RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 PLA2G2CQ5R387 149 aa12.61□□□□□ -0.39
DDX55-209ENST00000542286 ZNF818PQ6ZRF7 136 aa12.61□□□□□ -0.39
DDX55-209ENST00000542286 DECR2Q9NUI1 292 aa12.61□□□□□ -0.39
DDX55-209ENST00000542286 RCL1Q9Y2P8 373 aaKnown RBP12.61□□□□□ -0.39
DDX55-209ENST00000542286 KCNIP3Q9Y2W7 256 aa12.61□□□□□ -0.39
DDX55-209ENST00000542286 MRPS18CQ9Y3D5 142 aaKnown RBP12.61□□□□□ -0.39
DDX55-209ENST00000542286 NKX2-6A6NCS4 301 aa12.61□□□□□ -0.39
DDX55-209ENST00000542286 BTBD17A6NE02 478 aa12.61□□□□□ -0.39
DDX55-209ENST00000542286 ZNF727A8MUV8 499 aa12.61□□□□□ -0.39
DDX55-209ENST00000542286 NKX2-8O15522 239 aa12.61□□□□□ -0.39
DDX55-209ENST00000542286 DANCRP0C864 163 aa12.61□□□□□ -0.39
DDX55-209ENST00000542286 ZNF883P0CG24 379 aa12.61□□□□□ -0.39
DDX55-209ENST00000542286 PPA1Q15181 289 aa12.61□□□□□ -0.39
DDX55-209ENST00000542286 ZNF674Q2M3X9 581 aa12.61□□□□□ -0.39
DDX55-209ENST00000542286 GFI1BQ5VTD9 330 aa12.61□□□□□ -0.39
DDX55-209ENST00000542286 MDP1Q86V88 176 aa12.61□□□□□ -0.39
DDX55-209ENST00000542286 GPR87Q9BY21 358 aa12.61□□□□□ -0.39
DDX55-209ENST00000542286 GPR61Q9BZJ8 451 aa12.61□□□□□ -0.39
DDX55-209ENST00000542286 SEC14L6B5MCN3 397 aa12.6□□□□□ -0.39
DDX55-209ENST00000542286 ARG2P78540 354 aa12.6□□□□□ -0.39
DDX55-209ENST00000542286 RTL6Q6ICC9 239 aa12.6□□□□□ -0.39
DDX55-209ENST00000542286 GAPTQ8N292 157 aa12.6□□□□□ -0.39
DDX55-209ENST00000542286 ZNF610Q8N9Z0 462 aa12.6□□□□□ -0.39
DDX55-209ENST00000542286 HSD17B11Q8NBQ5 300 aa12.6□□□□□ -0.39
DDX55-209ENST00000542286 MOB3AQ96BX8 217 aa12.6□□□□□ -0.39
DDX55-209ENST00000542286 MUCL1Q96DR8 90 aa12.6□□□□□ -0.39
DDX55-209ENST00000542286 LURAP1Q96LR2 239 aa12.6□□□□□ -0.39
DDX55-209ENST00000542286 CCL28Q9NRJ3 127 aa12.6□□□□□ -0.39
DDX55-209ENST00000542286 LUZP4Q9P127 313 aa12.6□□□□□ -0.39
DDX55-209ENST00000542286 ABI3Q9P2A4 366 aa12.6□□□□□ -0.39
DDX55-209ENST00000542286 LYZL6O75951 148 aa12.6□□□□□ -0.39
DDX55-209ENST00000542286 PKIAP61925 76 aa12.6□□□□□ -0.39
DDX55-209ENST00000542286 SLC10A1Q14973 349 aa12.6□□□□□ -0.39
DDX55-209ENST00000542286 FBXW12Q6X9E4 464 aa12.6□□□□□ -0.39
DDX55-209ENST00000542286 LIAT1Q6ZQX7 453 aa12.6□□□□□ -0.39
DDX55-209ENST00000542286 IL1F10Q8WWZ1 152 aa12.6□□□□□ -0.39
DDX55-209ENST00000542286 PRH1P02810 166 aa12.59□□□□□ -0.39
DDX55-209ENST00000542286 CLN3Q13286 438 aa12.59□□□□□ -0.39
DDX55-209ENST00000542286 SOHLH1Q5JUK2 328 aa12.59□□□□□ -0.39
DDX55-209ENST00000542286 FAM53AQ6NSI3 398 aaPredicted RBP12.59□□□□□ -0.39
DDX55-209ENST00000542286 TBC1D26Q86UD7 250 aa12.59□□□□□ -0.39
DDX55-209ENST00000542286 MDS2Q8NDY4 140 aa12.59□□□□□ -0.39
DDX55-209ENST00000542286 APOBEC3DQ96AK3 386 aaPredicted RBP12.59□□□□□ -0.39
DDX55-209ENST00000542286 MISP3Q96FF7 219 aa12.59□□□□□ -0.39
DDX55-209ENST00000542286 C19orf12Q9NSK7 152 aa12.59□□□□□ -0.39
DDX55-209ENST00000542286 TUBD1Q9UJT1 453 aa12.59□□□□□ -0.39
DDX55-209ENST00000542286 KALRNO60229 2985 aa12.59□□□□□ -0.39
DDX55-209ENST00000542286 ROS1P08922 2347 aa12.59□□□□□ -0.39
DDX55-209ENST00000542286 C21orf140B9A014 251 aa12.59□□□□□ -0.39
DDX55-209ENST00000542286 TSTD3H0UI37 97 aa12.59□□□□□ -0.39
DDX55-209ENST00000542286 TRAPPC2LH3BP13 241 aa12.59□□□□□ -0.39
DDX55-209ENST00000542286 RPL36A-HNRNPH2H7BZ11 118 aa12.59□□□□□ -0.39
DDX55-209ENST00000542286 SOD3P08294 240 aa12.59□□□□□ -0.39
DDX55-209ENST00000542286 SPCS3P61009 180 aa12.59□□□□□ -0.39
DDX55-209ENST00000542286 CEACAM21Q3KPI0 293 aa12.59□□□□□ -0.39
DDX55-209ENST00000542286 GALNT14Q96FL9 552 aa12.59□□□□□ -0.39
DDX55-209ENST00000542286 PBDC1Q9BVG4 233 aa12.59□□□□□ -0.39
DDX55-209ENST00000542286 IL36GQ9NZH8 169 aa12.59□□□□□ -0.39
DDX55-209ENST00000542286 INTS1Q8N201 2190 aaKnown RBP12.59□□□□□ -0.39
DDX55-209ENST00000542286 SPAARA0A1B0GVQ0 90 aa12.58□□□□□ -0.39
DDX55-209ENST00000542286 PPP1R2P9O14990 202 aa12.58□□□□□ -0.39
DDX55-209ENST00000542286 HIST1H2BKO60814 126 aa12.58□□□□□ -0.39
DDX55-209ENST00000542286 HIST1H2BJP06899 126 aa12.58□□□□□ -0.39
DDX55-209ENST00000542286 HIST1H2BOP23527 126 aa12.58□□□□□ -0.39
DDX55-209ENST00000542286 HIST1H2BBP33778 126 aa12.58□□□□□ -0.39
DDX55-209ENST00000542286 CEBPDP49716 269 aaPredicted RBP12.58□□□□□ -0.39
DDX55-209ENST00000542286 IDH3GP51553 393 aaPredicted RBP12.58□□□□□ -0.39
DDX55-209ENST00000542286 CCL11P51671 97 aa12.58□□□□□ -0.39
DDX55-209ENST00000542286 HIST1H2BDP58876 126 aa12.58□□□□□ -0.39
DDX55-209ENST00000542286 HIST1H2BCP62807 126 aa12.58□□□□□ -0.39
DDX55-209ENST00000542286 HIST2H2BEQ16778 126 aa12.58□□□□□ -0.39
DDX55-209ENST00000542286 KHDC3LQ587J8 217 aa12.58□□□□□ -0.39
DDX55-209ENST00000542286 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.58□□□□□ -0.39
DDX55-209ENST00000542286 ZNF343Q6P1L6 599 aa12.58□□□□□ -0.39
DDX55-209ENST00000542286 CXorf67Q86X51 503 aaPredicted RBP12.58□□□□□ -0.39
DDX55-209ENST00000542286 HIST1H2BHQ93079 126 aa12.58□□□□□ -0.39
DDX55-209ENST00000542286 C18orf12Q96KH6 178 aa12.58□□□□□ -0.39
DDX55-209ENST00000542286 HIST1H2BNQ99877 126 aa12.58□□□□□ -0.39
DDX55-209ENST00000542286 HIST1H2BMQ99879 126 aa12.58□□□□□ -0.39
DDX55-209ENST00000542286 LINC00470Q9BZP3 86 aa12.58□□□□□ -0.39
DDX55-209ENST00000542286 PTPRZ1P23471 2315 aaPredicted RBP12.58□□□□□ -0.4
DDX55-209ENST00000542286 C3orf85A0A1B0GTC6 90 aa12.58□□□□□ -0.4
DDX55-209ENST00000542286 FAM24AA6NFZ4 105 aa12.58□□□□□ -0.4
DDX55-209ENST00000542286 WT1P19544 449 aaPredicted RBP12.58□□□□□ -0.4
DDX55-209ENST00000542286 CXorf66Q5JRM2 361 aaPredicted RBP12.58□□□□□ -0.4
DDX55-209ENST00000542286 ALKBH2Q6NS38 261 aa12.58□□□□□ -0.4
DDX55-209ENST00000542286 SUMF2Q8NBJ7 301 aa12.58□□□□□ -0.4
DDX55-209ENST00000542286 ZNF391Q9UJN7 358 aa12.58□□□□□ -0.4
DDX55-209ENST00000542286 URGCP-MRPS24S4R325 110 aa12.58□□□□□ -0.4
DDX55-209ENST00000542286 MPPED1O15442 326 aa12.58□□□□□ -0.4
DDX55-209ENST00000542286 CXCL1P09341 107 aa12.58□□□□□ -0.4
DDX55-209ENST00000542286 SEC11BP0C7V7 166 aa12.58□□□□□ -0.4
DDX55-209ENST00000542286 FGF12P61328 243 aa12.58□□□□□ -0.4
DDX55-209ENST00000542286 PLP2Q04941 152 aa12.58□□□□□ -0.4
DDX55-209ENST00000542286 ZNF766Q5HY98 468 aa12.58□□□□□ -0.4
DDX55-209ENST00000542286 HIST3H2BBQ8N257 126 aa12.58□□□□□ -0.4
DDX55-209ENST00000542286 Q8WTZ3 238 aa12.58□□□□□ -0.4
DDX55-209ENST00000542286 WDYHV1Q96HA8 205 aa12.58□□□□□ -0.4
DDX55-209ENST00000542286 RARRES2Q99969 163 aa12.58□□□□□ -0.4
DDX55-209ENST00000542286 Q9N2K0 584 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms