RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 MMP26Q9NRE1 261 aa2.76□□□□□ -1.97
CKS1BP3-201ENST00000600888 CENPMQ9NSP4 180 aa2.76□□□□□ -1.97
CKS1BP3-201ENST00000600888 ARMC1Q9NVT9 282 aa2.76□□□□□ -1.97
CKS1BP3-201ENST00000600888 UBAP1Q9NZ09 502 aa2.76□□□□□ -1.97
CKS1BP3-201ENST00000600888 PDP1Q9P0J1 537 aaPredicted RBP2.76□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZNF319Q9P2F9 582 aa2.76□□□□□ -1.97
CKS1BP3-201ENST00000600888 KAAG1Q9UBP8 84 aa2.76□□□□□ -1.97
CKS1BP3-201ENST00000600888 NUP50Q9UKX7 468 aa2.76□□□□□ -1.97
CKS1BP3-201ENST00000600888 MPC1Q9Y5U8 109 aa2.76□□□□□ -1.97
CKS1BP3-201ENST00000600888 ETV7Q9Y603 341 aa2.76□□□□□ -1.97
CKS1BP3-201ENST00000600888 TMEM14AQ9Y6G1 99 aa2.76□□□□□ -1.97
CKS1BP3-201ENST00000600888 PKD1L1Q8TDX9 2849 aa2.76□□□□□ -1.97
CKS1BP3-201ENST00000600888 MGAM2Q2M2H8 2515 aa2.76□□□□□ -1.97
CKS1BP3-201ENST00000600888 A0A087X0K7 114 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 TRAV38-1A0A0B4J264 116 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 IGHV2-70DA0A0C4DH43 119 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 C5orf63A6NC05 138 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 GGT3PA6NGU5 568 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 TMEM210A6NLX4 147 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 ANKRD30BLA7E2S9 258 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 CLDN34H7C241 214 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 LGALS8O00214 317 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 ECDO95905 644 aaPredicted RBP2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 CST4P01036 141 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 IGLV3-1P01715 115 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 HLA-DPB1P04440 258 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 LYNP07948 512 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 MELTFP08582 738 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 H2BFMP0C1H6 154 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 RPS2P15880 293 aaKnown RBP2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 MUC1P15941 1255 aaPredicted RBP2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 HSD11B1P28845 292 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 CD80P33681 288 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 PITPNBP48739 271 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 CX3CR1P49238 355 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 DAPP51397 102 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZNF121P58317 390 aaPredicted RBP2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 GNB2P62879 340 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 RPS27AP62979 156 aaKnown RBP2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 LCN2P80188 198 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 IL5RAQ01344 420 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 SLC34A1Q06495 639 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 TMED1Q13445 227 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 EIF2B1Q14232 305 aaKnown RBP2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 PTGES3Q15185 160 aaKnown RBP2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 MPPED2Q15777 294 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 ATP6AP1Q15904 470 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 KLF17Q5JT82 389 aaPredicted RBP2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 MUC21Q5SSG8 566 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 AADACL4Q5VUY2 407 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 SLX4IPQ5VYV7 408 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 NXNL2Q5VZ03 156 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 WDR25Q64LD2 544 aaPredicted RBP2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 C12orf73Q69YU5 71 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 KDM4DQ6B0I6 523 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 PLBD1Q6P4A8 553 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 BTNL3Q6UXE8 466 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 SPATA24Q86W54 205 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 ERI1Q8IV48 349 aaKnown RBP2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 C11orf53Q8IXP5 236 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZNF679Q8IYX0 411 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 HS3ST5Q8IZT8 346 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZDHHC22Q8N966 263 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR8B3Q8NGG8 313 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR56B2PQ8NGI1 322 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR10Z1Q8NGY1 313 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR2AE1Q8NHA4 323 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 THEM6Q8WUY1 208 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 ASB17Q8WXJ9 295 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 C12orf43Q96C57 262 aaKnown RBP2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 REEP6Q96HR9 211 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 RCHY1Q96PM5 261 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR8B4Q96RC9 309 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR8B2Q96RD0 313 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 AMELYQ99218 206 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 TEAD3Q99594 435 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 ADAT1Q9BUB4 502 aaKnown RBP2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 PRRG3Q9BZD7 231 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 DNTTIP1Q9H147 329 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR51V1Q9H2C8 321 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 ERVK-18Q9QC07 812 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 CLN8Q9UBY8 286 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR5V1Q9UGF6 321 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 ENOPH1Q9UHY7 261 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 SPATA2Q9UM82 520 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 WNK1Q9H4A3 2382 aa2.75□□□□□ -1.97
CKS1BP3-201ENST00000600888 CCDC182A6NF36 153 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR5B21A6NL26 309 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 DHRS7CA6NNS2 312 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZNF879B4DU55 563 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 G3V2T6 193 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 SYT7O43581 403 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 ENSAO43768 121 aaKnown RBP2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 SLC2A1P11166 492 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 PRTN3P24158 256 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 FASP25445 335 aa2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 NAA10P41227 235 aaPredicted RBP2.74□□□□□ -1.97
CKS1BP3-201ENST00000600888 TGM4P49221 684 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms