RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 RCC1P18754 421 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-202ENST00000593764 CHATP28329 748 aa14.78□□□□□ -0.04
SHKBP1-202ENST00000593764 ARHGDIBP52566 201 aa14.78□□□□□ -0.04
SHKBP1-202ENST00000593764 RPS27AP62979 156 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-202ENST00000593764 MADCAM1Q13477 382 aa14.78□□□□□ -0.04
SHKBP1-202ENST00000593764 HERPUD1Q15011 391 aa14.78□□□□□ -0.04
SHKBP1-202ENST00000593764 HIST2H2BDQ6DRA6 164 aa14.78□□□□□ -0.04
SHKBP1-202ENST00000593764 ZNF367Q7RTV3 350 aa14.78□□□□□ -0.04
SHKBP1-202ENST00000593764 C16orf82Q7Z2V1 217 aa14.78□□□□□ -0.04
SHKBP1-202ENST00000593764 OR6M1Q8NGM8 313 aa14.78□□□□□ -0.04
SHKBP1-202ENST00000593764 KCNG3Q8TAE7 436 aa14.78□□□□□ -0.04
SHKBP1-202ENST00000593764 WIPF2Q8TF74 440 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-202ENST00000593764 TOMM40LQ969M1 308 aa14.78□□□□□ -0.04
SHKBP1-202ENST00000593764 TM2D1Q9BX74 207 aa14.78□□□□□ -0.04
SHKBP1-202ENST00000593764 LIN7BQ9HAP6 207 aa14.78□□□□□ -0.04
SHKBP1-202ENST00000593764 MBNL3Q9NUK0 354 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-202ENST00000593764 AK6Q9Y3D8 172 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-202ENST00000593764 IGHV3-43A0A0B4J1X8 118 aa14.77□□□□□ -0.05
SHKBP1-202ENST00000593764 A0A1W2PPI3 338 aa14.77□□□□□ -0.05
SHKBP1-202ENST00000593764 H3BUI4 141 aa14.77□□□□□ -0.05
SHKBP1-202ENST00000593764 ARL6IP5O75915 188 aa14.77□□□□□ -0.05
SHKBP1-202ENST00000593764 BPNT1O95861 308 aa14.77□□□□□ -0.05
SHKBP1-202ENST00000593764 AMY1AP04745 511 aa14.77□□□□□ -0.05
SHKBP1-202ENST00000593764 AMY2AP04746 511 aa14.77□□□□□ -0.05
SHKBP1-202ENST00000593764 IGHV3-43DP0DP04 118 aa14.77□□□□□ -0.05
SHKBP1-202ENST00000593764 VSIG10L2P0DP72 767 aa14.77□□□□□ -0.05
SHKBP1-202ENST00000593764 MNDAP41218 407 aa14.77□□□□□ -0.05
SHKBP1-202ENST00000593764 GABARAPL2P60520 117 aa14.77□□□□□ -0.05
SHKBP1-202ENST00000593764 THNSL2Q86YJ6 484 aa14.77□□□□□ -0.05
SHKBP1-202ENST00000593764 LINC00311Q8N616 119 aa14.77□□□□□ -0.05
SHKBP1-202ENST00000593764 C8orf31Q8N9H6 132 aa14.77□□□□□ -0.05
SHKBP1-202ENST00000593764 RBM14Q96PK6 669 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-202ENST00000593764 SULT4A1Q9BR01 284 aa14.77□□□□□ -0.05
SHKBP1-202ENST00000593764 OCSTAMPQ9BR26 566 aa14.77□□□□□ -0.05
SHKBP1-202ENST00000593764 NICN1Q9BSH3 213 aa14.77□□□□□ -0.05
SHKBP1-202ENST00000593764 TMEM59Q9BXS4 323 aa14.77□□□□□ -0.05
SHKBP1-202ENST00000593764 WNT10AQ9GZT5 417 aa14.77□□□□□ -0.05
SHKBP1-202ENST00000593764 MEGF8Q7Z7M0 2845 aa14.77□□□□□ -0.05
SHKBP1-202ENST00000593764 A0A0A6YYD4 124 aa14.76□□□□□ -0.05
SHKBP1-202ENST00000593764 SLC17A2O00624 439 aa14.76□□□□□ -0.05
SHKBP1-202ENST00000593764 MRPS14O60783 128 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-202ENST00000593764 OR2F2O95006 317 aa14.76□□□□□ -0.05
SHKBP1-202ENST00000593764 HBZP02008 142 aa14.76□□□□□ -0.05
SHKBP1-202ENST00000593764 CALRP27797 417 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-202ENST00000593764 P2RY14Q15391 338 aa14.76□□□□□ -0.05
SHKBP1-202ENST00000593764 C6orf183Q5T699 404 aa14.76□□□□□ -0.05
SHKBP1-202ENST00000593764 Q6ZTK2 550 aa14.76□□□□□ -0.05
SHKBP1-202ENST00000593764 C5orf24Q7Z6I8 188 aa14.76□□□□□ -0.05
SHKBP1-202ENST00000593764 DRAM1Q8N682 238 aa14.76□□□□□ -0.05
SHKBP1-202ENST00000593764 C11orf44Q8N8P7 122 aa14.76□□□□□ -0.05
SHKBP1-202ENST00000593764 OR10X1Q8NGY0 326 aa14.76□□□□□ -0.05
SHKBP1-202ENST00000593764 OR1L1Q8NH94 360 aa14.76□□□□□ -0.05
SHKBP1-202ENST00000593764 MRPL30Q8TCC3 161 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-202ENST00000593764 NEDD4LQ96PU5 975 aa14.76□□□□□ -0.05
SHKBP1-202ENST00000593764 SLC25A33Q9BSK2 321 aa14.76□□□□□ -0.05
SHKBP1-202ENST00000593764 SPINT2O43291 252 aa14.75□□□□□ -0.05
SHKBP1-202ENST00000593764 TSPAN15O95858 294 aa14.75□□□□□ -0.05
SHKBP1-202ENST00000593764 RAB7AP51149 207 aa14.75□□□□□ -0.05
SHKBP1-202ENST00000593764 ZNF134P52741 427 aa14.75□□□□□ -0.05
SHKBP1-202ENST00000593764 TMEM95Q3KNT9 176 aa14.75□□□□□ -0.05
SHKBP1-202ENST00000593764 NKAPLQ5M9Q1 402 aa14.75□□□□□ -0.05
SHKBP1-202ENST00000593764 CD200R1LQ6Q8B3 271 aa14.75□□□□□ -0.05
SHKBP1-202ENST00000593764 C6orf201Q7Z4U5 140 aa14.75□□□□□ -0.05
SHKBP1-202ENST00000593764 OR8H3Q8N146 312 aa14.75□□□□□ -0.05
SHKBP1-202ENST00000593764 ZNF439Q8NDP4 499 aa14.75□□□□□ -0.05
SHKBP1-202ENST00000593764 OR56B4Q8NH76 319 aa14.75□□□□□ -0.05
SHKBP1-202ENST00000593764 CAPSLQ8WWF8 208 aa14.75□□□□□ -0.05
SHKBP1-202ENST00000593764 ST6GALNAC6Q969X2 333 aa14.75□□□□□ -0.05
SHKBP1-202ENST00000593764 FAAP24Q9BTP7 215 aa14.75□□□□□ -0.05
SHKBP1-202ENST00000593764 LPAR5Q9H1C0 372 aa14.75□□□□□ -0.05
SHKBP1-202ENST00000593764 PLGRKTQ9HBL7 147 aa14.75□□□□□ -0.05
SHKBP1-202ENST00000593764 TAF9BQ9HBM6 251 aa14.75□□□□□ -0.05
SHKBP1-202ENST00000593764 NDUFB11Q9NX14 153 aa14.75□□□□□ -0.05
SHKBP1-202ENST00000593764 SHISA3A0PJX4 238 aa14.74□□□□□ -0.05
SHKBP1-202ENST00000593764 SLC31A2O15432 143 aa14.74□□□□□ -0.05
SHKBP1-202ENST00000593764 SNRNP70P08621 437 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-202ENST00000593764 FAM106CPP0CH98 169 aa14.74□□□□□ -0.05
SHKBP1-202ENST00000593764 ARSBP15848 533 aa14.74□□□□□ -0.05
SHKBP1-202ENST00000593764 ZNF816Q0VGE8 651 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-202ENST00000593764 Q3ZCU0 254 aa14.74□□□□□ -0.05
SHKBP1-202ENST00000593764 TRAT1Q6PIZ9 186 aa14.74□□□□□ -0.05
SHKBP1-202ENST00000593764 SLC25A48Q6ZT89 311 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-202ENST00000593764 OR2W3Q7Z3T1 314 aa14.74□□□□□ -0.05
SHKBP1-202ENST00000593764 SPARTQ8N0X7 666 aa14.74□□□□□ -0.05
SHKBP1-202ENST00000593764 PRR18Q8N4B5 295 aa14.74□□□□□ -0.05
SHKBP1-202ENST00000593764 FAM89BQ8N5H3 189 aa14.74□□□□□ -0.05
SHKBP1-202ENST00000593764 AKR1E2Q96JD6 320 aa14.74□□□□□ -0.05
SHKBP1-202ENST00000593764 MMP27Q9H306 513 aa14.74□□□□□ -0.05
SHKBP1-202ENST00000593764 Q9H521 79 aa14.74□□□□□ -0.05
SHKBP1-202ENST00000593764 TET2Q6N021 2002 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-202ENST00000593764 HSD17B6O14756 317 aa14.73□□□□□ -0.05
SHKBP1-202ENST00000593764 SOCS1O15524 211 aa14.73□□□□□ -0.05
SHKBP1-202ENST00000593764 BLVRBP30043 206 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-202ENST00000593764 CLDN12P56749 244 aa14.73□□□□□ -0.05
SHKBP1-202ENST00000593764 RAB11BQ15907 218 aa14.73□□□□□ -0.05
SHKBP1-202ENST00000593764 TMEM30BQ3MIR4 351 aa14.73□□□□□ -0.05
SHKBP1-202ENST00000593764 ABCA11PQ4W5N1 156 aa14.73□□□□□ -0.05
SHKBP1-202ENST00000593764 CT45A1Q5HYN5 189 aa14.73□□□□□ -0.05
SHKBP1-202ENST00000593764 UBE2UQ5VVX9 321 aa14.73□□□□□ -0.05
SHKBP1-202ENST00000593764 Q6ZPA2 131 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms