RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 OR51I2Q9H344 312 aa13.84□□□□□ -0.19
PCDH1-203ENST00000394536 LYZL6O75951 148 aa13.84□□□□□ -0.19
PCDH1-203ENST00000394536 CD46P15529 392 aa13.84□□□□□ -0.19
PCDH1-203ENST00000394536 FOXG1P55316 489 aaPredicted RBP13.84□□□□□ -0.19
PCDH1-203ENST00000394536 KCNIP4Q6PIL6 250 aa13.84□□□□□ -0.19
PCDH1-203ENST00000394536 CT55Q8WUE5 264 aa13.84□□□□□ -0.19
PCDH1-203ENST00000394536 GALMQ96C23 342 aa13.84□□□□□ -0.19
PCDH1-203ENST00000394536 C18orf12Q96KH6 178 aa13.84□□□□□ -0.19
PCDH1-203ENST00000394536 PACRGQ96M98 296 aaPredicted RBP13.84□□□□□ -0.19
PCDH1-203ENST00000394536 G6PCP35575 357 aa13.83□□□□□ -0.19
PCDH1-203ENST00000394536 EIF3IQ13347 325 aaKnown RBP13.83□□□□□ -0.19
PCDH1-203ENST00000394536 CEACAM21Q3KPI0 293 aa13.83□□□□□ -0.19
PCDH1-203ENST00000394536 MRGPRDQ8TDS7 321 aa13.83□□□□□ -0.19
PCDH1-203ENST00000394536 Q8WTZ3 238 aa13.83□□□□□ -0.19
PCDH1-203ENST00000394536 FAM173AQ9BQD7 235 aa13.83□□□□□ -0.19
PCDH1-203ENST00000394536 ACTR3CQ9C0K3 210 aaPredicted RBP13.83□□□□□ -0.19
PCDH1-203ENST00000394536 GLRX2Q9NS18 164 aa13.83□□□□□ -0.19
PCDH1-203ENST00000394536 CLN8Q9UBY8 286 aa13.83□□□□□ -0.19
PCDH1-203ENST00000394536 ZNF320A2RRD8 509 aa13.83□□□□□ -0.2
PCDH1-203ENST00000394536 SRP19P09132 144 aaKnown RBP13.83□□□□□ -0.2
PCDH1-203ENST00000394536 COX5AP20674 150 aa13.83□□□□□ -0.2
PCDH1-203ENST00000394536 MDH2P40926 338 aaKnown RBP13.83□□□□□ -0.2
PCDH1-203ENST00000394536 SSX2Q16385 188 aa13.83□□□□□ -0.2
PCDH1-203ENST00000394536 BSXQ3C1V8 233 aa13.83□□□□□ -0.2
PCDH1-203ENST00000394536 PRAMEF5Q5TYX0 476 aa13.83□□□□□ -0.2
PCDH1-203ENST00000394536 PRAMEF6Q5VXH4 476 aa13.83□□□□□ -0.2
PCDH1-203ENST00000394536 TMEM171Q8WVE6 324 aa13.83□□□□□ -0.2
PCDH1-203ENST00000394536 IMMP1LQ96LU5 166 aa13.83□□□□□ -0.2
PCDH1-203ENST00000394536 OR4C12Q96R67 309 aa13.83□□□□□ -0.2
PCDH1-203ENST00000394536 MTCH1Q9NZJ7 389 aa13.83□□□□□ -0.2
PCDH1-203ENST00000394536 XKRY2A2RUG3 117 aa13.83□□□□□ -0.2
PCDH1-203ENST00000394536 CD63P08962 238 aa13.83□□□□□ -0.2
PCDH1-203ENST00000394536 BCL2P10415 239 aa13.83□□□□□ -0.2
PCDH1-203ENST00000394536 UCP3P55916 312 aa13.83□□□□□ -0.2
PCDH1-203ENST00000394536 ALKBH6Q3KRA9 238 aa13.83□□□□□ -0.2
PCDH1-203ENST00000394536 OR10G4Q8NGN3 311 aa13.83□□□□□ -0.2
PCDH1-203ENST00000394536 OR10G9Q8NGN4 311 aa13.83□□□□□ -0.2
PCDH1-203ENST00000394536 OR10G7Q8NGN6 311 aa13.83□□□□□ -0.2
PCDH1-203ENST00000394536 OR4A16Q8NH70 328 aa13.83□□□□□ -0.2
PCDH1-203ENST00000394536 LURAP1Q96LR2 239 aa13.83□□□□□ -0.2
PCDH1-203ENST00000394536 TAAR3PQ9P1P4 343 aa13.83□□□□□ -0.2
PCDH1-203ENST00000394536 PRSS50Q9UI38 385 aa13.83□□□□□ -0.2
PCDH1-203ENST00000394536 LTBP2Q14767 1821 aa13.82□□□□□ -0.2
PCDH1-203ENST00000394536 IGLV3-32A0A0A0MS00 114 aa13.82□□□□□ -0.2
PCDH1-203ENST00000394536 OR5H1A6NKK0 313 aa13.82□□□□□ -0.2
PCDH1-203ENST00000394536 KLRC4-KLRK1H3BQV0 150 aa13.82□□□□□ -0.2
PCDH1-203ENST00000394536 K7N7A8 449 aa13.82□□□□□ -0.2
PCDH1-203ENST00000394536 LYL1P12980 280 aa13.82□□□□□ -0.2
PCDH1-203ENST00000394536 PMELP40967 661 aa13.82□□□□□ -0.2
PCDH1-203ENST00000394536 GALR1P47211 349 aa13.82□□□□□ -0.2
PCDH1-203ENST00000394536 DTX1Q86Y01 620 aa13.82□□□□□ -0.2
PCDH1-203ENST00000394536 OR5A2Q8NGI9 324 aa13.82□□□□□ -0.2
PCDH1-203ENST00000394536 PLA2G2EQ9NZK7 142 aa13.82□□□□□ -0.2
PCDH1-203ENST00000394536 TINAGQ9UJW2 476 aa13.82□□□□□ -0.2
PCDH1-203ENST00000394536 TRGC1P0CF51 173 aa13.82□□□□□ -0.2
PCDH1-203ENST00000394536 FGF5P12034 268 aa13.82□□□□□ -0.2
PCDH1-203ENST00000394536 CEBPDP49716 269 aaPredicted RBP13.82□□□□□ -0.2
PCDH1-203ENST00000394536 HIST3H3Q16695 136 aa13.82□□□□□ -0.2
PCDH1-203ENST00000394536 PINX1Q96BK5 328 aaKnown RBP13.82□□□□□ -0.2
PCDH1-203ENST00000394536 TWSG1Q9GZX9 223 aa13.82□□□□□ -0.2
PCDH1-203ENST00000394536 SERTAD4Q9NUC0 356 aa13.82□□□□□ -0.2
PCDH1-203ENST00000394536 USF3Q68DE3 2245 aa13.82□□□□□ -0.2
PCDH1-203ENST00000394536 RHBDL1O75783 438 aa13.82□□□□□ -0.2
PCDH1-203ENST00000394536 CRYAAP02489 173 aa13.82□□□□□ -0.2
PCDH1-203ENST00000394536 HSPB1P04792 205 aaKnown RBP13.82□□□□□ -0.2
PCDH1-203ENST00000394536 HS3ST6Q96QI5 342 aa13.82□□□□□ -0.2
PCDH1-203ENST00000394536 A0A087X0M5 115 aa13.81□□□□□ -0.2
PCDH1-203ENST00000394536 A0A1B0GX30 115 aa13.81□□□□□ -0.2
PCDH1-203ENST00000394536 ARGFXA6NJG6 315 aa13.81□□□□□ -0.2
PCDH1-203ENST00000394536 OR8U8P0C7N1 319 aa13.81□□□□□ -0.2
PCDH1-203ENST00000394536 SLC25A6P12236 298 aa13.81□□□□□ -0.2
PCDH1-203ENST00000394536 CRYGSP22914 178 aa13.81□□□□□ -0.2
PCDH1-203ENST00000394536 CDX1P47902 265 aaPredicted RBP13.81□□□□□ -0.2
PCDH1-203ENST00000394536 GFI1BQ5VTD9 330 aa13.81□□□□□ -0.2
PCDH1-203ENST00000394536 VAX2Q9UIW0 290 aa13.81□□□□□ -0.2
PCDH1-203ENST00000394536 PSG11Q9UQ72 335 aa13.81□□□□□ -0.2
PCDH1-203ENST00000394536 SPTAN1Q13813 2472 aaKnown RBP13.81□□□□□ -0.2
PCDH1-203ENST00000394536 A0A1B0GU03 582 aa13.81□□□□□ -0.2
PCDH1-203ENST00000394536 TMPRSS7Q7RTY8 843 aa13.81□□□□□ -0.2
PCDH1-203ENST00000394536 SAMD10Q9BYL1 202 aa13.81□□□□□ -0.2
PCDH1-203ENST00000394536 TMEM9BQ9NQ34 198 aa13.81□□□□□ -0.2
PCDH1-203ENST00000394536 DLL3Q9NYJ7 618 aa13.81□□□□□ -0.2
PCDH1-203ENST00000394536 APC2O95996 2303 aa13.81□□□□□ -0.2
PCDH1-203ENST00000394536 C17orf112F2Z3M2 114 aa13.81□□□□□ -0.2
PCDH1-203ENST00000394536 MMP7P09237 267 aaPredicted RBP13.81□□□□□ -0.2
PCDH1-203ENST00000394536 POM121Q96HA1 1249 aa13.81□□□□□ -0.2
PCDH1-203ENST00000394536 OR2J1Q9GZK6 312 aa13.81□□□□□ -0.2
PCDH1-203ENST00000394536 PLEKHA3Q9HB20 300 aa13.81□□□□□ -0.2
PCDH1-203ENST00000394536 FOXD3Q9UJU5 478 aaPredicted RBP13.81□□□□□ -0.2
PCDH1-203ENST00000394536 H0Y980 276 aa13.8□□□□□ -0.2
PCDH1-203ENST00000394536 UBE2CO00762 179 aa13.8□□□□□ -0.2
PCDH1-203ENST00000394536 DNPH1O43598 174 aa13.8□□□□□ -0.2
PCDH1-203ENST00000394536 PAGE4O60829 102 aa13.8□□□□□ -0.2
PCDH1-203ENST00000394536 Q3ZCU0 254 aa13.8□□□□□ -0.2
PCDH1-203ENST00000394536 SPNS3Q6ZMD2 512 aa13.8□□□□□ -0.2
PCDH1-203ENST00000394536 LRP11Q86VZ4 500 aa13.8□□□□□ -0.2
PCDH1-203ENST00000394536 OR10A7Q8NGE5 316 aa13.8□□□□□ -0.2
PCDH1-203ENST00000394536 TMEM204Q9BSN7 226 aa13.8□□□□□ -0.2
PCDH1-203ENST00000394536 MDFIC2A0A1B0GVS7 189 aa13.8□□□□□ -0.2
PCDH1-203ENST00000394536 AESQ08117 197 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms