RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-223ENST00000617585 SYT6Q5T7P8 510 aaPredicted RBP17.77■□□□□ 0.44
ARHGEF1-223ENST00000617585 CENPVQ7Z7K6 275 aaPredicted RBP17.77■□□□□ 0.44
ARHGEF1-223ENST00000617585 LRRTM1Q86UE6 522 aa17.77■□□□□ 0.44
ARHGEF1-223ENST00000617585 NEK7Q8TDX7 302 aa17.77■□□□□ 0.44
ARHGEF1-223ENST00000617585 CCDC107Q8WV48 283 aa17.77■□□□□ 0.44
ARHGEF1-223ENST00000617585 SELENOIQ9C0D9 397 aa17.77■□□□□ 0.44
ARHGEF1-223ENST00000617585 BANF2Q9H503 90 aa17.77■□□□□ 0.44
ARHGEF1-223ENST00000617585 DUSP21Q9H596 190 aa17.77■□□□□ 0.44
ARHGEF1-223ENST00000617585 RAB9BQ9NP90 201 aa17.77■□□□□ 0.44
ARHGEF1-223ENST00000617585 ETAA1Q9NY74 926 aa17.77■□□□□ 0.44
ARHGEF1-223ENST00000617585 PEX16Q9Y5Y5 336 aa17.77■□□□□ 0.44
ARHGEF1-223ENST00000617585 C12orf77C9JDV5 145 aa17.76■□□□□ 0.43
ARHGEF1-223ENST00000617585 SDCBPO00560 298 aaPredicted RBP17.76■□□□□ 0.43
ARHGEF1-223ENST00000617585 HSD17B6O14756 317 aa17.76■□□□□ 0.43
ARHGEF1-223ENST00000617585 GAPDHP04406 335 aaKnown RBP17.76■□□□□ 0.43
ARHGEF1-223ENST00000617585 UBBP0CG47 229 aa17.76■□□□□ 0.43
ARHGEF1-223ENST00000617585 ZNF137PP52743 207 aa17.76■□□□□ 0.43
ARHGEF1-223ENST00000617585 GABPB1Q06547 395 aaPredicted RBP17.76■□□□□ 0.43
ARHGEF1-223ENST00000617585 INSL4Q14641 139 aa17.76■□□□□ 0.43
ARHGEF1-223ENST00000617585 C6orf183Q5T699 404 aa17.76■□□□□ 0.43
ARHGEF1-223ENST00000617585 TRAT1Q6PIZ9 186 aa17.76■□□□□ 0.43
ARHGEF1-223ENST00000617585 ZNF554Q86TJ5 538 aa17.76■□□□□ 0.43
ARHGEF1-223ENST00000617585 ZNF439Q8NDP4 499 aa17.76■□□□□ 0.43
ARHGEF1-223ENST00000617585 MBNL3Q9NUK0 354 aaKnown RBP17.76■□□□□ 0.43
ARHGEF1-223ENST00000617585 NOTCH3Q9UM47 2321 aa17.76■□□□□ 0.43
ARHGEF1-223ENST00000617585 DNAH3Q8TD57 4116 aa17.75■□□□□ 0.43
ARHGEF1-223ENST00000617585 IGHV1-3A0A0C4DH29 117 aa17.75■□□□□ 0.43
ARHGEF1-223ENST00000617585 A0A1W2PPE3 182 aa17.75■□□□□ 0.43
ARHGEF1-223ENST00000617585 G3V4G9 280 aa17.75■□□□□ 0.43
ARHGEF1-223ENST00000617585 CRTAPO75718 401 aaPredicted RBP17.75■□□□□ 0.43
ARHGEF1-223ENST00000617585 MYF6P23409 242 aa17.75■□□□□ 0.43
ARHGEF1-223ENST00000617585 SLC25A48Q6ZT89 311 aaKnown RBP17.75■□□□□ 0.43
ARHGEF1-223ENST00000617585 C1QL4Q86Z23 238 aa17.75■□□□□ 0.43
ARHGEF1-223ENST00000617585 IZUMO1Q8IYV9 350 aa17.75■□□□□ 0.43
ARHGEF1-223ENST00000617585 C5orf56Q8N8D9 126 aa17.75■□□□□ 0.43
ARHGEF1-223ENST00000617585 SGCDQ92629 289 aa17.75■□□□□ 0.43
ARHGEF1-223ENST00000617585 R3HDM4Q96D70 268 aa17.75■□□□□ 0.43
ARHGEF1-223ENST00000617585 ANKRD60Q9BZ19 345 aa17.75■□□□□ 0.43
ARHGEF1-223ENST00000617585 CST11Q9H112 138 aa17.75■□□□□ 0.43
ARHGEF1-223ENST00000617585 TRAPPC2LQ9UL33 140 aa17.75■□□□□ 0.43
ARHGEF1-223ENST00000617585 CCRL2O00421 344 aa17.74■□□□□ 0.43
ARHGEF1-223ENST00000617585 SPINT2O43291 252 aa17.74■□□□□ 0.43
ARHGEF1-223ENST00000617585 PDCD6O75340 191 aa17.74■□□□□ 0.43
ARHGEF1-223ENST00000617585 UCHL1P09936 223 aa17.74■□□□□ 0.43
ARHGEF1-223ENST00000617585 TMEM11P17152 192 aa17.74■□□□□ 0.43
ARHGEF1-223ENST00000617585 FAM27D1Q5T7N8 215 aa17.74■□□□□ 0.43
ARHGEF1-223ENST00000617585 STEAP3Q658P3 488 aa17.74■□□□□ 0.43
ARHGEF1-223ENST00000617585 Q8N6K4 173 aa17.74■□□□□ 0.43
ARHGEF1-223ENST00000617585 OR4K15Q8NH41 348 aa17.74■□□□□ 0.43
ARHGEF1-223ENST00000617585 ISYNA1Q9NPH2 558 aa17.74■□□□□ 0.43
ARHGEF1-223ENST00000617585 TPRKBQ9Y3C4 175 aa17.74■□□□□ 0.43
ARHGEF1-223ENST00000617585 SH2D7A6NKC9 451 aaPredicted RBP17.73■□□□□ 0.43
ARHGEF1-223ENST00000617585 IGKV1D-33P01593 117 aa17.73■□□□□ 0.43
ARHGEF1-223ENST00000617585 IGKV1-33P01594 117 aa17.73■□□□□ 0.43
ARHGEF1-223ENST00000617585 SRMP19623 302 aa17.73■□□□□ 0.43
ARHGEF1-223ENST00000617585 VHLP40337 213 aa17.73■□□□□ 0.43
ARHGEF1-223ENST00000617585 TPBGQ13641 420 aa17.73■□□□□ 0.43
ARHGEF1-223ENST00000617585 MED22Q15528 200 aa17.73■□□□□ 0.43
ARHGEF1-223ENST00000617585 GLT8D1Q68CQ7 371 aa17.73■□□□□ 0.43
ARHGEF1-223ENST00000617585 FAM53AQ6NSI3 398 aaPredicted RBP17.73■□□□□ 0.43
ARHGEF1-223ENST00000617585 WFDC9Q8NEX5 89 aa17.73■□□□□ 0.43
ARHGEF1-223ENST00000617585 UBALD1Q8TB05 177 aa17.73■□□□□ 0.43
ARHGEF1-223ENST00000617585 RTN4IP1Q8WWV3 396 aaPredicted RBP17.73■□□□□ 0.43
ARHGEF1-223ENST00000617585 TMED9Q9BVK6 235 aa17.73■□□□□ 0.43
ARHGEF1-223ENST00000617585 TSSC4Q9Y5U2 329 aaPredicted RBP17.73■□□□□ 0.43
ARHGEF1-223ENST00000617585 IGHV3-43A0A0B4J1X8 118 aa17.72■□□□□ 0.43
ARHGEF1-223ENST00000617585 HBZP02008 142 aa17.72■□□□□ 0.43
ARHGEF1-223ENST00000617585 IGHV3-43DP0DP04 118 aa17.72■□□□□ 0.43
ARHGEF1-223ENST00000617585 VSIG8P0DPA2 414 aa17.72■□□□□ 0.43
ARHGEF1-223ENST00000617585 RCC1P18754 421 aaPredicted RBP17.72■□□□□ 0.43
ARHGEF1-223ENST00000617585 IL3RAP26951 378 aa17.72■□□□□ 0.43
ARHGEF1-223ENST00000617585 CD1BP29016 333 aa17.72■□□□□ 0.43
ARHGEF1-223ENST00000617585 ZNF134P52741 427 aa17.72■□□□□ 0.43
ARHGEF1-223ENST00000617585 OR4X2Q8NGF9 303 aa17.72■□□□□ 0.43
ARHGEF1-223ENST00000617585 SLC22A1O15245 554 aa17.71■□□□□ 0.43
ARHGEF1-223ENST00000617585 IGHG2P01859 326 aa17.71■□□□□ 0.43
ARHGEF1-223ENST00000617585 CHATP28329 748 aa17.71■□□□□ 0.43
ARHGEF1-223ENST00000617585 RPS27AP62979 156 aaKnown RBP17.71■□□□□ 0.43
ARHGEF1-223ENST00000617585 HES1Q14469 280 aa17.71■□□□□ 0.43
ARHGEF1-223ENST00000617585 HSD17B12Q53GQ0 312 aa17.71■□□□□ 0.43
ARHGEF1-223ENST00000617585 CT45A1Q5HYN5 189 aa17.71■□□□□ 0.43
ARHGEF1-223ENST00000617585 RBM48Q5RL73 367 aaKnown RBP17.71■□□□□ 0.43
ARHGEF1-223ENST00000617585 LY6G6FQ5SQ64 297 aa17.71■□□□□ 0.43
ARHGEF1-223ENST00000617585 CEACAM19Q7Z692 300 aa17.71■□□□□ 0.43
ARHGEF1-223ENST00000617585 OR1L1Q8NH94 360 aa17.71■□□□□ 0.43
ARHGEF1-223ENST00000617585 CT45A3Q8NHU0 189 aa17.71■□□□□ 0.43
ARHGEF1-223ENST00000617585 MRPL30Q8TCC3 161 aaKnown RBP17.71■□□□□ 0.43
ARHGEF1-223ENST00000617585 UFD1Q92890 307 aa17.71■□□□□ 0.43
ARHGEF1-223ENST00000617585 EAF1Q96JC9 268 aaPredicted RBP17.71■□□□□ 0.43
ARHGEF1-223ENST00000617585 TM2D1Q9BX74 207 aa17.71■□□□□ 0.43
ARHGEF1-223ENST00000617585 TCRBV4S1A1TA0A5B7 111 aa17.7■□□□□ 0.42
ARHGEF1-223ENST00000617585 UBE2QL1A1L167 161 aa17.7■□□□□ 0.42
ARHGEF1-223ENST00000617585 TMEM14DPA8MWL7 114 aa17.7■□□□□ 0.42
ARHGEF1-223ENST00000617585 SLC31A2O15432 143 aa17.7■□□□□ 0.42
ARHGEF1-223ENST00000617585 TXNL1O43396 289 aa17.7■□□□□ 0.42
ARHGEF1-223ENST00000617585 MPIG6BO95866 241 aa17.7■□□□□ 0.42
ARHGEF1-223ENST00000617585 CRHBPP24387 322 aa17.7■□□□□ 0.42
ARHGEF1-223ENST00000617585 QRFPP83859 136 aa17.7■□□□□ 0.42
ARHGEF1-223ENST00000617585 TRAM1Q15629 374 aa17.7■□□□□ 0.42
ARHGEF1-223ENST00000617585 LIPKQ5VXJ0 399 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms