RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 OR10K2Q6IF99 312 aa10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 ZNF497Q6ZNH5 498 aa10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 SLC16A12Q6ZSM3 486 aa10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 MOB3BQ86TA1 216 aa10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 CDH26Q8IXH8 852 aa10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 OR4F17Q8NGA8 305 aa10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 OR4K15Q8NH41 348 aa10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 MRPS24Q96EL2 167 aaKnown RBP10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 OR4F4Q96R69 305 aa10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 MGLLQ99685 303 aa10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 UQCC2Q9BRT2 126 aa10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 KCNK15Q9H427 330 aa10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 ISYNA1Q9NPH2 558 aa10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 MOB4Q9Y3A3 225 aa10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 PEX16Q9Y5Y5 336 aa10.13□□□□□ -0.79
NPLOC4-213ENST00000573519 KIAA2026Q5HYC2 2103 aa10.12□□□□□ -0.79
NPLOC4-213ENST00000573519 A0A1W2PPI3 338 aa10.12□□□□□ -0.79
NPLOC4-213ENST00000573519 UBE2QL1A1L167 161 aa10.12□□□□□ -0.79
NPLOC4-213ENST00000573519 C15orf65H3BRN8 121 aa10.12□□□□□ -0.79
NPLOC4-213ENST00000573519 M0QZK8 103 aa10.12□□□□□ -0.79
NPLOC4-213ENST00000573519 CCRL2O00421 344 aa10.12□□□□□ -0.79
NPLOC4-213ENST00000573519 SPINT2O43291 252 aa10.12□□□□□ -0.79
NPLOC4-213ENST00000573519 ORC5O43913 435 aa10.12□□□□□ -0.79
NPLOC4-213ENST00000573519 CPEP16870 476 aa10.12□□□□□ -0.79
NPLOC4-213ENST00000573519 KHDC1LQ5JSQ8 128 aa10.12□□□□□ -0.79
NPLOC4-213ENST00000573519 SYT6Q5T7P8 510 aaPredicted RBP10.12□□□□□ -0.79
NPLOC4-213ENST00000573519 GLT8D1Q68CQ7 371 aa10.12□□□□□ -0.79
NPLOC4-213ENST00000573519 FAM53AQ6NSI3 398 aaPredicted RBP10.12□□□□□ -0.79
NPLOC4-213ENST00000573519 OR4X2Q8NGF9 303 aa10.12□□□□□ -0.79
NPLOC4-213ENST00000573519 WIPF2Q8TF74 440 aaPredicted RBP10.12□□□□□ -0.79
NPLOC4-213ENST00000573519 PHYHIPQ92561 330 aa10.12□□□□□ -0.79
NPLOC4-213ENST00000573519 GFOD1Q9NXC2 390 aa10.12□□□□□ -0.79
NPLOC4-213ENST00000573519 RCC2Q9P258 522 aaKnown RBP10.12□□□□□ -0.79
NPLOC4-213ENST00000573519 BLOC1S6Q9UL45 172 aa10.12□□□□□ -0.79
NPLOC4-213ENST00000573519 RRP15Q9Y3B9 282 aaKnown RBP10.12□□□□□ -0.79
NPLOC4-213ENST00000573519 IGHV3-72A0A0B4J1Y9 119 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 TCRBV4S1A1TA0A5B7 111 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 ADARB2-AS1A8MUL3 147 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 C12orf77C9JDV5 145 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 MPIG6BO95866 241 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 IGKV1D-33P01593 117 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 IGKV1-33P01594 117 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 GAPDHP04406 335 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 AMY1AP04745 511 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 AMY2AP04746 511 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 PF4V1P10720 104 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 IL3RAP26951 378 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 FABP5Q01469 135 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 TBCEQ15813 527 aaPredicted RBP10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 SSX1Q16384 188 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 NKAPLQ5M9Q1 402 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 C1orf100Q5SVJ3 147 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 C6orf183Q5T699 404 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 ZNF367Q7RTV3 350 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 THNSL2Q86YJ6 484 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 OR8H3Q8N146 312 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 OR10V1Q8NGI7 309 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 OR52M1Q8NGK5 317 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 Q96M66 194 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 GFI1Q99684 422 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 CST11Q9H112 138 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 Q9H521 79 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 RAB9BQ9NP90 201 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 ACOT13Q9NPJ3 140 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 GNG12Q9UBI6 72 aa10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 AK6Q9Y3D8 172 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-213ENST00000573519 IGHV1-3A0A0C4DH29 117 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 FAM90A10PA6NDY2 464 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 FAM90A18PA6NE21 464 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 FAM90A16PA6NEW6 464 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 FAM90A20PA6NIJ5 464 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 FAM90A7PA6NKC0 464 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 FAM90A9PA6NNJ1 464 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 FAM90A12PA8MX19 464 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 FAM90A5PA8MXJ8 464 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 FAM90A23PA8MXZ1 464 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 DENRO43583 198 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 HBZP02008 142 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 FAM90A15PP0C7V4 464 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 FAM90A13PP0C7W8 464 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 FAM90A14PP0C7W9 464 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 FAM90A24PP0C7X0 464 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 VSIG8P0DPA2 414 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 FUT3P21217 361 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 CALRP27797 417 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 LOXL3P58215 753 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 ZNF816Q0VGE8 651 aaPredicted RBP10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 P2RY14Q15391 338 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 SIGIRRQ6IA17 410 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 C10orf99Q6UWK7 81 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 OR1L1Q8NH94 360 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 KCNIP1Q9NZI2 227 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 GHRLQ9UBU3 117 aa10.1□□□□□ -0.79
NPLOC4-213ENST00000573519 NCBP2LA6PVI3 153 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-213ENST00000573519 SLC22A1O15245 554 aa10.09□□□□□ -0.79
NPLOC4-213ENST00000573519 SLC31A2O15432 143 aa10.09□□□□□ -0.79
NPLOC4-213ENST00000573519 PDCD6O75340 191 aa10.09□□□□□ -0.79
NPLOC4-213ENST00000573519 PRB2P02812 416 aaPredicted RBP10.09□□□□□ -0.79
NPLOC4-213ENST00000573519 UBBP0CG47 229 aa10.09□□□□□ -0.79
NPLOC4-213ENST00000573519 RCC1P18754 421 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms