RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 OR4F17Q8NGA8 305 aa13.06□□□□□ -0.32
CCND1-205ENST00000542367 FAM46BQ96A09 425 aa13.06□□□□□ -0.32
CCND1-205ENST00000542367 Q96M66 194 aa13.06□□□□□ -0.32
CCND1-205ENST00000542367 OR4F4Q96R69 305 aa13.06□□□□□ -0.32
CCND1-205ENST00000542367 LSM2Q9Y333 95 aaKnown RBP13.06□□□□□ -0.32
CCND1-205ENST00000542367 MOB4Q9Y3A3 225 aa13.06□□□□□ -0.32
CCND1-205ENST00000542367 A0A1W2PRX2 142 aa13.05□□□□□ -0.32
CCND1-205ENST00000542367 UBE2QL1A1L167 161 aa13.05□□□□□ -0.32
CCND1-205ENST00000542367 C12orf77C9JDV5 145 aa13.05□□□□□ -0.32
CCND1-205ENST00000542367 CCRL2O00421 344 aa13.05□□□□□ -0.32
CCND1-205ENST00000542367 HSD17B6O14756 317 aa13.05□□□□□ -0.32
CCND1-205ENST00000542367 IGKV1D-33P01593 117 aa13.05□□□□□ -0.32
CCND1-205ENST00000542367 IGKV1-33P01594 117 aa13.05□□□□□ -0.32
CCND1-205ENST00000542367 GAPDHP04406 335 aaKnown RBP13.05□□□□□ -0.32
CCND1-205ENST00000542367 FUT3P21217 361 aa13.05□□□□□ -0.32
CCND1-205ENST00000542367 REG1BP48304 166 aa13.05□□□□□ -0.32
CCND1-205ENST00000542367 SLC35A2P78381 396 aa13.05□□□□□ -0.32
CCND1-205ENST00000542367 ZNF816Q0VGE8 651 aaPredicted RBP13.05□□□□□ -0.32
CCND1-205ENST00000542367 GPR50Q13585 617 aa13.05□□□□□ -0.32
CCND1-205ENST00000542367 TCTEX1D4Q5JR98 221 aa13.05□□□□□ -0.32
CCND1-205ENST00000542367 SIGIRRQ6IA17 410 aa13.05□□□□□ -0.32
CCND1-205ENST00000542367 MOB3BQ86TA1 216 aa13.05□□□□□ -0.32
CCND1-205ENST00000542367 LINC00311Q8N616 119 aa13.05□□□□□ -0.32
CCND1-205ENST00000542367 CYYR1Q96J86 154 aa13.05□□□□□ -0.32
CCND1-205ENST00000542367 GHRLQ9UBU3 117 aa13.05□□□□□ -0.32
CCND1-205ENST00000542367 PRKDCP78527 4128 aaKnown RBP13.04□□□□□ -0.32
CCND1-205ENST00000542367 IGHV1-3A0A0C4DH29 117 aa13.04□□□□□ -0.32
CCND1-205ENST00000542367 SPINT2O43291 252 aa13.04□□□□□ -0.32
CCND1-205ENST00000542367 CA11O75493 328 aa13.04□□□□□ -0.32
CCND1-205ENST00000542367 SC5DO75845 299 aa13.04□□□□□ -0.32
CCND1-205ENST00000542367 GLAP06280 429 aa13.04□□□□□ -0.32
CCND1-205ENST00000542367 RCC1P18754 421 aaPredicted RBP13.04□□□□□ -0.32
CCND1-205ENST00000542367 IRF3Q14653 427 aa13.04□□□□□ -0.32
CCND1-205ENST00000542367 BEAN1Q3B7T3 259 aa13.04□□□□□ -0.32
CCND1-205ENST00000542367 RBM48Q5RL73 367 aaKnown RBP13.04□□□□□ -0.32
CCND1-205ENST00000542367 C6orf183Q5T699 404 aa13.04□□□□□ -0.32
CCND1-205ENST00000542367 SAMD5Q5TGI4 173 aa13.04□□□□□ -0.32
CCND1-205ENST00000542367 GLT8D1Q68CQ7 371 aa13.04□□□□□ -0.32
CCND1-205ENST00000542367 C10orf99Q6UWK7 81 aa13.04□□□□□ -0.32
CCND1-205ENST00000542367 CEACAM19Q7Z692 300 aa13.04□□□□□ -0.32
CCND1-205ENST00000542367 LRRTM1Q86UE6 522 aa13.04□□□□□ -0.32
CCND1-205ENST00000542367 GAPTQ8N292 157 aa13.04□□□□□ -0.32
CCND1-205ENST00000542367 PRR18Q8N4B5 295 aa13.04□□□□□ -0.32
CCND1-205ENST00000542367 C8orf31Q8N9H6 132 aa13.04□□□□□ -0.32
CCND1-205ENST00000542367 CST11Q9H112 138 aa13.04□□□□□ -0.32
CCND1-205ENST00000542367 RAB9BQ9NP90 201 aa13.04□□□□□ -0.32
CCND1-205ENST00000542367 TPRKBQ9Y3C4 175 aa13.04□□□□□ -0.32
CCND1-205ENST00000542367 IGHV3-72A0A0B4J1Y9 119 aa13.03□□□□□ -0.32
CCND1-205ENST00000542367 TCRBV4S1A1TA0A5B7 111 aa13.03□□□□□ -0.32
CCND1-205ENST00000542367 SLC31A2O15432 143 aa13.03□□□□□ -0.32
CCND1-205ENST00000542367 MPIG6BO95866 241 aa13.03□□□□□ -0.32
CCND1-205ENST00000542367 HBZP02008 142 aa13.03□□□□□ -0.32
CCND1-205ENST00000542367 UBBP0CG47 229 aa13.03□□□□□ -0.32
CCND1-205ENST00000542367 SRMP19623 302 aa13.03□□□□□ -0.32
CCND1-205ENST00000542367 MYF6P23409 242 aa13.03□□□□□ -0.32
CCND1-205ENST00000542367 Q3ZCU0 254 aa13.03□□□□□ -0.32
CCND1-205ENST00000542367 HSD17B12Q53GQ0 312 aa13.03□□□□□ -0.32
CCND1-205ENST00000542367 LIPKQ5VXJ0 399 aa13.03□□□□□ -0.32
CCND1-205ENST00000542367 OR10K2Q6IF99 312 aa13.03□□□□□ -0.32
CCND1-205ENST00000542367 C5orf56Q8N8D9 126 aa13.03□□□□□ -0.32
CCND1-205ENST00000542367 OR10V1Q8NGI7 309 aa13.03□□□□□ -0.32
CCND1-205ENST00000542367 OR1L1Q8NH94 360 aa13.03□□□□□ -0.32
CCND1-205ENST00000542367 PHYHIPQ92561 330 aa13.03□□□□□ -0.32
CCND1-205ENST00000542367 ST6GALNAC6Q969X2 333 aa13.03□□□□□ -0.32
CCND1-205ENST00000542367 DUSP21Q9H596 190 aa13.03□□□□□ -0.32
CCND1-205ENST00000542367 GNG12Q9UBI6 72 aa13.03□□□□□ -0.32
CCND1-205ENST00000542367 PDCD6O75340 191 aa13.02□□□□□ -0.33
CCND1-205ENST00000542367 VSIG8P0DPA2 414 aa13.02□□□□□ -0.33
CCND1-205ENST00000542367 IL3RAP26951 378 aa13.02□□□□□ -0.33
CCND1-205ENST00000542367 ZNF134P52741 427 aa13.02□□□□□ -0.33
CCND1-205ENST00000542367 EBI3Q14213 229 aa13.02□□□□□ -0.33
CCND1-205ENST00000542367 C1orf100Q5SVJ3 147 aa13.02□□□□□ -0.33
CCND1-205ENST00000542367 TRAT1Q6PIZ9 186 aa13.02□□□□□ -0.33
CCND1-205ENST00000542367 ZNF439Q8NDP4 499 aa13.02□□□□□ -0.33
CCND1-205ENST00000542367 OR4X2Q8NGF9 303 aa13.02□□□□□ -0.33
CCND1-205ENST00000542367 RTN4IP1Q8WWV3 396 aaPredicted RBP13.02□□□□□ -0.33
CCND1-205ENST00000542367 UFD1Q92890 307 aa13.02□□□□□ -0.33
CCND1-205ENST00000542367 TMEM203Q969S6 136 aa13.02□□□□□ -0.33
CCND1-205ENST00000542367 EAF1Q96JC9 268 aaPredicted RBP13.02□□□□□ -0.33
CCND1-205ENST00000542367 TAF9BQ9HBM6 251 aa13.02□□□□□ -0.33
CCND1-205ENST00000542367 TSSC4Q9Y5U2 329 aaPredicted RBP13.02□□□□□ -0.33
CCND1-205ENST00000542367 FGF16O43320 207 aa13.01□□□□□ -0.33
CCND1-205ENST00000542367 RGS10O43665 173 aa13.01□□□□□ -0.33
CCND1-205ENST00000542367 UCHL1P09936 223 aa13.01□□□□□ -0.33
CCND1-205ENST00000542367 HSMCR30P0CW71 290 aa13.01□□□□□ -0.33
CCND1-205ENST00000542367 TMEM30BQ3MIR4 351 aa13.01□□□□□ -0.33
CCND1-205ENST00000542367 OXLD1Q5BKU9 147 aa13.01□□□□□ -0.33
CCND1-205ENST00000542367 CT45A1Q5HYN5 189 aa13.01□□□□□ -0.33
CCND1-205ENST00000542367 NKAPLQ5M9Q1 402 aa13.01□□□□□ -0.33
CCND1-205ENST00000542367 SLC25A48Q6ZT89 311 aaKnown RBP13.01□□□□□ -0.33
CCND1-205ENST00000542367 C5orf24Q7Z6I8 188 aa13.01□□□□□ -0.33
CCND1-205ENST00000542367 CT45A3Q8NHU0 189 aa13.01□□□□□ -0.33
CCND1-205ENST00000542367 MRPL30Q8TCC3 161 aaKnown RBP13.01□□□□□ -0.33
CCND1-205ENST00000542367 ANKRD60Q9BZ19 345 aa13.01□□□□□ -0.33
CCND1-205ENST00000542367 CCDC90BQ9GZT6 254 aa13.01□□□□□ -0.33
CCND1-205ENST00000542367 OR2S2Q9NQN1 319 aa13.01□□□□□ -0.33
CCND1-205ENST00000542367 MBNL3Q9NUK0 354 aaKnown RBP13.01□□□□□ -0.33
CCND1-205ENST00000542367 KCNIP1Q9NZI2 227 aa13.01□□□□□ -0.33
CCND1-205ENST00000542367 PSMB11A5LHX3 300 aa13□□□□□ -0.33
CCND1-205ENST00000542367 NCBP2LA6PVI3 153 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms