RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 DUSP13Q9UII6 198 aa12.71□□□□□ -0.38
VPS36-207ENST00000611132 PDE6DO43924 150 aa12.71□□□□□ -0.38
VPS36-207ENST00000611132 CCL2P13500 99 aa12.71□□□□□ -0.38
VPS36-207ENST00000611132 STPG1Q5TH74 334 aa12.71□□□□□ -0.38
VPS36-207ENST00000611132 OR10D3Q8NH80 312 aa12.71□□□□□ -0.38
VPS36-207ENST00000611132 HLA-CQ95604 372 aa12.71□□□□□ -0.38
VPS36-207ENST00000611132 NAGKQ9UJ70 344 aa12.71□□□□□ -0.38
VPS36-207ENST00000611132 TRAF3IP2O43734 574 aaPredicted RBP12.7□□□□□ -0.38
VPS36-207ENST00000611132 FAM157CP0CG43 387 aa12.7□□□□□ -0.38
VPS36-207ENST00000611132 RPEL1Q2QD12 228 aa12.7□□□□□ -0.38
VPS36-207ENST00000611132 SPINK9Q5DT21 86 aa12.7□□□□□ -0.38
VPS36-207ENST00000611132 WDR73Q6P4I2 378 aa12.7□□□□□ -0.38
VPS36-207ENST00000611132 SELENOHQ8IZQ5 122 aaKnown RBP12.7□□□□□ -0.38
VPS36-207ENST00000611132 SGMS2Q8NHU3 365 aa12.7□□□□□ -0.38
VPS36-207ENST00000611132 DTD1Q8TEA8 209 aa12.7□□□□□ -0.38
VPS36-207ENST00000611132 RHBDD1Q8TEB9 315 aa12.7□□□□□ -0.38
VPS36-207ENST00000611132 SRD5A3Q9H8P0 318 aa12.7□□□□□ -0.38
VPS36-207ENST00000611132 EFEMP2O95967 443 aa12.7□□□□□ -0.38
VPS36-207ENST00000611132 FOXL2P58012 376 aa12.7□□□□□ -0.38
VPS36-207ENST00000611132 OR2H1Q9GZK4 316 aa12.7□□□□□ -0.38
VPS36-207ENST00000611132 TMEM38BQ9NVV0 291 aa12.7□□□□□ -0.38
VPS36-207ENST00000611132 BET1LQ9NYM9 111 aa12.7□□□□□ -0.38
VPS36-207ENST00000611132 LOC102723971A0A1B0GUV8 181 aa12.7□□□□□ -0.38
VPS36-207ENST00000611132 IGSF23A1L1A6 192 aa12.7□□□□□ -0.38
VPS36-207ENST00000611132 IGHV4-34P06331 123 aa12.7□□□□□ -0.38
VPS36-207ENST00000611132 SRP14P37108 136 aaKnown RBP12.7□□□□□ -0.38
VPS36-207ENST00000611132 HYAL1Q12794 435 aa12.7□□□□□ -0.38
VPS36-207ENST00000611132 LRP11Q86VZ4 500 aa12.7□□□□□ -0.38
VPS36-207ENST00000611132 VN1R17PQ8TDU5 208 aa12.7□□□□□ -0.38
VPS36-207ENST00000611132 ZNF253O75346 499 aa12.69□□□□□ -0.38
VPS36-207ENST00000611132 CRYAAP02489 173 aa12.69□□□□□ -0.38
VPS36-207ENST00000611132 TNFSF4P23510 183 aa12.69□□□□□ -0.38
VPS36-207ENST00000611132 GNG4P50150 75 aa12.69□□□□□ -0.38
VPS36-207ENST00000611132 CHRDL1Q9BU40 450 aa12.69□□□□□ -0.38
VPS36-207ENST00000611132 SSUH2Q9Y2M2 353 aa12.69□□□□□ -0.38
VPS36-207ENST00000611132 C5orf67F2Z3F1 127 aa12.69□□□□□ -0.38
VPS36-207ENST00000611132 SCTP09683 121 aa12.69□□□□□ -0.38
VPS36-207ENST00000611132 SRD5A2P31213 254 aa12.69□□□□□ -0.38
VPS36-207ENST00000611132 RHOBP62745 196 aa12.69□□□□□ -0.38
VPS36-207ENST00000611132 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.69□□□□□ -0.38
VPS36-207ENST00000611132 CISD2Q8N5K1 135 aaKnown RBP12.69□□□□□ -0.38
VPS36-207ENST00000611132 MPC1Q9Y5U8 109 aa12.69□□□□□ -0.38
VPS36-207ENST00000611132 OR10J4P0C629 311 aa12.69□□□□□ -0.38
VPS36-207ENST00000611132 ARL3P36405 182 aa12.69□□□□□ -0.38
VPS36-207ENST00000611132 CCL7P80098 99 aa12.69□□□□□ -0.38
VPS36-207ENST00000611132 TP53RKQ96S44 253 aa12.69□□□□□ -0.38
VPS36-207ENST00000611132 GPHA2Q96T91 129 aa12.69□□□□□ -0.38
VPS36-207ENST00000611132 LDLRAD4O15165 306 aa12.69□□□□□ -0.38
VPS36-207ENST00000611132 HLA-DRB5Q30154 266 aa12.69□□□□□ -0.38
VPS36-207ENST00000611132 HEPN1Q6WQI6 88 aa12.69□□□□□ -0.38
VPS36-207ENST00000611132 TM2D1Q9BX74 207 aa12.69□□□□□ -0.38
VPS36-207ENST00000611132 KLRC4-KLRK1H3BQV0 150 aa12.68□□□□□ -0.38
VPS36-207ENST00000611132 TOX4O94842 621 aa12.68□□□□□ -0.38
VPS36-207ENST00000611132 OR3A1P47881 315 aa12.68□□□□□ -0.38
VPS36-207ENST00000611132 PRR27Q6MZM9 219 aa12.68□□□□□ -0.38
VPS36-207ENST00000611132 SP7Q8TDD2 431 aaPredicted RBP12.68□□□□□ -0.38
VPS36-207ENST00000611132 STARD4Q96DR4 205 aa12.68□□□□□ -0.38
VPS36-207ENST00000611132 DMRTA2Q96SC8 542 aa12.68□□□□□ -0.38
VPS36-207ENST00000611132 CBLN4Q9NTU7 201 aa12.68□□□□□ -0.38
VPS36-207ENST00000611132 OCIAD1Q9NX40 245 aa12.68□□□□□ -0.38
VPS36-207ENST00000611132 ARHGEF17Q96PE2 2063 aaPredicted RBP12.68□□□□□ -0.38
VPS36-207ENST00000611132 IGHV1OR15-9A0A0B4J2B8 117 aa12.68□□□□□ -0.38
VPS36-207ENST00000611132 IGFBP7Q16270 282 aa12.68□□□□□ -0.38
VPS36-207ENST00000611132 COL5A1-AS1Q5SY13 56 aa12.68□□□□□ -0.38
VPS36-207ENST00000611132 OR5D13Q8NGL4 314 aa12.68□□□□□ -0.38
VPS36-207ENST00000611132 RFESDQ8TAC1 157 aa12.68□□□□□ -0.38
VPS36-207ENST00000611132 RPRMQ9NS64 109 aa12.68□□□□□ -0.38
VPS36-207ENST00000611132 NXPH1P58417 271 aa12.68□□□□□ -0.38
VPS36-207ENST00000611132 PAFAH1B2P68402 229 aa12.68□□□□□ -0.38
VPS36-207ENST00000611132 ASPHD2Q6ICH7 369 aa12.68□□□□□ -0.38
VPS36-207ENST00000611132 M0R1X1 148 aa12.68□□□□□ -0.38
VPS36-207ENST00000611132 CER1O95813 267 aa12.68□□□□□ -0.38
VPS36-207ENST00000611132 FABP6P51161 128 aa12.68□□□□□ -0.38
VPS36-207ENST00000611132 COX19Q49B96 90 aa12.68□□□□□ -0.38
VPS36-207ENST00000611132 TAF15Q92804 592 aaKnown RBP eCLIP12.68□□□□□ -0.38
VPS36-207ENST00000611132 ELOVL1Q9BW60 279 aa12.68□□□□□ -0.38
VPS36-207ENST00000611132 BARX1Q9HBU1 254 aaPredicted RBP12.68□□□□□ -0.38
VPS36-207ENST00000611132 CHEK1O14757 476 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 ST8SIA5O15466 376 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 HIST1H2BKO60814 126 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 FCGR3BO75015 233 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 HIST1H2BJP06899 126 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 HIST1H2BOP23527 126 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 HIST1H2BBP33778 126 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 HIST1H2BDP58876 126 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 HIST1H2BCP62807 126 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 HIST2H2BEQ16778 126 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.67□□□□□ -0.38
VPS36-207ENST00000611132 C9orf50Q5SZB4 431 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 CADM4Q8NFZ8 388 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 IFI44Q8TCB0 444 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 ABHD5Q8WTS1 349 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 HIST1H2BHQ93079 126 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 GPR146Q96CH1 333 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 HIST1H2BNQ99877 126 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 HIST1H2BMQ99879 126 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 PCED1AQ9H1Q7 454 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 RBKSQ9H477 322 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 PSG11Q9UQ72 335 aa12.67□□□□□ -0.38
VPS36-207ENST00000611132 NLRC5Q86WI3 1866 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms