RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 TMEM41BQ5BJD5 291 aa16.24■□□□□ 0.19
RTN4-201ENST00000317610 AGMATQ9BSE5 352 aa16.24■□□□□ 0.19
RTN4-201ENST00000317610 ZNF552Q9H707 407 aaPredicted RBP16.24■□□□□ 0.19
RTN4-201ENST00000317610 LRFN1Q9P244 771 aa16.24■□□□□ 0.19
RTN4-201ENST00000317610 IGKV1-5P01602 117 aa16.23■□□□□ 0.19
RTN4-201ENST00000317610 METTL15P1P0C7V9 234 aa16.23■□□□□ 0.19
RTN4-201ENST00000317610 FABP4P15090 132 aa16.23■□□□□ 0.19
RTN4-201ENST00000317610 FGF8P55075 233 aaPredicted RBP16.23■□□□□ 0.19
RTN4-201ENST00000317610 HBG1P69891 147 aa16.23■□□□□ 0.19
RTN4-201ENST00000317610 HBG2P69892 147 aa16.23■□□□□ 0.19
RTN4-201ENST00000317610 Q0VFX4 171 aa16.23■□□□□ 0.19
RTN4-201ENST00000317610 WDR25Q64LD2 544 aaPredicted RBP16.23■□□□□ 0.19
RTN4-201ENST00000317610 OR5P3Q8WZ94 311 aa16.23■□□□□ 0.19
RTN4-201ENST00000317610 PINX1Q96BK5 328 aaKnown RBP16.23■□□□□ 0.19
RTN4-201ENST00000317610 C14orf144Q96I85 54 aa16.23■□□□□ 0.19
RTN4-201ENST00000317610 SSX3Q99909 188 aa16.23■□□□□ 0.19
RTN4-201ENST00000317610 PRRG4Q9BZD6 226 aa16.23■□□□□ 0.19
RTN4-201ENST00000317610 PITPNC1Q9UKF7 332 aa16.23■□□□□ 0.19
RTN4-201ENST00000317610 NTN3O00634 580 aaPredicted RBP16.23■□□□□ 0.19
RTN4-201ENST00000317610 IGHEP01854 428 aa16.23■□□□□ 0.19
RTN4-201ENST00000317610 CCL2P13500 99 aa16.23■□□□□ 0.19
RTN4-201ENST00000317610 GAMTQ14353 236 aa16.23■□□□□ 0.19
RTN4-201ENST00000317610 RNASE11Q8TAA1 199 aaKnown RBP16.23■□□□□ 0.19
RTN4-201ENST00000317610 STRADBQ9C0K7 418 aa16.23■□□□□ 0.19
RTN4-201ENST00000317610 WDR61Q9GZS3 305 aaKnown RBP16.23■□□□□ 0.19
RTN4-201ENST00000317610 PRUNE2Q8WUY3 3088 aa16.23■□□□□ 0.19
RTN4-201ENST00000317610 CD300LBA8K4G0 201 aa16.22■□□□□ 0.19
RTN4-201ENST00000317610 IFNA1P01562 189 aa16.22■□□□□ 0.19
RTN4-201ENST00000317610 PGA5P0DJD9 388 aa16.22■□□□□ 0.19
RTN4-201ENST00000317610 IAPPP10997 89 aa16.22■□□□□ 0.19
RTN4-201ENST00000317610 PKIAP61925 76 aa16.22■□□□□ 0.19
RTN4-201ENST00000317610 PPP1R32Q7Z5V6 425 aa16.22■□□□□ 0.19
RTN4-201ENST00000317610 HIST1H2AAQ96QV6 131 aa16.22■□□□□ 0.19
RTN4-201ENST00000317610 HIST1H2BLQ99880 126 aa16.22■□□□□ 0.19
RTN4-201ENST00000317610 PYGO2Q9BRQ0 406 aa16.22■□□□□ 0.19
RTN4-201ENST00000317610 UBE2ZQ9H832 354 aaPredicted RBP16.22■□□□□ 0.19
RTN4-201ENST00000317610 PINLYPA6NC86 204 aa16.22■□□□□ 0.19
RTN4-201ENST00000317610 GDF1P27539 372 aa16.22■□□□□ 0.19
RTN4-201ENST00000317610 RDH5Q92781 318 aa16.22■□□□□ 0.19
RTN4-201ENST00000317610 DLL3Q9NYJ7 618 aa16.22■□□□□ 0.19
RTN4-201ENST00000317610 A0A096LPE4 126 aa16.21■□□□□ 0.19
RTN4-201ENST00000317610 A0A1W2PPZ6 126 aa16.21■□□□□ 0.19
RTN4-201ENST00000317610 MAP1LC3B2A6NCE7 125 aa16.21■□□□□ 0.19
RTN4-201ENST00000317610 ZNF503-AS2A6NEH8 195 aa16.21■□□□□ 0.19
RTN4-201ENST00000317610 HS3ST1O14792 307 aa16.21■□□□□ 0.19
RTN4-201ENST00000317610 ZNHIT1O43257 154 aa16.21■□□□□ 0.19
RTN4-201ENST00000317610 LY86O95711 162 aa16.21■□□□□ 0.19
RTN4-201ENST00000317610 IFNA10P01566 189 aa16.21■□□□□ 0.19
RTN4-201ENST00000317610 TESK1Q15569 626 aa16.21■□□□□ 0.19
RTN4-201ENST00000317610 OR5R1Q8NH85 324 aa16.21■□□□□ 0.19
RTN4-201ENST00000317610 PACRGQ96M98 296 aaPredicted RBP16.21■□□□□ 0.19
RTN4-201ENST00000317610 ZNF488Q96MN9 340 aa16.21■□□□□ 0.19
RTN4-201ENST00000317610 MAP1LC3BQ9GZQ8 125 aa16.21■□□□□ 0.19
RTN4-201ENST00000317610 OR1A1Q9P1Q5 309 aa16.21■□□□□ 0.19
RTN4-201ENST00000317610 NAT8Q9UHE5 227 aa16.21■□□□□ 0.19
RTN4-201ENST00000317610 CEBPZOSA8MTT3 80 aa16.2■□□□□ 0.18
RTN4-201ENST00000317610 PAX1P15863 534 aa16.2■□□□□ 0.18
RTN4-201ENST00000317610 ZNF585BQ52M93 769 aa16.2■□□□□ 0.18
RTN4-201ENST00000317610 FAM58AQ8N1B3 248 aa16.2■□□□□ 0.18
RTN4-201ENST00000317610 OR10A7Q8NGE5 316 aa16.2■□□□□ 0.18
RTN4-201ENST00000317610 S100PBPQ96BU1 408 aa16.2■□□□□ 0.18
RTN4-201ENST00000317610 SRD5A3Q9H8P0 318 aa16.2■□□□□ 0.18
RTN4-201ENST00000317610 OR5B21A6NL26 309 aa16.2■□□□□ 0.18
RTN4-201ENST00000317610 NGFP01138 241 aa16.2■□□□□ 0.18
RTN4-201ENST00000317610 C4orf17Q53FE4 359 aa16.2■□□□□ 0.18
RTN4-201ENST00000317610 TCEAL6Q6IPX3 200 aa16.2■□□□□ 0.18
RTN4-201ENST00000317610 CYP2G1PQ6ZSU1 146 aa16.2■□□□□ 0.18
RTN4-201ENST00000317610 REC114Q7Z4M0 266 aa16.2■□□□□ 0.18
RTN4-201ENST00000317610 ZNF573Q86YE8 665 aa16.2■□□□□ 0.18
RTN4-201ENST00000317610 LILRB2Q8N423 598 aa16.2■□□□□ 0.18
RTN4-201ENST00000317610 OR4X1Q8NH49 305 aa16.2■□□□□ 0.18
RTN4-201ENST00000317610 POM121L2Q96KW2 1035 aa16.2■□□□□ 0.18
RTN4-201ENST00000317610 OR4C12Q96R67 309 aa16.2■□□□□ 0.18
RTN4-201ENST00000317610 RBKSQ9H477 322 aa16.2■□□□□ 0.18
RTN4-201ENST00000317610 TIMM9Q9Y5J7 89 aa16.2■□□□□ 0.18
RTN4-201ENST00000317610 PFN1P07737 140 aaKnown RBP16.19■□□□□ 0.18
RTN4-201ENST00000317610 C9orf135Q5VTT2 229 aa16.19■□□□□ 0.18
RTN4-201ENST00000317610 CENPVQ7Z7K6 275 aaPredicted RBP16.19■□□□□ 0.18
RTN4-201ENST00000317610 RHOVQ96L33 236 aa16.19■□□□□ 0.18
RTN4-201ENST00000317610 SNX22Q96L94 193 aa16.19■□□□□ 0.18
RTN4-201ENST00000317610 PKIBQ9C010 78 aa16.19■□□□□ 0.18
RTN4-201ENST00000317610 PILRBQ9UKJ0 227 aa16.19■□□□□ 0.18
RTN4-201ENST00000317610 MPC1Q9Y5U8 109 aa16.19■□□□□ 0.18
RTN4-201ENST00000317610 CHD3Q12873 2000 aaKnown RBP16.19■□□□□ 0.18
RTN4-201ENST00000317610 ZNF407Q9C0G0 2248 aa16.19■□□□□ 0.18
RTN4-201ENST00000317610 JMJD7P0C870 316 aa16.19■□□□□ 0.18
RTN4-201ENST00000317610 GNG3P63215 75 aa16.19■□□□□ 0.18
RTN4-201ENST00000317610 Q6P435 159 aa16.19■□□□□ 0.18
RTN4-201ENST00000317610 MOB1BQ7L9L4 216 aa16.19■□□□□ 0.18
RTN4-201ENST00000317610 TMEM183AQ8IXX5 376 aa16.19■□□□□ 0.18
RTN4-201ENST00000317610 TAF15Q92804 592 aaKnown RBP eCLIP16.19■□□□□ 0.18
RTN4-201ENST00000317610 LIN7CQ9NUP9 197 aaKnown RBP16.19■□□□□ 0.18
RTN4-201ENST00000317610 UFSP2Q9NUQ7 469 aa16.19■□□□□ 0.18
RTN4-201ENST00000317610 WDR87Q6ZQQ6 2873 aa16.18■□□□□ 0.18
RTN4-201ENST00000317610 SMCO3A2RU48 225 aa16.18■□□□□ 0.18
RTN4-201ENST00000317610 FAM90A26D6RGX4 464 aa16.18■□□□□ 0.18
RTN4-201ENST00000317610 ZNF737O75373 536 aa16.18■□□□□ 0.18
RTN4-201ENST00000317610 DDTP30046 118 aa16.18■□□□□ 0.18
RTN4-201ENST00000317610 IL2RGP31785 369 aa16.18■□□□□ 0.18
RTN4-201ENST00000317610 FOXG1P55316 489 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms