RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 AFDNP55196 1824 aaKnown RBP4.27□□□□□ -1.73
PCDH9-201ENST00000377861 HNF1AP20823 631 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 IGFBP4P22692 258 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 ZXDBP98169 803 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 IGKV1D-42A0A075B6H8 117 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.27□□□□□ -1.73
PCDH9-201ENST00000377861 ODF4Q2M2E3 257 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 WIPI1Q5MNZ9 446 aaPredicted RBP4.27□□□□□ -1.73
PCDH9-201ENST00000377861 SGMS2Q8NHU3 365 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 A8MUA0 341 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 ADAM20O43506 726 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 TMPRSS9Q7Z410 1059 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 PCGF1Q9BSM1 259 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 TRGV5A0A0B4J1U4 118 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 MKRN2OSH3BPM6 223 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 MOSPD3O75425 235 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 FAM157CP0CG43 387 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 TMPRSS7Q7RTY8 843 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 CACNG5Q9UF02 275 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 ATP5LO75964 103 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 LTBRP36941 435 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 CBLN3Q6UW01 205 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 DYRK2Q92630 601 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 ZFP92A6NM28 416 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 C1orf194Q5T5A4 169 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 LINC01545Q5VT33 79 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 R3HDM4Q96D70 268 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 CDC34P49427 236 aaPredicted RBP4.26□□□□□ -1.73
PCDH9-201ENST00000377861 PLSCR3Q9NRY6 295 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 ZNF585BQ52M93 769 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 DOCK2Q92608 1830 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 EML2O95834 649 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 VSIG10L2P0DP72 767 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 ZNF576Q9H609 170 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 FAM214BQ7L5A3 538 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 COX6CP09669 75 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 FA2HQ7L5A8 372 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 TMEM217Q8N7C4 229 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 PRR27Q6MZM9 219 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 MMD2Q8IY49 270 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 OR10D4PQ8NGN7 298 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 GPR27Q9NS67 375 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 TLE1Q04724 770 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 IMMP1LQ96LU5 166 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 LINC00052Q96N35 136 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 KIAA1324LA8MWY0 1029 aaPredicted RBP4.26□□□□□ -1.73
PCDH9-201ENST00000377861 M0R1X1 148 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 C1QTNF9P0C862 333 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 GATSQ8NAP1 163 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 OR52B4Q8NGK2 314 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 DPRXA6NFQ7 191 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 ZNF708P17019 499 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 MRPS11P82912 194 aaKnown RBP4.26□□□□□ -1.73
PCDH9-201ENST00000377861 FUT5Q11128 374 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 VWA1Q6PCB0 445 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 ADAT3Q96EY9 351 aaPredicted RBP4.26□□□□□ -1.73
PCDH9-201ENST00000377861 ZNF230Q9UIE0 474 aaPredicted RBP4.26□□□□□ -1.73
PCDH9-201ENST00000377861 KCNS1Q96KK3 526 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 RNASE12Q5GAN4 147 aaKnown RBP4.26□□□□□ -1.73
PCDH9-201ENST00000377861 C1orf122Q6ZSJ8 110 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 ZNF501Q96CX3 271 aaPredicted RBP4.26□□□□□ -1.73
PCDH9-201ENST00000377861 INS-IGF2F8WCM5 200 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 APCSP02743 223 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 OR10AD1Q8NGE0 317 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 OR1N2Q8NGR9 330 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 DERL1Q9BUN8 251 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 NUPL2O15504 423 aaKnown RBP4.26□□□□□ -1.73
PCDH9-201ENST00000377861 ZNF735P0CB33 412 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 FAHP16930 419 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 PHLDA2Q53GA4 152 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 TIMM23BQ5SRD1 257 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 HINT2Q9BX68 163 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 RNF7Q9UBF6 113 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 MYH3P11055 1940 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 COX7A2P2O60397 106 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 C1QCP02747 245 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 CHEK1O14757 476 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 ARG1P05089 322 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 EGR4Q05215 589 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 IL15RAQ13261 267 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 SLC25A48Q6ZT89 311 aaKnown RBP4.26□□□□□ -1.73
PCDH9-201ENST00000377861 NUDT22Q9BRQ3 303 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 SCNM1Q9BWG6 230 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 ZMAT3Q9HA38 289 aaKnown RBP4.26□□□□□ -1.73
PCDH9-201ENST00000377861 HYPMO75409 117 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 CLEC2AQ6UVW9 174 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 TBC1D26Q86UD7 250 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 TDHQ8IZJ6 230 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 AMER3Q8N944 861 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 CD226Q15762 336 aa4.26□□□□□ -1.73
PCDH9-201ENST00000377861 CARD17Q5XLA6 110 aa4.25□□□□□ -1.73
PCDH9-201ENST00000377861 GAPTQ8N292 157 aa4.25□□□□□ -1.73
PCDH9-201ENST00000377861 C1orf185Q5T7R7 199 aa4.25□□□□□ -1.73
PCDH9-201ENST00000377861 REG4Q9BYZ8 158 aa4.25□□□□□ -1.73
PCDH9-201ENST00000377861 NEUROG3Q9Y4Z2 214 aa4.25□□□□□ -1.73
PCDH9-201ENST00000377861 TRAV39A0A0B4J263 110 aa4.25□□□□□ -1.73
PCDH9-201ENST00000377861 PTTG1IPP53801 180 aa4.25□□□□□ -1.73
PCDH9-201ENST00000377861 FAM27D1Q5T7N8 215 aa4.25□□□□□ -1.73
PCDH9-201ENST00000377861 ORAOV1Q8WV07 137 aa4.25□□□□□ -1.73
PCDH9-201ENST00000377861 RPL7P18124 248 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms