RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 MRPL24Q96A35 216 aaKnown RBP11.53□□□□□ -0.56
COL1A1-201ENST00000225964 CORTO00230 105 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 PDE6DO43924 150 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 UPK3AO75631 287 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 SNRPCP09234 159 aaKnown RBP11.53□□□□□ -0.56
COL1A1-201ENST00000225964 HERPUD1Q15011 391 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 ADIPOQQ15848 244 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 FAM53AQ6NSI3 398 aaPredicted RBP11.53□□□□□ -0.56
COL1A1-201ENST00000225964 SLC35E3Q7Z769 313 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 ZAR1Q86SH2 424 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 MUC15Q8N387 334 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 ZNF253O75346 499 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 OR2T10Q8NGZ9 312 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 ZCCHC14Q8WYQ9 949 aaKnown RBP11.53□□□□□ -0.56
COL1A1-201ENST00000225964 URB1O60287 2271 aaKnown RBP11.53□□□□□ -0.56
COL1A1-201ENST00000225964 BTF3P20290 206 aaKnown RBP11.53□□□□□ -0.56
COL1A1-201ENST00000225964 MGAT2Q10469 447 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 LAMTOR1Q6IAA8 161 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 OVCH2Q7RTZ1 564 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 TMEM251Q8N6I4 163 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 PLPPR5Q32ZL2 321 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 CENPVQ7Z7K6 275 aaPredicted RBP11.53□□□□□ -0.56
COL1A1-201ENST00000225964 ZBTB34Q8NCN2 500 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 BET1LQ9NYM9 111 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 MOB4Q9Y3A3 225 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 TMEM189A5PLL7 270 aa11.52□□□□□ -0.56
COL1A1-201ENST00000225964 ISLRO14498 428 aa11.52□□□□□ -0.56
COL1A1-201ENST00000225964 OGG1O15527 345 aa11.52□□□□□ -0.56
COL1A1-201ENST00000225964 SP9P0CG40 484 aa11.52□□□□□ -0.56
COL1A1-201ENST00000225964 CTSSP25774 331 aa11.52□□□□□ -0.56
COL1A1-201ENST00000225964 PDLIM4P50479 330 aa11.52□□□□□ -0.56
COL1A1-201ENST00000225964 EWSR1Q01844 656 aaKnown RBP eCLIP11.52□□□□□ -0.56
COL1A1-201ENST00000225964 TIMP4Q99727 224 aa11.52□□□□□ -0.56
COL1A1-201ENST00000225964 ABCA3Q99758 1704 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 A0A1W2PPV9 198 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 IGHV4-34P06331 123 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 SLC25A53Q5H9E4 307 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 DMKNQ6E0U4 476 aaPredicted RBP11.52□□□□□ -0.57
COL1A1-201ENST00000225964 STXBP6Q8NFX7 210 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 PGLYRP3Q96LB9 341 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 VAX2Q9UIW0 290 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 SCN3AQ9NY46 2000 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 CEACAM18A8MTB9 384 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 LYZL2Q7Z4W2 148 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 FOCADQ5VW36 1801 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 PRR33A8MZF0 331 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 HYPMO75409 117 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 RELBQ01201 579 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 OR4B1Q8NGF8 309 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 WDFY2Q96P53 400 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 DDA1Q9BW61 102 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 AHRRA9YTQ3 701 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 HIST1H1BP16401 226 aaKnown RBP11.52□□□□□ -0.57
COL1A1-201ENST00000225964 RPL27AP46776 148 aaKnown RBP11.52□□□□□ -0.57
COL1A1-201ENST00000225964 INPP5JQ15735 1006 aaPredicted RBP11.52□□□□□ -0.57
COL1A1-201ENST00000225964 PRSS8Q16651 343 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 FAM214BQ7L5A3 538 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 FAM216AQ8WUB2 273 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 RAX2Q96IS3 184 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 LOXL4Q96JB6 756 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 DTX4Q9Y2E6 619 aa11.52□□□□□ -0.57
COL1A1-201ENST00000225964 A1L4Q6 167 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 PRR19A6NJB7 356 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 CLLU1Q5K131 121 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 LSMEM1Q8N8F7 131 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 IER3P46695 156 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 DLK1P80370 383 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 HCP5Q6MZN7 132 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 CALHM1Q8IU99 346 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 GPA33Q99795 319 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 ANGPTL4Q9BY76 406 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 IGKV3OR2-268A0A0C4DH90 116 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 OR8G5Q8NG78 346 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 ZNF502Q8TBZ5 544 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 ABHD14BQ96IU4 210 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 TBX15Q96SF7 602 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 SLIRPQ9GZT3 109 aaKnown RBP11.51□□□□□ -0.57
COL1A1-201ENST00000225964 RCC2Q9P258 522 aaKnown RBP11.51□□□□□ -0.57
COL1A1-201ENST00000225964 CBY1Q9Y3M2 126 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 MAS1LP35410 378 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 ZNF880Q6PDB4 577 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 NEU3Q9UQ49 428 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 MYO16Q9Y6X6 1858 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 A0A1W2PQF6 199 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 RBM11P57052 281 aaKnown RBP11.51□□□□□ -0.57
COL1A1-201ENST00000225964 SNRPEP62304 92 aaKnown RBP11.51□□□□□ -0.57
COL1A1-201ENST00000225964 KIAA1217Q5T5P2 1943 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 ZNF519Q8TB69 540 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 CHST5Q9GZS9 411 aa11.51□□□□□ -0.57
COL1A1-201ENST00000225964 H7C2G1 150 aa11.5□□□□□ -0.57
COL1A1-201ENST00000225964 WDR25Q64LD2 544 aaPredicted RBP11.5□□□□□ -0.57
COL1A1-201ENST00000225964 ADAT3Q96EY9 351 aaPredicted RBP11.5□□□□□ -0.57
COL1A1-201ENST00000225964 ZDHHC8Q9ULC8 765 aa11.5□□□□□ -0.57
COL1A1-201ENST00000225964 HPRT1P00492 218 aa11.5□□□□□ -0.57
COL1A1-201ENST00000225964 HBZP02008 142 aa11.5□□□□□ -0.57
COL1A1-201ENST00000225964 MEOX2P50222 304 aa11.5□□□□□ -0.57
COL1A1-201ENST00000225964 ATP5G2Q06055 141 aa11.5□□□□□ -0.57
COL1A1-201ENST00000225964 SURF2Q15527 256 aaPredicted RBP11.5□□□□□ -0.57
COL1A1-201ENST00000225964 C1orf174Q8IYL3 243 aa11.5□□□□□ -0.57
COL1A1-201ENST00000225964 SLC22A18ASQ8N1D0 253 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms