RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 LFNGQ8NES3 379 aa17.02■□□□□ 0.32
SPG7-202ENST00000341316 OR10J5Q8NHC4 309 aa17.02■□□□□ 0.32
SPG7-202ENST00000341316 ABHD14AQ9BUJ0 271 aa17.02■□□□□ 0.32
SPG7-202ENST00000341316 METTL1Q9UBP6 276 aaKnown RBP17.02■□□□□ 0.32
SPG7-202ENST00000341316 OR2W1Q9Y3N9 320 aa17.02■□□□□ 0.32
SPG7-202ENST00000341316 ZNF292O60281 2723 aa17.02■□□□□ 0.31
SPG7-202ENST00000341316 SLC33A1O00400 549 aaPredicted RBP17.01■□□□□ 0.31
SPG7-202ENST00000341316 NXPH3O95157 252 aa17.01■□□□□ 0.31
SPG7-202ENST00000341316 HOXA4Q00056 320 aaPredicted RBP17.01■□□□□ 0.31
SPG7-202ENST00000341316 UBALD1Q8TB05 177 aa17.01■□□□□ 0.31
SPG7-202ENST00000341316 CABLES2Q9BTV7 478 aa17.01■□□□□ 0.31
SPG7-202ENST00000341316 SEBOXQ9HB31 216 aaPredicted RBP17.01■□□□□ 0.31
SPG7-202ENST00000341316 MGAQ8IWI9 3026 aa17.01■□□□□ 0.31
SPG7-202ENST00000341316 OMGP23515 440 aa17.01■□□□□ 0.31
SPG7-202ENST00000341316 ATP6V0CP27449 155 aa17.01■□□□□ 0.31
SPG7-202ENST00000341316 OR2B8PP59922 312 aa17.01■□□□□ 0.31
SPG7-202ENST00000341316 CCL20P78556 96 aa17.01■□□□□ 0.31
SPG7-202ENST00000341316 CMTM1Q8IZ96 169 aa17.01■□□□□ 0.31
SPG7-202ENST00000341316 OR2G3Q8NGZ4 309 aa17.01■□□□□ 0.31
SPG7-202ENST00000341316 LINC00587B1AMM8 73 aa17■□□□□ 0.31
SPG7-202ENST00000341316 H0Y980 276 aa17■□□□□ 0.31
SPG7-202ENST00000341316 SSSCA1O60232 199 aa17■□□□□ 0.31
SPG7-202ENST00000341316 IGHV2-5P01817 119 aa17■□□□□ 0.31
SPG7-202ENST00000341316 GRPP07492 148 aa17■□□□□ 0.31
SPG7-202ENST00000341316 PGA5P0DJD9 388 aa17■□□□□ 0.31
SPG7-202ENST00000341316 RAC2P15153 192 aa17■□□□□ 0.31
SPG7-202ENST00000341316 FOXF2Q12947 444 aa17■□□□□ 0.31
SPG7-202ENST00000341316 PRR18Q8N4B5 295 aa17■□□□□ 0.31
SPG7-202ENST00000341316 WDR31Q8NA23 367 aa17■□□□□ 0.31
SPG7-202ENST00000341316 ZNF251Q9BRH9 671 aa17■□□□□ 0.31
SPG7-202ENST00000341316 PUS1Q9Y606 427 aaKnown RBP eCLIP17■□□□□ 0.31
SPG7-202ENST00000341316 A0A1B0GW64 132 aa17■□□□□ 0.31
SPG7-202ENST00000341316 CLEC18AA5D8T8 446 aa17■□□□□ 0.31
SPG7-202ENST00000341316 IQCF6A8MYZ5 107 aa17■□□□□ 0.31
SPG7-202ENST00000341316 TMEM50AO95807 157 aa17■□□□□ 0.31
SPG7-202ENST00000341316 IGLV2-14P01704 120 aa17■□□□□ 0.31
SPG7-202ENST00000341316 NQO2P16083 231 aa17■□□□□ 0.31
SPG7-202ENST00000341316 INO80CQ6PI98 192 aaPredicted RBP17■□□□□ 0.31
SPG7-202ENST00000341316 ZNF497Q6ZNH5 498 aa17■□□□□ 0.31
SPG7-202ENST00000341316 CLEC18CQ8NCF0 446 aa17■□□□□ 0.31
SPG7-202ENST00000341316 OR5D13Q8NGL4 314 aa17■□□□□ 0.31
SPG7-202ENST00000341316 KLF14Q8TD94 323 aaPredicted RBP17■□□□□ 0.31
SPG7-202ENST00000341316 A0A0G2JRQ6 117 aa16.99■□□□□ 0.31
SPG7-202ENST00000341316 AQP7O14520 342 aa16.99■□□□□ 0.31
SPG7-202ENST00000341316 PITX3O75364 302 aa16.99■□□□□ 0.31
SPG7-202ENST00000341316 FABP1P07148 127 aa16.99■□□□□ 0.31
SPG7-202ENST00000341316 OR8U8P0C7N1 319 aa16.99■□□□□ 0.31
SPG7-202ENST00000341316 VDAC1P21796 283 aa16.99■□□□□ 0.31
SPG7-202ENST00000341316 F2RP25116 425 aa16.99■□□□□ 0.31
SPG7-202ENST00000341316 CEBPDP49716 269 aaPredicted RBP16.99■□□□□ 0.31
SPG7-202ENST00000341316 ZNF266Q14584 549 aa16.99■□□□□ 0.31
SPG7-202ENST00000341316 SOHLH1Q5JUK2 328 aa16.99■□□□□ 0.31
SPG7-202ENST00000341316 ODF3L1Q8IXM7 274 aa16.99■□□□□ 0.31
SPG7-202ENST00000341316 OR51H1Q8NH63 302 aa16.99■□□□□ 0.31
SPG7-202ENST00000341316 TMEM171Q8WVE6 324 aa16.99■□□□□ 0.31
SPG7-202ENST00000341316 NIT2Q9NQR4 276 aa16.99■□□□□ 0.31
SPG7-202ENST00000341316 TINAGQ9UJW2 476 aa16.99■□□□□ 0.31
SPG7-202ENST00000341316 POLDIP2Q9Y2S7 368 aa16.99■□□□□ 0.31
SPG7-202ENST00000341316 RPS23P62266 143 aaKnown RBP16.99■□□□□ 0.31
SPG7-202ENST00000341316 TESK1Q15569 626 aa16.99■□□□□ 0.31
SPG7-202ENST00000341316 MALSU1Q96EH3 234 aa16.99■□□□□ 0.31
SPG7-202ENST00000341316 SPIN2AQ99865 258 aa16.99■□□□□ 0.31
SPG7-202ENST00000341316 SPIN2BQ9BPZ2 258 aa16.99■□□□□ 0.31
SPG7-202ENST00000341316 TRAV17A0A0B4J275 112 aa16.98■□□□□ 0.31
SPG7-202ENST00000341316 PROB1E7EW31 1015 aa16.98■□□□□ 0.31
SPG7-202ENST00000341316 MLNRO43193 412 aa16.98■□□□□ 0.31
SPG7-202ENST00000341316 NXPH2O95156 264 aa16.98■□□□□ 0.31
SPG7-202ENST00000341316 ID3Q02535 119 aa16.98■□□□□ 0.31
SPG7-202ENST00000341316 DEFB109BQ30KR1 87 aa16.98■□□□□ 0.31
SPG7-202ENST00000341316 GSN-AS1Q9NRJ2 163 aa16.98■□□□□ 0.31
SPG7-202ENST00000341316 TAAR3PQ9P1P4 343 aa16.98■□□□□ 0.31
SPG7-202ENST00000341316 IGKV3-15P01624 115 aa16.98■□□□□ 0.31
SPG7-202ENST00000341316 COX5AP20674 150 aa16.98■□□□□ 0.31
SPG7-202ENST00000341316 ZNF146Q15072 292 aa16.98■□□□□ 0.31
SPG7-202ENST00000341316 OR8G1Q15617 311 aa16.98■□□□□ 0.31
SPG7-202ENST00000341316 SPSB3Q6PJ21 355 aa16.98■□□□□ 0.31
SPG7-202ENST00000341316 CXorf67Q86X51 503 aaPredicted RBP16.98■□□□□ 0.31
SPG7-202ENST00000341316 Q8IYB0 196 aa16.98■□□□□ 0.31
SPG7-202ENST00000341316 PLEKHF2Q9H8W4 249 aa16.98■□□□□ 0.31
SPG7-202ENST00000341316 ZFHX2Q9C0A1 2572 aaPredicted RBP16.97■□□□□ 0.31
SPG7-202ENST00000341316 DUXBA0A1W2PPF3 345 aa16.97■□□□□ 0.31
SPG7-202ENST00000341316 RBFOX3A6NFN3 312 aa16.97■□□□□ 0.31
SPG7-202ENST00000341316 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.97■□□□□ 0.31
SPG7-202ENST00000341316 OR2C1O95371 312 aa16.97■□□□□ 0.31
SPG7-202ENST00000341316 PSG2P11465 335 aa16.97■□□□□ 0.31
SPG7-202ENST00000341316 IZUMO4Q1ZYL8 232 aa16.97■□□□□ 0.31
SPG7-202ENST00000341316 ZNF826PQ6ZT77 177 aa16.97■□□□□ 0.31
SPG7-202ENST00000341316 TMEM252Q8N6L7 170 aa16.97■□□□□ 0.31
SPG7-202ENST00000341316 OR10V1Q8NGI7 309 aa16.97■□□□□ 0.31
SPG7-202ENST00000341316 LYRM2Q9NU23 88 aaPredicted RBP16.97■□□□□ 0.31
SPG7-202ENST00000341316 TREM2Q9NZC2 230 aa16.97■□□□□ 0.31
SPG7-202ENST00000341316 TRAPPC2LQ9UL33 140 aa16.97■□□□□ 0.31
SPG7-202ENST00000341316 NPIPB11E5RHQ5 1161 aa16.96■□□□□ 0.31
SPG7-202ENST00000341316 TXNL1O43396 289 aa16.96■□□□□ 0.31
SPG7-202ENST00000341316 MDH2P40926 338 aaKnown RBP16.96■□□□□ 0.31
SPG7-202ENST00000341316 OR5C1Q8NGR4 320 aa16.96■□□□□ 0.31
SPG7-202ENST00000341316 TAAR6Q96RI8 345 aa16.96■□□□□ 0.31
SPG7-202ENST00000341316 TCEAL7Q9BRU2 100 aa16.96■□□□□ 0.31
SPG7-202ENST00000341316 AKAP13Q12802 2813 aa16.96■□□□□ 0.31
SPG7-202ENST00000341316 AP4M1O00189 453 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms