RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Sf3b5Q923D4 86 aaKnown RBP12.3□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 EpcamQ99JW5 315 aa12.3□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Ascc3E9PZJ8 2198 aaKnown RBP12.3□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Olfr497Q8VG08 314 aa12.3□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Olfr1226Q8VGM5 310 aa12.3□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Mtg2A2AFK4 405 aa12.3□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Gm42421F6X8D5 166 aa12.3□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 NodalP43021 354 aa12.3□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Olfr1507Q0VEP0 313 aa12.3□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Klf11Q8K1S5 502 aa12.3□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Olfr108Q8VFA1 320 aa12.3□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Olfr790Q8VGJ3 322 aa12.3□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 5530401A14RikQ9D3H9 131 aa12.3□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Syt13Q9EQT6 426 aa12.3□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Icam4Q9ERM2 262 aa12.3□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Olfr936J3KMV2 267 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Hsd17b8P50171 259 aaKnown RBP12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Ankrd53Q3V0J4 497 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Coro2aQ8C0P5 524 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Lgi3Q8K406 548 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Gpx4Q91XR9 253 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Mrps24Q9CQV5 167 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Bola1Q9D8S9 137 aaKnown RBP12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 RetnlaQ9EP95 111 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 NagkQ9QZ08 343 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Gm6665F6Y363 85 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 MfngO09008 321 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Cd79bP15530 228 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Rims4P60191 269 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 KhkP97328 298 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 ArsgQ3TYD4 525 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Fblim1Q71FD7 375 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 BtlaQ7TSA3 306 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 CdiptQ8VDP6 213 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Znf281Q99LI5 893 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 2610524H06RikQ9CZU9 139 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Sval1Q9D2X6 151 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Spsb1Q9D5L7 273 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Fcrl6A1YIY0 268 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Olfr152G3X9L8 316 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 P01795 144 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Atp4bP50992 294 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Slc7a10P63115 530 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Olfr1427Q8VFU9 311 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Olfr1297Q8VGE8 312 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Mus81Q91ZJ0 551 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Gm9817Q9D2M0 144 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Vmn1r44Q9EQ47 310 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Zfp944E9PUS4 492 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Gm2663F6R7E8 247 aaKnown RBP12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Prr23a1G3UW32 258 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Klk1b1P00755 261 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Adamts4Q8BNJ2 833 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 GhsrQ99P50 364 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 1810009J06RikQ9CPN7 247 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Fzd2Q9JIP6 570 aa12.29□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Npepl1Q6NSR8 524 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Olfr1386Q7TQT0 309 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Asphd2Q80VP9 343 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 P4htmQ8BG58 503 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Gins1Q9CZ15 196 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Olfr465-ps1A0A0U1RPZ4 315 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Gm13769A2ATW2 309 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Zfp760E9QAF5 666 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 OtpO09113 325 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Igk-V19-17P01633 149 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Zfp30Q60585 533 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Slc16a13Q8CE94 428 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 ApehQ8R146 732 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Ntng2Q8R4F1 589 aaKnown RBP12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Srsf4Q8VE97 489 aaKnown RBP12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Rgs19Q9CX84 216 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Plekha2Q9ERS5 425 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Mrgpra9A0A140T8U8 332 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Tbx15O70306 602 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 ScimpQ3UU41 150 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Bloc1s3Q5U5M8 195 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Enkd1Q7TSV9 346 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Tmem106cQ80VP8 260 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 TecrlQ8BFZ1 361 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Pld4Q8BG07 503 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Zfp947Q8BIQ6 437 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Tctn1Q8BZ64 593 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 CmblQ8R1G2 245 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Olfr1241Q8VF91 314 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Olfr1240Q8VG73 314 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Zcchc10Q9CX48 178 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Ptp4a3Q9D658 173 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Scgb1b15A0A087WP50 93 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Vmn1r180B9EK86 305 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Olfr1287Q7TQY1 305 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Olfr923Q7TRB9 317 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Lrrc75aQ7TSF4 339 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Mrgpra4Q91WW2 313 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 IcaQ9DBD0 700 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Sfrp5Q9WU66 314 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Angpt4Q9WVH6 509 aa12.28□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Myo10F8VQB6 2062 aa12.27□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 LexmA2AVQ5 414 aa12.27□□□□□ -0.44
Pcdha1-202ENSMUST00000193839 Zfp229E9PWT2 705 aa12.27□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms