RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 THRSPQ92748 146 aa10.7□□□□□ -0.7
USB1-205ENST00000561743 ST6GALNAC6Q969X2 333 aa10.7□□□□□ -0.7
USB1-205ENST00000561743 PHF21AQ96BD5 680 aa10.7□□□□□ -0.7
USB1-205ENST00000561743 Q96M66 194 aa10.7□□□□□ -0.7
USB1-205ENST00000561743 UQCC2Q9BRT2 126 aa10.7□□□□□ -0.7
USB1-205ENST00000561743 SELENOIQ9C0D9 397 aa10.7□□□□□ -0.7
USB1-205ENST00000561743 VCXQ9H320 206 aa10.7□□□□□ -0.7
USB1-205ENST00000561743 ETAA1Q9NY74 926 aa10.7□□□□□ -0.7
USB1-205ENST00000561743 TRAPPC2LQ9UL33 140 aa10.7□□□□□ -0.7
USB1-205ENST00000561743 ERGIC3Q9Y282 383 aa10.7□□□□□ -0.7
USB1-205ENST00000561743 PEX16Q9Y5Y5 336 aa10.7□□□□□ -0.7
USB1-205ENST00000561743 IGHV3-72A0A0B4J1Y9 119 aa10.69□□□□□ -0.7
USB1-205ENST00000561743 FAM90A10PA6NDY2 464 aa10.69□□□□□ -0.7
USB1-205ENST00000561743 FAM90A7PA6NKC0 464 aa10.69□□□□□ -0.7
USB1-205ENST00000561743 FAM90A23PA8MXZ1 464 aa10.69□□□□□ -0.7
USB1-205ENST00000561743 SLC31A2O15432 143 aa10.69□□□□□ -0.7
USB1-205ENST00000561743 CRTAPO75718 401 aaPredicted RBP10.69□□□□□ -0.7
USB1-205ENST00000561743 SC5DO75845 299 aa10.69□□□□□ -0.7
USB1-205ENST00000561743 GAPDHP04406 335 aaKnown RBP10.69□□□□□ -0.7
USB1-205ENST00000561743 CDK1P06493 297 aa10.69□□□□□ -0.7
USB1-205ENST00000561743 CD33P20138 364 aa10.69□□□□□ -0.7
USB1-205ENST00000561743 GP2P55259 537 aaKnown RBP10.69□□□□□ -0.7
USB1-205ENST00000561743 Q3ZCU0 254 aa10.69□□□□□ -0.7
USB1-205ENST00000561743 KHDC1LQ5JSQ8 128 aa10.69□□□□□ -0.7
USB1-205ENST00000561743 FAM27D1Q5T7N8 215 aa10.69□□□□□ -0.7
USB1-205ENST00000561743 RNLSQ5VYX0 342 aa10.69□□□□□ -0.7
USB1-205ENST00000561743 Q6ZPA2 131 aa10.69□□□□□ -0.7
USB1-205ENST00000561743 REC114Q7Z4M0 266 aa10.69□□□□□ -0.7
USB1-205ENST00000561743 MOB3BQ86TA1 216 aa10.69□□□□□ -0.7
USB1-205ENST00000561743 ZNF329Q86UD4 541 aa10.69□□□□□ -0.7
USB1-205ENST00000561743 IZUMO1Q8IYV9 350 aa10.69□□□□□ -0.7
USB1-205ENST00000561743 ZNF439Q8NDP4 499 aa10.69□□□□□ -0.7
USB1-205ENST00000561743 WFDC9Q8NEX5 89 aa10.69□□□□□ -0.7
USB1-205ENST00000561743 RTN4IP1Q8WWV3 396 aaPredicted RBP10.69□□□□□ -0.7
USB1-205ENST00000561743 FAM46BQ96A09 425 aa10.69□□□□□ -0.7
USB1-205ENST00000561743 NOL4LQ96MY1 436 aaPredicted RBP10.69□□□□□ -0.7
USB1-205ENST00000561743 MND1Q9BWT6 205 aa10.69□□□□□ -0.7
USB1-205ENST00000561743 NKX1-2Q9UD57 310 aaPredicted RBP10.69□□□□□ -0.7
USB1-205ENST00000561743 PSMB11A5LHX3 300 aa10.68□□□□□ -0.7
USB1-205ENST00000561743 SPINT2O43291 252 aa10.68□□□□□ -0.7
USB1-205ENST00000561743 PF4P02776 101 aa10.68□□□□□ -0.7
USB1-205ENST00000561743 IGLL1P15814 213 aa10.68□□□□□ -0.7
USB1-205ENST00000561743 RCC1P18754 421 aaPredicted RBP10.68□□□□□ -0.7
USB1-205ENST00000561743 FUT3P21217 361 aa10.68□□□□□ -0.7
USB1-205ENST00000561743 ZNF134P52741 427 aa10.68□□□□□ -0.7
USB1-205ENST00000561743 GABPB1Q06547 395 aaPredicted RBP10.68□□□□□ -0.7
USB1-205ENST00000561743 GPR50Q13585 617 aa10.68□□□□□ -0.7
USB1-205ENST00000561743 C6orf141Q5SZD1 244 aa10.68□□□□□ -0.7
USB1-205ENST00000561743 C6orf183Q5T699 404 aa10.68□□□□□ -0.7
USB1-205ENST00000561743 UNQ9370/PRO34162Q6UXP9 181 aa10.68□□□□□ -0.7
USB1-205ENST00000561743 SLC25A48Q6ZT89 311 aaKnown RBP10.68□□□□□ -0.7
USB1-205ENST00000561743 PRR18Q8N4B5 295 aa10.68□□□□□ -0.7
USB1-205ENST00000561743 Q8N6K4 173 aa10.68□□□□□ -0.7
USB1-205ENST00000561743 OR1L1Q8NH94 360 aa10.68□□□□□ -0.7
USB1-205ENST00000561743 SGCDQ92629 289 aa10.68□□□□□ -0.7
USB1-205ENST00000561743 EAF1Q96JC9 268 aaPredicted RBP10.68□□□□□ -0.7
USB1-205ENST00000561743 DCLRE1BQ9H816 532 aa10.68□□□□□ -0.7
USB1-205ENST00000561743 NECAP2Q9NVZ3 263 aa10.68□□□□□ -0.7
USB1-205ENST00000561743 LSM2Q9Y333 95 aaKnown RBP10.68□□□□□ -0.7
USB1-205ENST00000561743 DNAH3Q8TD57 4116 aa10.68□□□□□ -0.7
USB1-205ENST00000561743 UBE2QL1A1L167 161 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 PTGES3LE9PB15 166 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 CA11O75493 328 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 IGHG2P01859 326 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 HBZP02008 142 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 GLAP06280 429 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 IL3RAP26951 378 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 ZNF137PP52743 207 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 TMEM30BQ3MIR4 351 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 ACSM3Q53FZ2 586 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 CT45A1Q5HYN5 189 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 FOXB2Q5VYV0 432 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 TRAT1Q6PIZ9 186 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 SLC35E3Q7Z769 313 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 LRRTM1Q86UE6 522 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 MS4A15Q8N5U1 240 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 OR10V1Q8NGI7 309 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 CT45A3Q8NHU0 189 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 CHPT1Q8WUD6 406 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 NRG4Q8WWG1 115 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 TMED9Q9BVK6 235 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 MBNL3Q9NUK0 354 aaKnown RBP10.67□□□□□ -0.7
USB1-205ENST00000561743 GNG12Q9UBI6 72 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 GHRLQ9UBU3 117 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 LINC00527Q9UJ94 153 aa10.67□□□□□ -0.7
USB1-205ENST00000561743 LINC01548A6NM66 108 aa10.66□□□□□ -0.7
USB1-205ENST00000561743 SERPINE3A8MV23 424 aa10.66□□□□□ -0.7
USB1-205ENST00000561743 ZNF736B4DX44 427 aaPredicted RBP10.66□□□□□ -0.7
USB1-205ENST00000561743 H0YHG0 523 aa10.66□□□□□ -0.7
USB1-205ENST00000561743 PDCD6O75340 191 aa10.66□□□□□ -0.7
USB1-205ENST00000561743 VSIG8P0DPA2 414 aa10.66□□□□□ -0.7
USB1-205ENST00000561743 CD1BP29016 333 aa10.66□□□□□ -0.7
USB1-205ENST00000561743 AQP4P55087 323 aa10.66□□□□□ -0.7
USB1-205ENST00000561743 SLC35A2P78381 396 aa10.66□□□□□ -0.7
USB1-205ENST00000561743 SPHARQ15513 63 aa10.66□□□□□ -0.7
USB1-205ENST00000561743 RBM48Q5RL73 367 aaKnown RBP10.66□□□□□ -0.7
USB1-205ENST00000561743 TGIF2LXQ8IUE1 241 aa10.66□□□□□ -0.7
USB1-205ENST00000561743 Q8N9W7 124 aa10.66□□□□□ -0.7
USB1-205ENST00000561743 OR2T10Q8NGZ9 312 aa10.66□□□□□ -0.7
USB1-205ENST00000561743 MRPL30Q8TCC3 161 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms