aa20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 TRAV39A0A0B4J263 110 aa20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 TRAPPC6AO75865 159 aa20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 DSCR4P56555 118 aaPredicted RBP20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 MEF2BQ02080 365 aaPredicted RBP20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 AAED1Q7RTV5 226 aa20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 OR5D13Q8NGL4 314 aa20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 ABHD3Q8WU67 409 aa20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 GPR146Q96CH1 333 aa20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 ZNF488Q96MN9 340 aa20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 FOXB1Q99853 325 aa20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 PSMG3Q9BT73 122 aaPredicted RBP20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 DOCK11Q5JSL3 2073 aa20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 PRR18Q8N4B5 295 aa20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 OR2T10Q8NGZ9 312 aa20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 LHX4Q969G2 390 aa20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 OR51B6Q9H340 312 aa20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 OR51I2Q9H344 312 aa20.46■□□□□ 0.87
CSNK1E-203ENST00000396832 VAMP5O95183 116 aa20.45■□□□□ 0.86
CSNK1E-203ENST00000396832 ZNF525Q8N782 197 aa20.45■□□□□ 0.86
CSNK1E-203ENST00000396832 RAB40CQ96S21 281 aa20.45■□□□□ 0.86
CSNK1E-203ENST00000396832 OR6C3Q9NZP0 311 aa20.45■□□□□ 0.86
CSNK1E-203ENST00000396832 KIR2DL5BA0A0G2JN68 375 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms