RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 Q6ZWC4 215 aa7.88□□□□□ -1.15
GTF2A1-203ENST00000553612 OR4A16Q8NH70 328 aa7.88□□□□□ -1.15
GTF2A1-203ENST00000553612 RBM24Q9BX46 236 aaKnown RBP7.88□□□□□ -1.15
GTF2A1-203ENST00000553612 ST20Q9HBF5 79 aa7.88□□□□□ -1.15
GTF2A1-203ENST00000553612 YTHDF2Q9Y5A9 579 aaKnown RBP7.88□□□□□ -1.15
GTF2A1-203ENST00000553612 TRGV10A0A0A0MS01 117 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 IGLC2P0DOY2 106 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 IGLC3P0DOY3 106 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 OR2M7Q8NG81 312 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 UBALD1Q8TB05 177 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 YBX2Q9Y2T7 364 aaKnown RBP7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 C1QTNF4Q9BXJ3 329 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 INSL6Q9Y581 213 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 NKX2-6A6NCS4 301 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 H7C2G1 150 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 HMGN4O00479 90 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 EVI2AP22794 236 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 NSDHLQ15738 373 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 OR2A5Q96R48 311 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 SIGLEC11Q96RL6 698 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 TMEM14AQ9Y6G1 99 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 SCN9AQ15858 1988 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 COL5A2P05997 1499 aaPredicted RBP7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 H3BTX0 84 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 DUSP11O75319 330 aaKnown RBP7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 MMP23AO75900 390 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 GPR6P46095 362 aaPredicted RBP7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 TMEM176BQ3YBM2 270 aaPredicted RBP7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 AMZ2Q86W34 360 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 GJD4Q96KN9 370 aaPredicted RBP7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 MCRIP2Q9BUT9 160 aaKnown RBP7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 SSBP4Q9BWG4 385 aaPredicted RBP7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 ACTL6BO94805 426 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 ARIH2OSQ8N7S6 290 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 PHF7Q9BWX1 381 aaPredicted RBP7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 MS4A5Q9H3V2 200 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 C20orf141Q9NUB4 165 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 TNS2Q63HR2 1409 aa7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 HEATR1Q9H583 2144 aaKnown RBP7.87□□□□□ -1.15
GTF2A1-203ENST00000553612 MRC1P22897 1456 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 hCG_38984A0A1B0GV85 526 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 OR2J3O76001 311 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 FAM157CP0CG43 387 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 HBG1P69891 147 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 HBG2P69892 147 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 LRRC10Q5BKY1 277 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 VSTM2AQ8TAG5 236 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 CTSEP14091 401 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 PRSS12P56730 875 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 EWSR1Q01844 656 aaKnown RBP eCLIP7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 RUNX2Q13950 521 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 FAM78AQ5JUQ0 283 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 C19orf48Q6RUI8 117 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 OR1L8Q8NGR8 309 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 ARPC1AQ92747 370 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 NEIL1Q96FI4 390 aaPredicted RBP7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 AQP10Q96PS8 301 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 TAAR2Q9P1P5 351 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 ANXA10Q9UJ72 324 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 SIGLEC7Q9Y286 467 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 TRAV8-1A0A0A6YYK1 113 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 C11orf94C9JXX5 98 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 APOBEC3AP31941 199 aaPredicted RBP7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 FOXL1Q12952 345 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 GAB4Q2WGN9 574 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 MRPS18AQ9NVS2 196 aaKnown RBP7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 ZNF142P52746 1687 aaPredicted RBP7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 LMX1BO60663 402 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 RHOBP62745 196 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 NRN1LQ496H8 165 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 SHISA6Q6ZSJ9 500 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 EDA2RQ9HAV5 297 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 TRAV8-6A0A0B4J262 113 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 SERINC4A6NH21 518 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 TMEM212A6NML5 194 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 PPIFP30405 207 aaKnown RBP7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 SLC25A1P53007 311 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 KLRB1Q12918 225 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 C9orf153Q5TBE3 101 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 ASCL5Q7RTU5 278 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 OR10A2Q9H208 303 aa7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 NHP2Q9NX24 153 aaKnown RBP7.86□□□□□ -1.15
GTF2A1-203ENST00000553612 B4GALT1P15291 398 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 OR8B8Q15620 311 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 GAGE13Q4V321 117 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 CA13Q8N1Q1 262 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 OR4D11Q8NGI4 311 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 OR2V1Q8NHB1 315 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 FER1L6-AS2Q96M78 137 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 PRSS16Q9NQE7 514 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 A1L4Q6 167 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 TMPRSS2O15393 492 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 SYNGR4O95473 234 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 RTL8BQ17RB0 113 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 LRRC25Q8N386 305 aaPredicted RBP7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 KCNS1Q96KK3 526 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 TRAV36DV7A0A075B6V5 113 aa7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 NPIPB15A6NHN6 443 aaPredicted RBP7.85□□□□□ -1.15
GTF2A1-203ENST00000553612 FFAR1O14842 300 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms