RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 RNF152Q8N8N0 203 aa12.12□□□□□ -0.47
NME3-211ENST00000568561 OR13C5Q8NGS8 318 aa12.12□□□□□ -0.47
NME3-211ENST00000568561 TMEM106AQ96A25 262 aa12.12□□□□□ -0.47
NME3-211ENST00000568561 IFT22Q9H7X7 185 aa12.12□□□□□ -0.47
NME3-211ENST00000568561 TENM2Q9NT68 2774 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 MAGEA13PA6NCF6 341 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 C12orf77C9JDV5 145 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 ANKRD65E5RJM6 399 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 H3BNX3 289 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 AIPO00170 330 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 LY86O95711 162 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 IGHG4P01861 327 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 CD2P06729 351 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 LIMS3P0CW19 117 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 LIMS4P0CW20 117 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 CD1BP29016 333 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 SOX6P35712 828 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 ZNF93P35789 620 aaPredicted RBP12.11□□□□□ -0.47
NME3-211ENST00000568561 MRPL28Q13084 256 aaKnown RBP12.11□□□□□ -0.47
NME3-211ENST00000568561 FHL3Q13643 280 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 NHLRC3Q5JS37 347 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 PRR18Q8N4B5 295 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 ZNF439Q8NDP4 499 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 OR11H1Q8NG94 326 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 OR52M1Q8NGK5 317 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 GPR148Q8TDV2 347 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 C4orf3Q8WVX3 66 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 KCTD7Q96MP8 289 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 OR5B12Q96R08 314 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 GNB4Q9HAV0 340 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 IL36GQ9NZH8 169 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 GNG12Q9UBI6 72 aa12.11□□□□□ -0.47
NME3-211ENST00000568561 MT-ND4P03905 459 aa12.1□□□□□ -0.47
NME3-211ENST00000568561 PSMB8P28062 276 aa12.1□□□□□ -0.47
NME3-211ENST00000568561 ZNF134P52741 427 aa12.1□□□□□ -0.47
NME3-211ENST00000568561 PPP3R1P63098 170 aa12.1□□□□□ -0.47
NME3-211ENST00000568561 RAB40BQ12829 278 aa12.1□□□□□ -0.47
NME3-211ENST00000568561 SLC22A6Q4U2R8 563 aa12.1□□□□□ -0.47
NME3-211ENST00000568561 ASPHD1Q5U4P2 390 aa12.1□□□□□ -0.47
NME3-211ENST00000568561 ZNF497Q6ZNH5 498 aa12.1□□□□□ -0.47
NME3-211ENST00000568561 C8orf31Q8N9H6 132 aa12.1□□□□□ -0.47
NME3-211ENST00000568561 OR4K15Q8NH41 348 aa12.1□□□□□ -0.47
NME3-211ENST00000568561 OR1L1Q8NH94 360 aa12.1□□□□□ -0.47
NME3-211ENST00000568561 RHOXF1Q8NHV9 184 aa12.1□□□□□ -0.47
NME3-211ENST00000568561 APH1BQ8WW43 257 aa12.1□□□□□ -0.47
NME3-211ENST00000568561 MYCBPQ99417 103 aaPredicted RBP12.1□□□□□ -0.47
NME3-211ENST00000568561 S100A13Q99584 98 aa12.1□□□□□ -0.47
NME3-211ENST00000568561 KLK15Q9H2R5 256 aa12.1□□□□□ -0.47
NME3-211ENST00000568561 TMEM138Q9NPI0 162 aa12.1□□□□□ -0.47
NME3-211ENST00000568561 ZNF256Q9Y2P7 627 aaPredicted RBP12.1□□□□□ -0.47
NME3-211ENST00000568561 SIRT4Q9Y6E7 314 aaPredicted RBP12.1□□□□□ -0.47
NME3-211ENST00000568561 WSB1Q9Y6I7 421 aa12.1□□□□□ -0.47
NME3-211ENST00000568561 EPPK1P58107 5090 aaKnown RBP12.09□□□□□ -0.47
NME3-211ENST00000568561 G3V318 75 aa12.09□□□□□ -0.47
NME3-211ENST00000568561 ORC5O43913 435 aa12.09□□□□□ -0.47
NME3-211ENST00000568561 BDKRB2P30411 391 aa12.09□□□□□ -0.47
NME3-211ENST00000568561 VHLP40337 213 aa12.09□□□□□ -0.47
NME3-211ENST00000568561 SMN1Q16637 294 aaKnown RBP12.09□□□□□ -0.47
NME3-211ENST00000568561 MPV17LQ2QL34 196 aa12.09□□□□□ -0.47
NME3-211ENST00000568561 CT45A1Q5HYN5 189 aa12.09□□□□□ -0.47
NME3-211ENST00000568561 OR2G6Q5TZ20 316 aa12.09□□□□□ -0.47
NME3-211ENST00000568561 SLC25A48Q6ZT89 311 aaKnown RBP12.09□□□□□ -0.47
NME3-211ENST00000568561 C5orf24Q7Z6I8 188 aa12.09□□□□□ -0.47
NME3-211ENST00000568561 CT45A3Q8NHU0 189 aa12.09□□□□□ -0.47
NME3-211ENST00000568561 Q96MT0 163 aa12.09□□□□□ -0.47
NME3-211ENST00000568561 ZNF184Q99676 751 aaPredicted RBP12.09□□□□□ -0.47
NME3-211ENST00000568561 ZNF107Q9UII5 783 aaPredicted RBP12.09□□□□□ -0.47
NME3-211ENST00000568561 HBZP02008 142 aa12.08□□□□□ -0.48
NME3-211ENST00000568561 CNTFRP26992 372 aa12.08□□□□□ -0.48
NME3-211ENST00000568561 ETV1P50549 477 aa12.08□□□□□ -0.48
NME3-211ENST00000568561 GNB1P62873 340 aa12.08□□□□□ -0.48
NME3-211ENST00000568561 LSAMPQ13449 338 aa12.08□□□□□ -0.48
NME3-211ENST00000568561 GNMTQ14749 295 aa12.08□□□□□ -0.48
NME3-211ENST00000568561 MMDQ15546 238 aa12.08□□□□□ -0.48
NME3-211ENST00000568561 KLHL22Q53GT1 634 aa12.08□□□□□ -0.48
NME3-211ENST00000568561 SYT6Q5T7P8 510 aaPredicted RBP12.08□□□□□ -0.48
NME3-211ENST00000568561 RPL22L1Q6P5R6 122 aaKnown RBP12.08□□□□□ -0.48
NME3-211ENST00000568561 LINC00596Q86U02 117 aa12.08□□□□□ -0.48
NME3-211ENST00000568561 STX19Q8N4C7 294 aa12.08□□□□□ -0.48
NME3-211ENST00000568561 OR8H1Q8NGG4 311 aa12.08□□□□□ -0.48
NME3-211ENST00000568561 MYOZ3Q8TDC0 251 aa12.08□□□□□ -0.48
NME3-211ENST00000568561 SLC29A1Q99808 456 aa12.08□□□□□ -0.48
NME3-211ENST00000568561 ETAA1Q9NY74 926 aa12.08□□□□□ -0.48
NME3-211ENST00000568561 TRAPPC2LQ9UL33 140 aa12.08□□□□□ -0.48
NME3-211ENST00000568561 C3orf84H3BNL1 204 aa12.07□□□□□ -0.48
NME3-211ENST00000568561 SPINT2O43291 252 aa12.07□□□□□ -0.48
NME3-211ENST00000568561 TXNL1O43396 289 aa12.07□□□□□ -0.48
NME3-211ENST00000568561 LALBAP00709 142 aa12.07□□□□□ -0.48
NME3-211ENST00000568561 IGF1P05019 195 aa12.07□□□□□ -0.48
NME3-211ENST00000568561 GTF2F2P13984 249 aa12.07□□□□□ -0.48
NME3-211ENST00000568561 RCC1P18754 421 aaPredicted RBP12.07□□□□□ -0.48
NME3-211ENST00000568561 ZNF137PP52743 207 aa12.07□□□□□ -0.48
NME3-211ENST00000568561 ADARB1P78563 741 aaKnown RBP12.07□□□□□ -0.48
NME3-211ENST00000568561 RIPK1Q13546 671 aa12.07□□□□□ -0.48
NME3-211ENST00000568561 KIAA0141Q14154 515 aaPredicted RBP12.07□□□□□ -0.48
NME3-211ENST00000568561 OR1N2Q8NGR9 330 aa12.07□□□□□ -0.48
NME3-211ENST00000568561 MUL1Q969V5 352 aa12.07□□□□□ -0.48
NME3-211ENST00000568561 RITA1Q96K30 269 aa12.07□□□□□ -0.48
NME3-211ENST00000568561 PARP11Q9NR21 331 aa12.07□□□□□ -0.48
NME3-211ENST00000568561 PAK1IP1Q9NWT1 392 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms