RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 OR52E5Q8NH55 327 aa4.92□□□□□ -1.62
RFX4-201ENST00000229387 ZNF418Q8TF45 676 aaPredicted RBP4.92□□□□□ -1.62
RFX4-201ENST00000229387 CFHR4Q92496 578 aa4.92□□□□□ -1.62
RFX4-201ENST00000229387 FGGYQ96C11 551 aa4.92□□□□□ -1.62
RFX4-201ENST00000229387 SPANXA1Q9NS26 97 aa4.92□□□□□ -1.62
RFX4-201ENST00000229387 WSB2Q9NYS7 404 aaPredicted RBP4.92□□□□□ -1.62
RFX4-201ENST00000229387 FBLN5Q9UBX5 448 aa4.92□□□□□ -1.62
RFX4-201ENST00000229387 TRAPPC2LQ9UL33 140 aa4.92□□□□□ -1.62
RFX4-201ENST00000229387 MRPS28Q9Y2Q9 187 aaKnown RBP4.92□□□□□ -1.62
RFX4-201ENST00000229387 PXMP4Q9Y6I8 212 aa4.92□□□□□ -1.62
RFX4-201ENST00000229387 COL4A3Q01955 1670 aa4.92□□□□□ -1.62
RFX4-201ENST00000229387 TRAV38-1A0A0B4J264 116 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 DIRC3C9JPN6 131 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 CNIH1O95406 144 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 DDAH2O95865 285 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 HBZP02008 142 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 EDNRAP25101 427 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 F2RP25116 425 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 RPS21P63220 83 aaKnown RBP4.91□□□□□ -1.62
RFX4-201ENST00000229387 RAB32Q13637 225 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 TMEM52Q8NDY8 209 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 NUP43Q8NFH3 380 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 OR2AJ1Q8NGZ0 328 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 OR8S1Q8NH09 359 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 CLDND2Q8NHS1 167 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 NEURL3Q96EH8 262 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 LINC00615Q96LM1 132 aaPredicted RBP4.91□□□□□ -1.62
RFX4-201ENST00000229387 FANCD2OSQ96PS1 177 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 OR5B12Q96R08 314 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 P2RX4Q99571 388 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 HSPB9Q9BQS6 159 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 LPAR5Q9H1C0 372 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 NPVFQ9HCQ7 196 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 AP5S1Q9NUS5 200 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 BOKQ9UMX3 212 aaPredicted RBP4.91□□□□□ -1.62
RFX4-201ENST00000229387 UFC1Q9Y3C8 167 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 URB1O60287 2271 aaKnown RBP4.91□□□□□ -1.62
RFX4-201ENST00000229387 OBSL1O75147 1896 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 FAM90A27PA6NNH2 459 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 ZNF736B4DX44 427 aaPredicted RBP4.91□□□□□ -1.62
RFX4-201ENST00000229387 GYPBP06028 91 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 FTH1P19P0C7X4 201 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 ZNF43P17038 809 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 ATP6V0CP27449 155 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 NTSR1P30989 418 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 IAH1Q2TAA2 248 aaPredicted RBP4.91□□□□□ -1.62
RFX4-201ENST00000229387 ABHD17BQ5VST6 288 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 RPTNQ6XPR3 784 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 VN1R4Q7Z5H5 301 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 GATSQ8NAP1 163 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 TMEM255BQ8WV15 326 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 BMFQ96LC9 184 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 MCHR1Q99705 422 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 PARLQ9H300 379 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 HINT3Q9NQE9 182 aaKnown RBP4.91□□□□□ -1.62
RFX4-201ENST00000229387 MRM2Q9UI43 246 aaKnown RBP4.91□□□□□ -1.62
RFX4-201ENST00000229387 A0A0A6YYD5 115 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 TRAV1-1A0A0B4J248 108 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 LOC102723971A0A1B0GUV8 181 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 CEACAM18A8MTB9 384 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 TMPRSS2O15393 492 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 DEDDO75618 318 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 CYB5AP00167 134 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 HBE1P02100 147 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 PSG2P11465 335 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 ZNF708P17019 499 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 GALR1P47211 349 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 CCL20P78556 96 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 MSMO1Q15800 293 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 PMCHL1Q16048 86 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 TMEM128Q5BJH2 165 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 CST9LP1Q5W188 147 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 WBP2NLQ6ICG8 309 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 MRPL54Q6P161 138 aaKnown RBP4.91□□□□□ -1.62
RFX4-201ENST00000229387 C12orf54Q6X4T0 127 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 Q6ZSR6 202 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 RAB42Q8N4Z0 105 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 OR5A1Q8NGJ0 315 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 MBD6Q96DN6 1003 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 PARP12Q9H0J9 701 aaKnown RBP4.91□□□□□ -1.62
RFX4-201ENST00000229387 MANBALQ9NQG1 85 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 FSCN3Q9NQT6 498 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 CISD1Q9NZ45 108 aaKnown RBP4.91□□□□□ -1.62
RFX4-201ENST00000229387 VDAC3Q9Y277 283 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 HEATR5BQ9P2D3 2071 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 ASPMQ8IZT6 3477 aa4.91□□□□□ -1.62
RFX4-201ENST00000229387 SNRNP200O75643 2136 aaKnown RBP4.91□□□□□ -1.62
RFX4-201ENST00000229387 C5orf67F2Z3F1 127 aa4.9□□□□□ -1.62
RFX4-201ENST00000229387 SNAI2O43623 268 aa4.9□□□□□ -1.62
RFX4-201ENST00000229387 GUCA1AP43080 201 aaPredicted RBP4.9□□□□□ -1.62
RFX4-201ENST00000229387 GPM6AP51674 278 aa4.9□□□□□ -1.62
RFX4-201ENST00000229387 MTCP1P56278 107 aa4.9□□□□□ -1.62
RFX4-201ENST00000229387 LCN6P62502 163 aa4.9□□□□□ -1.62
RFX4-201ENST00000229387 HIST1H1AQ02539 215 aaPredicted RBP4.9□□□□□ -1.62
RFX4-201ENST00000229387 GABRA6Q16445 453 aa4.9□□□□□ -1.62
RFX4-201ENST00000229387 CEACAM21Q3KPI0 293 aa4.9□□□□□ -1.62
RFX4-201ENST00000229387 BVES-AS1Q5T3Y7 98 aa4.9□□□□□ -1.62
RFX4-201ENST00000229387 SAMD5Q5TGI4 173 aa4.9□□□□□ -1.62
RFX4-201ENST00000229387 WDR25Q64LD2 544 aaPredicted RBP4.9□□□□□ -1.62
RFX4-201ENST00000229387 DPY19L4Q7Z388 723 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms