RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 KITLGP21583 273 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 DVL1P1P54792 670 aaPredicted RBP15.15■□□□□ 0.02
GNE-204ENST00000539208 VAMP2P63027 116 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 ZNF266Q14584 549 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 C1orf174Q8IYL3 243 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 CXXC4Q9H2H0 198 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 CACFD1Q9UGQ2 172 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 FAM96BQ9Y3D0 163 aa15.15■□□□□ 0.02
GNE-204ENST00000539208 MLNRO43193 412 aa15.14■□□□□ 0.01
GNE-204ENST00000539208 SSSCA1O60232 199 aa15.14■□□□□ 0.01
GNE-204ENST00000539208 WDR1O75083 606 aa15.14■□□□□ 0.01
GNE-204ENST00000539208 SNAPINO95295 136 aa15.14■□□□□ 0.01
GNE-204ENST00000539208 IGLV1-44P01699 117 aa15.14■□□□□ 0.01
GNE-204ENST00000539208 FOXF2Q12947 444 aa15.14■□□□□ 0.01
GNE-204ENST00000539208 C11orf53Q8IXP5 236 aa15.14■□□□□ 0.01
GNE-204ENST00000539208 TMEM252Q8N6L7 170 aa15.14■□□□□ 0.01
GNE-204ENST00000539208 BCL2L14Q9BZR8 327 aa15.14■□□□□ 0.01
GNE-204ENST00000539208 DKK4Q9UBT3 224 aa15.14■□□□□ 0.01
GNE-204ENST00000539208 TINAGQ9UJW2 476 aa15.14■□□□□ 0.01
GNE-204ENST00000539208 HAND1O96004 215 aa15.14■□□□□ 0.01
GNE-204ENST00000539208 SERPINE2P07093 398 aa15.14■□□□□ 0.01
GNE-204ENST00000539208 BAXQ07812 192 aa15.14■□□□□ 0.01
GNE-204ENST00000539208 P2RY6Q15077 328 aa15.14■□□□□ 0.01
GNE-204ENST00000539208 ZADH2Q8N4Q0 377 aa15.14■□□□□ 0.01
GNE-204ENST00000539208 FAM169BQ8N8A8 192 aa15.14■□□□□ 0.01
GNE-204ENST00000539208 RNF115Q9Y4L5 304 aa15.14■□□□□ 0.01
GNE-204ENST00000539208 PTPRBP23467 1997 aa15.13■□□□□ 0.01
GNE-204ENST00000539208 PROB1E7EW31 1015 aa15.13■□□□□ 0.01
GNE-204ENST00000539208 TNFSF13O75888 250 aa15.13■□□□□ 0.01
GNE-204ENST00000539208 TSPAN15O95858 294 aa15.13■□□□□ 0.01
GNE-204ENST00000539208 CGAP01215 116 aa15.13■□□□□ 0.01
GNE-204ENST00000539208 OR8U9P0C7N5 309 aa15.13■□□□□ 0.01
GNE-204ENST00000539208 CECR9P0C854 216 aa15.13■□□□□ 0.01
GNE-204ENST00000539208 IGFL3Q6UXB1 125 aa15.13■□□□□ 0.01
GNE-204ENST00000539208 CLRN3Q8NCR9 226 aa15.13■□□□□ 0.01
GNE-204ENST00000539208 OR8U1Q8NH10 309 aa15.13■□□□□ 0.01
GNE-204ENST00000539208 LSM10Q969L4 123 aaKnown RBP15.13■□□□□ 0.01
GNE-204ENST00000539208 TAAR6Q96RI8 345 aa15.13■□□□□ 0.01
GNE-204ENST00000539208 MAGT1Q9H0U3 335 aa15.13■□□□□ 0.01
GNE-204ENST00000539208 ZNF71Q9NQZ8 489 aaPredicted RBP15.13■□□□□ 0.01
GNE-204ENST00000539208 FAM157AC9JC47 383 aa15.12■□□□□ 0.01
GNE-204ENST00000539208 PSG2P11465 335 aa15.12■□□□□ 0.01
GNE-204ENST00000539208 ID4P47928 161 aa15.12■□□□□ 0.01
GNE-204ENST00000539208 CXorf67Q86X51 503 aaPredicted RBP15.12■□□□□ 0.01
GNE-204ENST00000539208 STARD4Q96DR4 205 aa15.12■□□□□ 0.01
GNE-204ENST00000539208 PROCRQ9UNN8 238 aa15.12■□□□□ 0.01
GNE-204ENST00000539208 TRAV39A0A0B4J263 110 aa15.12■□□□□ 0.01
GNE-204ENST00000539208 A0A1B0GWJ7 208 aa15.12■□□□□ 0.01
GNE-204ENST00000539208 HSPA12AO43301 675 aa15.12■□□□□ 0.01
GNE-204ENST00000539208 H2AFB1P0C5Y9 115 aa15.12■□□□□ 0.01
GNE-204ENST00000539208 SFTA3P0C7M3 94 aa15.12■□□□□ 0.01
GNE-204ENST00000539208 SNCAP37840 140 aa15.12■□□□□ 0.01
GNE-204ENST00000539208 EIF2S3P41091 472 aaKnown RBP15.12■□□□□ 0.01
GNE-204ENST00000539208 CD200P41217 278 aa15.12■□□□□ 0.01
GNE-204ENST00000539208 CAMLGP49069 296 aa15.12■□□□□ 0.01
GNE-204ENST00000539208 MBNL2Q5VZF2 373 aaKnown RBP15.12■□□□□ 0.01
GNE-204ENST00000539208 ZNF610Q8N9Z0 462 aa15.12■□□□□ 0.01
GNE-204ENST00000539208 HSD17B11Q8NBQ5 300 aa15.12■□□□□ 0.01
GNE-204ENST00000539208 OR51H1Q8NH63 302 aa15.12■□□□□ 0.01
GNE-204ENST00000539208 PRR7Q8TB68 274 aa15.12■□□□□ 0.01
GNE-204ENST00000539208 GPR146Q96CH1 333 aa15.12■□□□□ 0.01
GNE-204ENST00000539208 SH3BGRL3Q9H299 93 aa15.12■□□□□ 0.01
GNE-204ENST00000539208 TMEM30CPA0ZSE6 113 aa15.11■□□□□ 0.01
GNE-204ENST00000539208 MBD3L4A6NDZ8 208 aaPredicted RBP15.11■□□□□ 0.01
GNE-204ENST00000539208 MBD3L3A6NE82 208 aaPredicted RBP15.11■□□□□ 0.01
GNE-204ENST00000539208 MBD3L5A6NJ08 208 aaPredicted RBP15.11■□□□□ 0.01
GNE-204ENST00000539208 CHST1O43916 411 aa15.11■□□□□ 0.01
GNE-204ENST00000539208 TMEM50AO95807 157 aa15.11■□□□□ 0.01
GNE-204ENST00000539208 CD80P33681 288 aa15.11■□□□□ 0.01
GNE-204ENST00000539208 ZNF718Q3SXZ3 478 aa15.11■□□□□ 0.01
GNE-204ENST00000539208 SMUG1Q53HV7 270 aa15.11■□□□□ 0.01
GNE-204ENST00000539208 DHRS7BQ6IAN0 325 aaPredicted RBP15.11■□□□□ 0.01
GNE-204ENST00000539208 SLC35E4Q6ICL7 350 aa15.11■□□□□ 0.01
GNE-204ENST00000539208 ODF3L1Q8IXM7 274 aa15.11■□□□□ 0.01
GNE-204ENST00000539208 MBD3L2Q8NHZ7 208 aaPredicted RBP15.11■□□□□ 0.01
GNE-204ENST00000539208 C19orf12Q9NSK7 152 aa15.11■□□□□ 0.01
GNE-204ENST00000539208 CELSR3Q9NYQ7 3312 aa15.11■□□□□ 0.01
GNE-204ENST00000539208 CACNA1GO43497 2377 aa15.11■□□□□ 0.01
GNE-204ENST00000539208 A0A0G2JRQ6 117 aa15.11■□□□□ 0.01
GNE-204ENST00000539208 KIAA1324LA8MWY0 1029 aaPredicted RBP15.11■□□□□ 0.01
GNE-204ENST00000539208 TOR1AO14656 332 aa15.11■□□□□ 0.01
GNE-204ENST00000539208 AGPAT2O15120 278 aa15.11■□□□□ 0.01
GNE-204ENST00000539208 PAX9P55771 341 aa15.11■□□□□ 0.01
GNE-204ENST00000539208 MIDNQ504T8 468 aa15.11■□□□□ 0.01
GNE-204ENST00000539208 KCNIP1Q9NZI2 227 aa15.11■□□□□ 0.01
GNE-204ENST00000539208 ZNF318Q5VUA4 2279 aa15.11■□□□□ 0.01
GNE-204ENST00000539208 WRBO00258 174 aa15.1■□□□□ 0.01
GNE-204ENST00000539208 PSPNO60542 156 aa15.1■□□□□ 0.01
GNE-204ENST00000539208 CEACAM6P40199 344 aa15.1■□□□□ 0.01
GNE-204ENST00000539208 ACP7Q6ZNF0 438 aa15.1■□□□□ 0.01
GNE-204ENST00000539208 PRR18Q8N4B5 295 aa15.1■□□□□ 0.01
GNE-204ENST00000539208 TMEM171Q8WVE6 324 aa15.1■□□□□ 0.01
GNE-204ENST00000539208 SCRT1Q9BWW7 348 aa15.1■□□□□ 0.01
GNE-204ENST00000539208 TOLLIPQ9H0E2 274 aa15.1■□□□□ 0.01
GNE-204ENST00000539208 PARP12Q9H0J9 701 aaKnown RBP15.1■□□□□ 0.01
GNE-204ENST00000539208 LIN7CQ9NUP9 197 aaKnown RBP15.1■□□□□ 0.01
GNE-204ENST00000539208 IGHV2OR16-5A0A0B4J2B6 119 aa15.09■□□□□ 0.01
GNE-204ENST00000539208 IGHV1-18A0A0C4DH31 117 aa15.09■□□□□ 0.01
GNE-204ENST00000539208 OR5H1A6NKK0 313 aa15.09■□□□□ 0.01
GNE-204ENST00000539208 UMAD1C9J7I0 102 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 810 ms