RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 ERGIC3Q9Y282 383 aa13.64□□□□□ -0.23
GPHN-211ENST00000556020 PEX16Q9Y5Y5 336 aa13.64□□□□□ -0.23
GPHN-211ENST00000556020 UBE2QL1A1L167 161 aa13.63□□□□□ -0.23
GPHN-211ENST00000556020 SERPINE3A8MV23 424 aa13.63□□□□□ -0.23
GPHN-211ENST00000556020 C12orf77C9JDV5 145 aa13.63□□□□□ -0.23
GPHN-211ENST00000556020 IL3RAP26951 378 aa13.63□□□□□ -0.23
GPHN-211ENST00000556020 LOXL3P58215 753 aa13.63□□□□□ -0.23
GPHN-211ENST00000556020 ZNF816Q0VGE8 651 aaPredicted RBP13.63□□□□□ -0.23
GPHN-211ENST00000556020 INSL4Q14641 139 aa13.63□□□□□ -0.23
GPHN-211ENST00000556020 OR52M1Q8NGK5 317 aa13.63□□□□□ -0.23
GPHN-211ENST00000556020 FBLIM1Q8WUP2 373 aa13.63□□□□□ -0.23
GPHN-211ENST00000556020 PHF21AQ96BD5 680 aa13.63□□□□□ -0.23
GPHN-211ENST00000556020 MRPS24Q96EL2 167 aaKnown RBP13.63□□□□□ -0.23
GPHN-211ENST00000556020 RCC2Q9P258 522 aaKnown RBP13.63□□□□□ -0.23
GPHN-211ENST00000556020 GNG12Q9UBI6 72 aa13.63□□□□□ -0.23
GPHN-211ENST00000556020 NCBP2LA6PVI3 153 aaKnown RBP13.62□□□□□ -0.23
GPHN-211ENST00000556020 PTGES3LE9PB15 166 aa13.62□□□□□ -0.23
GPHN-211ENST00000556020 SLC31A2O15432 143 aa13.62□□□□□ -0.23
GPHN-211ENST00000556020 SPINT2O43291 252 aa13.62□□□□□ -0.23
GPHN-211ENST00000556020 MAPK3P27361 379 aaPredicted RBP13.62□□□□□ -0.23
GPHN-211ENST00000556020 GABPB1Q06547 395 aaPredicted RBP13.62□□□□□ -0.23
GPHN-211ENST00000556020 C6orf183Q5T699 404 aa13.62□□□□□ -0.23
GPHN-211ENST00000556020 NKAIN3Q8N8D7 197 aa13.62□□□□□ -0.23
GPHN-211ENST00000556020 OR1L1Q8NH94 360 aa13.62□□□□□ -0.23
GPHN-211ENST00000556020 TFAP2CQ92754 450 aa13.62□□□□□ -0.23
GPHN-211ENST00000556020 RBMXL1Q96E39 390 aaKnown RBP13.62□□□□□ -0.23
GPHN-211ENST00000556020 TMED9Q9BVK6 235 aa13.62□□□□□ -0.23
GPHN-211ENST00000556020 NECAP2Q9NVZ3 263 aa13.62□□□□□ -0.23
GPHN-211ENST00000556020 FKBP14Q9NWM8 211 aa13.62□□□□□ -0.23
GPHN-211ENST00000556020 HBZP02008 142 aa13.61□□□□□ -0.23
GPHN-211ENST00000556020 RCC1P18754 421 aaPredicted RBP13.61□□□□□ -0.23
GPHN-211ENST00000556020 GPR50Q13585 617 aa13.61□□□□□ -0.23
GPHN-211ENST00000556020 NKAPLQ5M9Q1 402 aa13.61□□□□□ -0.23
GPHN-211ENST00000556020 FAM27D1Q5T7N8 215 aa13.61□□□□□ -0.23
GPHN-211ENST00000556020 REC114Q7Z4M0 266 aa13.61□□□□□ -0.23
GPHN-211ENST00000556020 SLC35E3Q7Z769 313 aa13.61□□□□□ -0.23
GPHN-211ENST00000556020 CDH26Q8IXH8 852 aa13.61□□□□□ -0.23
GPHN-211ENST00000556020 LINC00311Q8N616 119 aa13.61□□□□□ -0.23
GPHN-211ENST00000556020 MRAPQ8TCY5 172 aa13.61□□□□□ -0.23
GPHN-211ENST00000556020 THRSPQ92748 146 aa13.61□□□□□ -0.23
GPHN-211ENST00000556020 EAF1Q96JC9 268 aaPredicted RBP13.61□□□□□ -0.23
GPHN-211ENST00000556020 MND1Q9BWT6 205 aa13.61□□□□□ -0.23
GPHN-211ENST00000556020 FGF16O43320 207 aa13.6□□□□□ -0.23
GPHN-211ENST00000556020 MPIG6BO95866 241 aa13.6□□□□□ -0.23
GPHN-211ENST00000556020 CD1AP06126 327 aa13.6□□□□□ -0.23
GPHN-211ENST00000556020 CDK1P06493 297 aa13.6□□□□□ -0.23
GPHN-211ENST00000556020 FUT3P21217 361 aa13.6□□□□□ -0.23
GPHN-211ENST00000556020 ACSM3Q53FZ2 586 aa13.6□□□□□ -0.23
GPHN-211ENST00000556020 RBM48Q5RL73 367 aaKnown RBP13.6□□□□□ -0.23
GPHN-211ENST00000556020 FOXB2Q5VYV0 432 aa13.6□□□□□ -0.23
GPHN-211ENST00000556020 Q6ZPA2 131 aa13.6□□□□□ -0.23
GPHN-211ENST00000556020 C5orf24Q7Z6I8 188 aa13.6□□□□□ -0.23
GPHN-211ENST00000556020 LYPD6Q86Y78 171 aa13.6□□□□□ -0.23
GPHN-211ENST00000556020 OR2T10Q8NGZ9 312 aa13.6□□□□□ -0.23
GPHN-211ENST00000556020 RTN4IP1Q8WWV3 396 aaPredicted RBP13.6□□□□□ -0.23
GPHN-211ENST00000556020 Q96M66 194 aa13.6□□□□□ -0.23
GPHN-211ENST00000556020 RAB9BQ9NP90 201 aa13.6□□□□□ -0.23
GPHN-211ENST00000556020 AURKAIP1Q9NWT8 199 aaPredicted RBP13.6□□□□□ -0.23
GPHN-211ENST00000556020 NKX1-2Q9UD57 310 aaPredicted RBP13.6□□□□□ -0.23
GPHN-211ENST00000556020 FAM90A10PA6NDY2 464 aa13.59□□□□□ -0.23
GPHN-211ENST00000556020 FAM90A7PA6NKC0 464 aa13.59□□□□□ -0.23
GPHN-211ENST00000556020 LINC01548A6NM66 108 aa13.59□□□□□ -0.23
GPHN-211ENST00000556020 FAM90A23PA8MXZ1 464 aa13.59□□□□□ -0.23
GPHN-211ENST00000556020 ZNF736B4DX44 427 aaPredicted RBP13.59□□□□□ -0.23
GPHN-211ENST00000556020 ZNF134P52741 427 aa13.59□□□□□ -0.23
GPHN-211ENST00000556020 MED22Q15528 200 aa13.59□□□□□ -0.23
GPHN-211ENST00000556020 SIGIRRQ6IA17 410 aa13.59□□□□□ -0.23
GPHN-211ENST00000556020 OR10K2Q6IF99 312 aa13.59□□□□□ -0.23
GPHN-211ENST00000556020 TGIF2LXQ8IUE1 241 aa13.59□□□□□ -0.23
GPHN-211ENST00000556020 FOXRED2Q8IWF2 684 aa13.59□□□□□ -0.23
GPHN-211ENST00000556020 IZUMO1Q8IYV9 350 aa13.59□□□□□ -0.23
GPHN-211ENST00000556020 C8orf31Q8N9H6 132 aa13.59□□□□□ -0.23
GPHN-211ENST00000556020 ZNF439Q8NDP4 499 aa13.59□□□□□ -0.23
GPHN-211ENST00000556020 WFDC9Q8NEX5 89 aa13.59□□□□□ -0.23
GPHN-211ENST00000556020 CHPT1Q8WUD6 406 aa13.59□□□□□ -0.23
GPHN-211ENST00000556020 UQCC2Q9BRT2 126 aa13.59□□□□□ -0.23
GPHN-211ENST00000556020 CST11Q9H112 138 aa13.59□□□□□ -0.23
GPHN-211ENST00000556020 TAF9BQ9HBM6 251 aa13.59□□□□□ -0.23
GPHN-211ENST00000556020 KCNIP1Q9NZI2 227 aa13.59□□□□□ -0.23
GPHN-211ENST00000556020 NUDT19A8MXV4 375 aa13.58□□□□□ -0.24
GPHN-211ENST00000556020 PDCD6O75340 191 aa13.58□□□□□ -0.24
GPHN-211ENST00000556020 SLC35A2P78381 396 aa13.58□□□□□ -0.24
GPHN-211ENST00000556020 SLC35B1P78383 322 aa13.58□□□□□ -0.24
GPHN-211ENST00000556020 EBI3Q14213 229 aa13.58□□□□□ -0.24
GPHN-211ENST00000556020 GNMTQ14749 295 aa13.58□□□□□ -0.24
GPHN-211ENST00000556020 CT45A1Q5HYN5 189 aa13.58□□□□□ -0.24
GPHN-211ENST00000556020 C6orf141Q5SZD1 244 aa13.58□□□□□ -0.24
GPHN-211ENST00000556020 TRAT1Q6PIZ9 186 aa13.58□□□□□ -0.24
GPHN-211ENST00000556020 SLC25A48Q6ZT89 311 aaKnown RBP13.58□□□□□ -0.24
GPHN-211ENST00000556020 C18orf65Q6ZTR6 163 aa13.58□□□□□ -0.24
GPHN-211ENST00000556020 MS4A15Q8N5U1 240 aa13.58□□□□□ -0.24
GPHN-211ENST00000556020 OR52L2PQ8NGH6 319 aa13.58□□□□□ -0.24
GPHN-211ENST00000556020 CT45A3Q8NHU0 189 aa13.58□□□□□ -0.24
GPHN-211ENST00000556020 ST6GALNAC6Q969X2 333 aa13.58□□□□□ -0.24
GPHN-211ENST00000556020 KCNK15Q9H427 330 aa13.58□□□□□ -0.24
GPHN-211ENST00000556020 DCLRE1BQ9H816 532 aa13.58□□□□□ -0.24
GPHN-211ENST00000556020 OR2S2Q9NQN1 319 aa13.58□□□□□ -0.24
GPHN-211ENST00000556020 SCN3BQ9NY72 215 aa13.58□□□□□ -0.24
GPHN-211ENST00000556020 H0YHG0 523 aa13.57□□□□□ -0.24
GPHN-211ENST00000556020 CA11O75493 328 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms